RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
CDR2-206ENST00000567406 CUL7Q14999 1698 aa26.54■■□□□ 1.84
CDR2-206ENST00000567406 KIAA0586Q9BVV6 1533 aa26.53■■□□□ 1.84
CDR2-206ENST00000567406 CARMIL1Q5VZK9 1371 aa26.52■■□□□ 1.84
CDR2-206ENST00000567406 TTBK1Q5TCY1 1321 aaPredicted RBP26.46■■□□□ 1.83
CDR2-206ENST00000567406 NPM1P06748 294 aaKnown RBP eCLIP26.44■■□□□ 1.82
CDR2-206ENST00000567406 KIF13AQ9H1H9 1805 aa26.44■■□□□ 1.82
CDR2-206ENST00000567406 ADCY10Q96PN6 1610 aa26.42■■□□□ 1.82
CDR2-206ENST00000567406 FAM69CQ0P6D2 419 aa26.4■■□□□ 1.82
CDR2-206ENST00000567406 PTPRGP23470 1445 aa26.33■■□□□ 1.81
CDR2-206ENST00000567406 ABCC10Q5T3U5 1492 aa26.32■■□□□ 1.8
CDR2-206ENST00000567406 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
CDR2-206ENST00000567406 MAPKBP1O60336 1514 aa26.29■■□□□ 1.8
CDR2-206ENST00000567406 IQGAP2Q13576 1575 aa26.28■■□□□ 1.8
CDR2-206ENST00000567406 CARMIL2Q6F5E8 1435 aa26.26■■□□□ 1.79
CDR2-206ENST00000567406 TNIKQ9UKE5 1360 aa26.26■■□□□ 1.79
CDR2-206ENST00000567406 DIP2BQ9P265 1576 aa26.25■■□□□ 1.79
CDR2-206ENST00000567406 RAPGEF2Q9Y4G8 1499 aa26.24■■□□□ 1.79
CDR2-206ENST00000567406 DISP1Q96F81 1524 aa26.19■■□□□ 1.78
CDR2-206ENST00000567406 TSPOAP1O95153 1857 aa26.16■■□□□ 1.78
CDR2-206ENST00000567406 ABCC2Q92887 1545 aa26.14■■□□□ 1.77
CDR2-206ENST00000567406 UACAQ9BZF9 1416 aa26.11■■□□□ 1.77
CDR2-206ENST00000567406 UGGT2Q9NYU1 1516 aa26.1■■□□□ 1.77
CDR2-206ENST00000567406 ASXL2Q76L83 1435 aa26.09■■□□□ 1.77
CDR2-206ENST00000567406 UHRF1BP1LA0JNW5 1464 aa26.06■■□□□ 1.76
CDR2-206ENST00000567406 KIAA0556O60303 1618 aa26.05■■□□□ 1.76
CDR2-206ENST00000567406 KDM6BO15054 1643 aa26.02■■□□□ 1.76
CDR2-206ENST00000567406 PLB1Q6P1J6 1458 aa26.01■■□□□ 1.75
CDR2-206ENST00000567406 CTTNBP2Q8WZ74 1663 aa25.99■■□□□ 1.75
CDR2-206ENST00000567406 PRXQ9BXM0 1461 aa25.98■■□□□ 1.75
CDR2-206ENST00000567406 KDM5BQ9UGL1 1544 aa25.97■■□□□ 1.75
CDR2-206ENST00000567406 ZCCHC11Q5TAX3 1644 aaKnown RBP25.95■■□□□ 1.74
CDR2-206ENST00000567406 GLI2P10070 1586 aa25.93■■□□□ 1.74
CDR2-206ENST00000567406 PPRC1Q5VV67 1664 aaKnown RBP25.93■■□□□ 1.74
CDR2-206ENST00000567406 EPRSP07814 1512 aaKnown RBP25.92■■□□□ 1.74
CDR2-206ENST00000567406 P3H3Q8IVL6 736 aa25.89■■□□□ 1.74
CDR2-206ENST00000567406 GOLGA3Q08378 1498 aa25.87■■□□□ 1.73
CDR2-206ENST00000567406 KDM4FA0A1W2PPD8 638 aa25.86■■□□□ 1.73
CDR2-206ENST00000567406 CSRNP3Q8WYN3 585 aa25.85■■□□□ 1.73
CDR2-206ENST00000567406 ARID3CA6NKF2 412 aa25.83■■□□□ 1.73
CDR2-206ENST00000567406 KCNH8Q96L42 1107 aa25.82■■□□□ 1.72
CDR2-206ENST00000567406 ABCA8O94911 1581 aa25.82■■□□□ 1.72
CDR2-206ENST00000567406 MAP3K4Q9Y6R4 1608 aa25.81■■□□□ 1.72
CDR2-206ENST00000567406 COL17A1Q9UMD9 1497 aaPredicted RBP25.81■■□□□ 1.72
CDR2-206ENST00000567406 WDR7Q9Y4E6 1490 aa25.8■■□□□ 1.72
CDR2-206ENST00000567406 FAM9AQ8IZU1 332 aaPredicted RBP25.78■■□□□ 1.72
CDR2-206ENST00000567406 RANGAP1P46060 587 aaPredicted RBP25.77■■□□□ 1.72
CDR2-206ENST00000567406 TEX14Q8IWB6 1497 aa25.72■■□□□ 1.71
CDR2-206ENST00000567406 CD109Q6YHK3 1445 aa25.69■■□□□ 1.7
CDR2-206ENST00000567406 ATP10BO94823 1461 aa25.65■■□□□ 1.7
CDR2-206ENST00000567406 SAMD9Q5K651 1589 aa25.63■■□□□ 1.69
CDR2-206ENST00000567406 EEA1Q15075 1411 aa25.62■■□□□ 1.69
CDR2-206ENST00000567406 EHMT2Q96KQ7 1210 aa25.61■■□□□ 1.69
CDR2-206ENST00000567406 CFAP43Q8NDM7 1665 aa25.6■■□□□ 1.69
CDR2-206ENST00000567406 MAGI3Q5TCQ9 1506 aa25.59■■□□□ 1.69
CDR2-206ENST00000567406 ADGRL1O94910 1474 aa25.59■■□□□ 1.69
CDR2-206ENST00000567406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.58■■□□□ 1.69
CDR2-206ENST00000567406 HNRNPUL2Q1KMD3 747 aaKnown RBP25.58■■□□□ 1.69
CDR2-206ENST00000567406 FHOD3Q2V2M9 1422 aa25.56■■□□□ 1.68
CDR2-206ENST00000567406 RAPGEF6Q8TEU7 1601 aa25.55■■□□□ 1.68
CDR2-206ENST00000567406 NUP153P49790 1475 aaKnown RBP25.47■■□□□ 1.67
CDR2-206ENST00000567406 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
CDR2-206ENST00000567406 KIF21BO75037 1637 aa25.45■■□□□ 1.66
CDR2-206ENST00000567406 ABCA9Q8IUA7 1624 aa25.43■■□□□ 1.66
CDR2-206ENST00000567406 RAPGEF3O95398 923 aa25.4■■□□□ 1.66
CDR2-206ENST00000567406 UBTFP17480 764 aaKnown RBP25.4■■□□□ 1.66
CDR2-206ENST00000567406 ARAP3Q8WWN8 1544 aa25.39■■□□□ 1.66
CDR2-206ENST00000567406 PLEKHD1A6NEE1 506 aa25.37■■□□□ 1.65
CDR2-206ENST00000567406 EFCAB5A4FU69 1503 aa25.34■■□□□ 1.65
CDR2-206ENST00000567406 ATP1B4Q9UN42 357 aaPredicted RBP25.31■■□□□ 1.64
CDR2-206ENST00000567406 PHLDB1Q86UU1 1377 aa25.3■■□□□ 1.64
CDR2-206ENST00000567406 NEO1Q92859 1461 aa25.28■■□□□ 1.64
CDR2-206ENST00000567406 CDK13Q14004 1512 aaKnown RBP25.28■■□□□ 1.64
CDR2-206ENST00000567406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.24■■□□□ 1.63
CDR2-206ENST00000567406 FRMPD1Q5SYB0 1578 aa25.23■■□□□ 1.63
CDR2-206ENST00000567406 ARHGAP35Q9NRY4 1499 aa25.22■■□□□ 1.63
CDR2-206ENST00000567406 HECW2Q9P2P5 1572 aa25.22■■□□□ 1.63
CDR2-206ENST00000567406 TTC37Q6PGP7 1564 aa25.21■■□□□ 1.63
CDR2-206ENST00000567406 AKNAQ7Z591 1439 aa25.2■■□□□ 1.62
CDR2-206ENST00000567406 FANCAO15360 1455 aa25.18■■□□□ 1.62
CDR2-206ENST00000567406 ARID4BQ4LE39 1312 aaPredicted RBP25.17■■□□□ 1.62
CDR2-206ENST00000567406 DENND4BO75064 1496 aaPredicted RBP25.16■■□□□ 1.62
CDR2-206ENST00000567406 FMN1Q68DA7 1419 aa25.15■■□□□ 1.62
CDR2-206ENST00000567406 RICTORQ6R327 1708 aa25.12■■□□□ 1.61
CDR2-206ENST00000567406 HECW1Q76N89 1606 aa25.11■■□□□ 1.61
CDR2-206ENST00000567406 ADAMTSL3P82987 1691 aa25.1■■□□□ 1.61
CDR2-206ENST00000567406 CFAP74Q9C0B2 1584 aa25.08■■□□□ 1.61
CDR2-206ENST00000567406 PTPRMP28827 1452 aa25.08■■□□□ 1.6
CDR2-206ENST00000567406 PLCH2O75038 1416 aa25.06■■□□□ 1.6
CDR2-206ENST00000567406 BCORL1Q5H9F3 1711 aa25.06■■□□□ 1.6
CDR2-206ENST00000567406 ARHGEF40Q8TER5 1519 aa25.05■■□□□ 1.6
CDR2-206ENST00000567406 SCAPERQ9BY12 1400 aa25.04■■□□□ 1.6
CDR2-206ENST00000567406 YEATS2Q9ULM3 1422 aa25.04■■□□□ 1.6
CDR2-206ENST00000567406 ILDR1Q86SU0 546 aaPredicted RBP25.04■■□□□ 1.6
CDR2-206ENST00000567406 CDK11AQ9UQ88 783 aaPredicted RBP25.04■■□□□ 1.6
CDR2-206ENST00000567406 KIF14Q15058 1648 aa25.04■■□□□ 1.6
CDR2-206ENST00000567406 LRRIQ1Q96JM4 1722 aa25.03■■□□□ 1.6
CDR2-206ENST00000567406 MADDQ8WXG6 1647 aa25.02■■□□□ 1.6
CDR2-206ENST00000567406 PLPPR3Q6T4P5 718 aa25.01■■□□□ 1.59
CDR2-206ENST00000567406 TROQ12816 1431 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms