RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 JPH4Q96JJ6 628 aa26.23■■□□□ 1.79
COMMD4-217ENST00000567195 KIAA0586Q9BVV6 1533 aa26.22■■□□□ 1.79
COMMD4-217ENST00000567195 SHROOM2Q13796 1616 aa26.21■■□□□ 1.79
COMMD4-217ENST00000567195 EEA1Q15075 1411 aa26.19■■□□□ 1.78
COMMD4-217ENST00000567195 CSRNP3Q8WYN3 585 aa26.17■■□□□ 1.78
COMMD4-217ENST00000567195 PRG4Q92954 1404 aaPredicted RBP26.15■■□□□ 1.78
COMMD4-217ENST00000567195 ERCC6L2Q5T890 1561 aa26.12■■□□□ 1.77
COMMD4-217ENST00000567195 PRXQ9BXM0 1461 aa26.12■■□□□ 1.77
COMMD4-217ENST00000567195 FAM9AQ8IZU1 332 aaPredicted RBP26.09■■□□□ 1.77
COMMD4-217ENST00000567195 IQGAP2Q13576 1575 aa26.06■■□□□ 1.76
COMMD4-217ENST00000567195 CARMIL2Q6F5E8 1435 aa25.98■■□□□ 1.75
COMMD4-217ENST00000567195 CTTNBP2Q8WZ74 1663 aa25.96■■□□□ 1.75
COMMD4-217ENST00000567195 TRHP20396 242 aaPredicted RBP25.91■■□□□ 1.74
COMMD4-217ENST00000567195 UGGT2Q9NYU1 1516 aa25.91■■□□□ 1.74
COMMD4-217ENST00000567195 TNIKQ9UKE5 1360 aa25.87■■□□□ 1.73
COMMD4-217ENST00000567195 KIF21BO75037 1637 aa25.87■■□□□ 1.73
COMMD4-217ENST00000567195 PTPRGP23470 1445 aa25.86■■□□□ 1.73
COMMD4-217ENST00000567195 DISP1Q96F81 1524 aa25.85■■□□□ 1.73
COMMD4-217ENST00000567195 TTBK1Q5TCY1 1321 aaPredicted RBP25.85■■□□□ 1.73
COMMD4-217ENST00000567195 GOLGA3Q08378 1498 aa25.81■■□□□ 1.72
COMMD4-217ENST00000567195 NPM1P06748 294 aaKnown RBP eCLIP25.8■■□□□ 1.72
COMMD4-217ENST00000567195 KIAA0556O60303 1618 aa25.79■■□□□ 1.72
COMMD4-217ENST00000567195 EHMT2Q96KQ7 1210 aa25.76■■□□□ 1.71
COMMD4-217ENST00000567195 UBTFP17480 764 aaKnown RBP25.74■■□□□ 1.71
COMMD4-217ENST00000567195 ADCY10Q96PN6 1610 aa25.7■■□□□ 1.71
COMMD4-217ENST00000567195 RANGAP1P46060 587 aaPredicted RBP25.68■■□□□ 1.7
COMMD4-217ENST00000567195 UACAQ9BZF9 1416 aa25.67■■□□□ 1.7
COMMD4-217ENST00000567195 P3H3Q8IVL6 736 aa25.66■■□□□ 1.7
COMMD4-217ENST00000567195 UHRF1BP1LA0JNW5 1464 aa25.63■■□□□ 1.69
COMMD4-217ENST00000567195 SAMD9Q5K651 1589 aa25.61■■□□□ 1.69
COMMD4-217ENST00000567195 ABCC2Q92887 1545 aa25.6■■□□□ 1.69
COMMD4-217ENST00000567195 MAPKBP1O60336 1514 aa25.57■■□□□ 1.68
COMMD4-217ENST00000567195 PLB1Q6P1J6 1458 aa25.55■■□□□ 1.68
COMMD4-217ENST00000567195 EFCAB5A4FU69 1503 aa25.54■■□□□ 1.68
COMMD4-217ENST00000567195 ABCA8O94911 1581 aa25.51■■□□□ 1.67
COMMD4-217ENST00000567195 FHOD3Q2V2M9 1422 aa25.5■■□□□ 1.67
COMMD4-217ENST00000567195 KDM5BQ9UGL1 1544 aa25.5■■□□□ 1.67
COMMD4-217ENST00000567195 KIF13AQ9H1H9 1805 aa25.47■■□□□ 1.67
COMMD4-217ENST00000567195 ABCC10Q5T3U5 1492 aa25.47■■□□□ 1.67
COMMD4-217ENST00000567195 FAM69CQ0P6D2 419 aa25.45■■□□□ 1.66
COMMD4-217ENST00000567195 ASXL2Q76L83 1435 aa25.44■■□□□ 1.66
COMMD4-217ENST00000567195 ZCCHC11Q5TAX3 1644 aaKnown RBP25.44■■□□□ 1.66
COMMD4-217ENST00000567195 RAPGEF6Q8TEU7 1601 aa25.4■■□□□ 1.66
COMMD4-217ENST00000567195 ARHGAP35Q9NRY4 1499 aa25.4■■□□□ 1.66
COMMD4-217ENST00000567195 DIP2BQ9P265 1576 aa25.39■■□□□ 1.65
COMMD4-217ENST00000567195 ARID3CA6NKF2 412 aa25.36■■□□□ 1.65
COMMD4-217ENST00000567195 FMN1Q68DA7 1419 aa25.34■■□□□ 1.65
COMMD4-217ENST00000567195 ATP10BO94823 1461 aa25.33■■□□□ 1.65
COMMD4-217ENST00000567195 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.32■■□□□ 1.64
COMMD4-217ENST00000567195 HNRNPUL2Q1KMD3 747 aaKnown RBP25.32■■□□□ 1.64
COMMD4-217ENST00000567195 WDR7Q9Y4E6 1490 aa25.31■■□□□ 1.64
COMMD4-217ENST00000567195 NUP153P49790 1475 aaKnown RBP25.29■■□□□ 1.64
COMMD4-217ENST00000567195 CLIP1P30622 1438 aa25.29■■□□□ 1.64
COMMD4-217ENST00000567195 EPRSP07814 1512 aaKnown RBP25.27■■□□□ 1.64
COMMD4-217ENST00000567195 GLI2P10070 1586 aa25.27■■□□□ 1.64
COMMD4-217ENST00000567195 ATP1B4Q9UN42 357 aaPredicted RBP25.26■■□□□ 1.63
COMMD4-217ENST00000567195 TSPOAP1O95153 1857 aa25.26■■□□□ 1.63
COMMD4-217ENST00000567195 KCNH8Q96L42 1107 aa25.25■■□□□ 1.63
COMMD4-217ENST00000567195 LOC105371045A0A1W2PR82 267 aa25.24■■□□□ 1.63
COMMD4-217ENST00000567195 HECW1Q76N89 1606 aa25.19■■□□□ 1.62
COMMD4-217ENST00000567195 PLEKHD1A6NEE1 506 aa25.18■■□□□ 1.62
COMMD4-217ENST00000567195 CEP162Q5TB80 1403 aa25.16■■□□□ 1.62
COMMD4-217ENST00000567195 MAP3K4Q9Y6R4 1608 aa25.14■■□□□ 1.61
COMMD4-217ENST00000567195 TEX14Q8IWB6 1497 aa25.12■■□□□ 1.61
COMMD4-217ENST00000567195 CDK13Q14004 1512 aaKnown RBP25.12■■□□□ 1.61
COMMD4-217ENST00000567195 CASKIN1Q8WXD9 1431 aa25.12■■□□□ 1.61
COMMD4-217ENST00000567195 CD109Q6YHK3 1445 aa25.11■■□□□ 1.61
COMMD4-217ENST00000567195 CDK11AQ9UQ88 783 aaPredicted RBP25.1■■□□□ 1.61
COMMD4-217ENST00000567195 KDM6BO15054 1643 aa25.09■■□□□ 1.61
COMMD4-217ENST00000567195 CFAP43Q8NDM7 1665 aa25.09■■□□□ 1.61
COMMD4-217ENST00000567195 PCF11O94913 1555 aaKnown RBP25.08■■□□□ 1.61
COMMD4-217ENST00000567195 PPRC1Q5VV67 1664 aaKnown RBP25.07■■□□□ 1.6
COMMD4-217ENST00000567195 FYCO1Q9BQS8 1478 aa25.05■■□□□ 1.6
COMMD4-217ENST00000567195 CCDC18Q5T9S5 1454 aa25.03■■□□□ 1.6
COMMD4-217ENST00000567195 ABCA9Q8IUA7 1624 aa25.03■■□□□ 1.6
COMMD4-217ENST00000567195 MAGI3Q5TCQ9 1506 aa25.02■■□□□ 1.6
COMMD4-217ENST00000567195 LRRIQ1Q96JM4 1722 aa24.99■■□□□ 1.59
COMMD4-217ENST00000567195 TROQ12816 1431 aaPredicted RBP24.95■■□□□ 1.58
COMMD4-217ENST00000567195 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.93■■□□□ 1.58
COMMD4-217ENST00000567195 PHLDB1Q86UU1 1377 aa24.9■■□□□ 1.58
COMMD4-217ENST00000567195 KIF14Q15058 1648 aa24.89■■□□□ 1.57
COMMD4-217ENST00000567195 TTC37Q6PGP7 1564 aa24.87■■□□□ 1.57
COMMD4-217ENST00000567195 VPS8Q8N3P4 1428 aa24.86■■□□□ 1.57
COMMD4-217ENST00000567195 NEO1Q92859 1461 aa24.85■■□□□ 1.57
COMMD4-217ENST00000567195 COL17A1Q9UMD9 1497 aaPredicted RBP24.85■■□□□ 1.57
COMMD4-217ENST00000567195 PLCH2O75038 1416 aa24.82■■□□□ 1.56
COMMD4-217ENST00000567195 AEBP2Q6ZN18 517 aaPredicted RBP24.81■■□□□ 1.56
COMMD4-217ENST00000567195 ARAP3Q8WWN8 1544 aa24.81■■□□□ 1.56
COMMD4-217ENST00000567195 FANCAO15360 1455 aa24.8■■□□□ 1.56
COMMD4-217ENST00000567195 CFAP74Q9C0B2 1584 aa24.8■■□□□ 1.56
COMMD4-217ENST00000567195 MTUS2Q5JR59 1369 aa24.8■■□□□ 1.56
COMMD4-217ENST00000567195 MYO5CQ9NQX4 1742 aa24.78■■□□□ 1.56
COMMD4-217ENST00000567195 AKNAQ7Z591 1439 aa24.77■■□□□ 1.56
COMMD4-217ENST00000567195 EFCAB2Q5VUJ9 269 aa24.76■■□□□ 1.55
COMMD4-217ENST00000567195 ARHGAP5Q13017 1502 aa24.71■■□□□ 1.55
COMMD4-217ENST00000567195 EHBP1L1Q8N3D4 1523 aa24.71■■□□□ 1.55
COMMD4-217ENST00000567195 RAPGEF3O95398 923 aa24.7■■□□□ 1.54
COMMD4-217ENST00000567195 TIAM1Q13009 1591 aa24.69■■□□□ 1.54
COMMD4-217ENST00000567195 DENND4BO75064 1496 aaPredicted RBP24.69■■□□□ 1.54
COMMD4-217ENST00000567195 APLP2Q06481 763 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms