RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 ZNF326Q5BKZ1 582 aaKnown RBP8.6□□□□□ -1.03
CDH13-209ENST00000567109 CC2D2AQ9P2K1 1620 aa8.6□□□□□ -1.03
CDH13-209ENST00000567109 P3H3Q8IVL6 736 aa8.6□□□□□ -1.03
CDH13-209ENST00000567109 PLEKHD1A6NEE1 506 aa8.59□□□□□ -1.03
CDH13-209ENST00000567109 RAPGEF2Q9Y4G8 1499 aa8.58□□□□□ -1.04
CDH13-209ENST00000567109 OSCARQ8IYS5 282 aa8.57□□□□□ -1.04
CDH13-209ENST00000567109 ACIN1Q9UKV3 1341 aaKnown RBP8.57□□□□□ -1.04
CDH13-209ENST00000567109 CDK11BP21127 795 aaKnown RBP8.57□□□□□ -1.04
CDH13-209ENST00000567109 IGF1RP08069 1367 aa8.56□□□□□ -1.04
CDH13-209ENST00000567109 FGD5Q6ZNL6 1462 aa8.55□□□□□ -1.04
CDH13-209ENST00000567109 FHAD1B1AJZ9 1412 aa8.54□□□□□ -1.04
CDH13-209ENST00000567109 DIEXFQ68CQ4 756 aaKnown RBP8.54□□□□□ -1.04
CDH13-209ENST00000567109 NEUROD1Q13562 356 aa8.53□□□□□ -1.04
CDH13-209ENST00000567109 GRIN2BQ13224 1484 aa8.53□□□□□ -1.04
CDH13-209ENST00000567109 WIZO95785 1651 aa8.51□□□□□ -1.05
CDH13-209ENST00000567109 CEP162Q5TB80 1403 aa8.51□□□□□ -1.05
CDH13-209ENST00000567109 MTUS2Q5JR59 1369 aa8.51□□□□□ -1.05
CDH13-209ENST00000567109 NESP48681 1621 aa8.5□□□□□ -1.05
CDH13-209ENST00000567109 LAMC3Q9Y6N6 1575 aa8.5□□□□□ -1.05
CDH13-209ENST00000567109 HSP90AA1P07900 732 aaKnown RBP8.5□□□□□ -1.05
CDH13-209ENST00000567109 GAPVD1Q14C86 1478 aa8.49□□□□□ -1.05
CDH13-209ENST00000567109 TOPBP1Q92547 1522 aa8.49□□□□□ -1.05
CDH13-209ENST00000567109 ANP32BQ92688 251 aaKnown RBP8.49□□□□□ -1.05
CDH13-209ENST00000567109 NPM2Q86SE8 214 aaKnown RBP8.49□□□□□ -1.05
CDH13-209ENST00000567109 FMN1Q68DA7 1419 aa8.48□□□□□ -1.05
CDH13-209ENST00000567109 JPH4Q96JJ6 628 aa8.48□□□□□ -1.05
CDH13-209ENST00000567109 ARID3CA6NKF2 412 aa8.48□□□□□ -1.05
CDH13-209ENST00000567109 RAD54L2Q9Y4B4 1467 aa8.47□□□□□ -1.05
CDH13-209ENST00000567109 CHGAP10645 457 aaKnown RBP8.47□□□□□ -1.05
CDH13-209ENST00000567109 TSPY4P0CV99 314 aa8.46□□□□□ -1.06
CDH13-209ENST00000567109 TSPY10P0CW01 314 aa8.46□□□□□ -1.06
CDH13-209ENST00000567109 AQRO60306 1485 aaKnown RBP eCLIP8.46□□□□□ -1.06
CDH13-209ENST00000567109 PTPRGP23470 1445 aa8.46□□□□□ -1.06
CDH13-209ENST00000567109 ABCA10Q8WWZ4 1543 aa8.46□□□□□ -1.06
CDH13-209ENST00000567109 POLA1P09884 1462 aaPredicted RBP8.46□□□□□ -1.06
CDH13-209ENST00000567109 ZNF777Q9ULD5 760 aaPredicted RBP8.46□□□□□ -1.06
CDH13-209ENST00000567109 ANP32CO43423 234 aa8.45□□□□□ -1.06
CDH13-209ENST00000567109 TULP1O00294 542 aaPredicted RBP8.44□□□□□ -1.06
CDH13-209ENST00000567109 PLEKHG5O94827 1062 aa8.43□□□□□ -1.06
CDH13-209ENST00000567109 GLIPR1L2Q4G1C9 344 aa8.43□□□□□ -1.06
CDH13-209ENST00000567109 HAP1P54257 671 aaPredicted RBP8.42□□□□□ -1.06
CDH13-209ENST00000567109 DNMBPQ6XZF7 1577 aa8.42□□□□□ -1.06
CDH13-209ENST00000567109 VPS8Q8N3P4 1428 aa8.42□□□□□ -1.06
CDH13-209ENST00000567109 ZBTB7CA1YPR0 619 aa8.41□□□□□ -1.06
CDH13-209ENST00000567109 CCNB3Q8WWL7 1395 aa8.41□□□□□ -1.06
CDH13-209ENST00000567109 C14orf37Q86TY3 774 aa8.41□□□□□ -1.06
CDH13-209ENST00000567109 CFDP1Q9UEE9 299 aaPredicted RBP8.41□□□□□ -1.06
CDH13-209ENST00000567109 EFCAB2Q5VUJ9 269 aa8.39□□□□□ -1.07
CDH13-209ENST00000567109 NPHP1O15259 732 aa8.39□□□□□ -1.07
CDH13-209ENST00000567109 KCNH8Q96L42 1107 aa8.39□□□□□ -1.07
CDH13-209ENST00000567109 PRXQ9BXM0 1461 aa8.39□□□□□ -1.07
CDH13-209ENST00000567109 KAT6BQ8WYB5 2073 aa8.38□□□□□ -1.07
CDH13-209ENST00000567109 KIAA0586Q9BVV6 1533 aa8.38□□□□□ -1.07
CDH13-209ENST00000567109 GTF3C3Q9Y5Q9 886 aa8.38□□□□□ -1.07
CDH13-209ENST00000567109 UPF2Q9HAU5 1272 aaKnown RBP8.37□□□□□ -1.07
CDH13-209ENST00000567109 URB2Q14146 1524 aaKnown RBP8.37□□□□□ -1.07
CDH13-209ENST00000567109 NCBP3Q53F19 620 aaKnown RBP8.37□□□□□ -1.07
CDH13-209ENST00000567109 CUX1P39880 1505 aa8.37□□□□□ -1.07
CDH13-209ENST00000567109 RSPH4AQ5TD94 716 aa8.36□□□□□ -1.07
CDH13-209ENST00000567109 MAGI1Q96QZ7 1491 aaPredicted RBP8.36□□□□□ -1.07
CDH13-209ENST00000567109 ARXQ96QS3 562 aa8.36□□□□□ -1.07
CDH13-209ENST00000567109 ANP32AP39687 249 aaKnown RBP8.35□□□□□ -1.07
CDH13-209ENST00000567109 SYNJ2O15056 1496 aa8.34□□□□□ -1.07
CDH13-209ENST00000567109 SNAPC4Q5SXM2 1469 aa8.34□□□□□ -1.07
CDH13-209ENST00000567109 PRG4Q92954 1404 aaPredicted RBP8.34□□□□□ -1.07
CDH13-209ENST00000567109 FHOD3Q2V2M9 1422 aa8.33□□□□□ -1.08
CDH13-209ENST00000567109 ERICH3Q5RHP9 1530 aa8.32□□□□□ -1.08
CDH13-209ENST00000567109 TOP2BQ02880 1626 aa8.31□□□□□ -1.08
CDH13-209ENST00000567109 ARID4BQ4LE39 1312 aaPredicted RBP8.3□□□□□ -1.08
CDH13-209ENST00000567109 MYH16Q9H6N6 1097 aa8.3□□□□□ -1.08
CDH13-209ENST00000567109 RUSC2Q8N2Y8 1516 aa8.28□□□□□ -1.08
CDH13-209ENST00000567109 TRHP20396 242 aaPredicted RBP8.28□□□□□ -1.08
CDH13-209ENST00000567109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.28□□□□□ -1.08
CDH13-209ENST00000567109 GRIN2AQ12879 1464 aa8.27□□□□□ -1.08
CDH13-209ENST00000567109 CCDC18Q5T9S5 1454 aa8.27□□□□□ -1.09
CDH13-209ENST00000567109 SENP3Q9H4L4 574 aaPredicted RBP8.27□□□□□ -1.09
CDH13-209ENST00000567109 CYB5RLQ6IPT4 315 aa8.27□□□□□ -1.09
CDH13-209ENST00000567109 UACAQ9BZF9 1416 aa8.26□□□□□ -1.09
CDH13-209ENST00000567109 PPP1R15AO75807 674 aaPredicted RBP8.26□□□□□ -1.09
CDH13-209ENST00000567109 ANP32EQ9BTT0 268 aa8.26□□□□□ -1.09
CDH13-209ENST00000567109 SYNJ1O43426 1573 aa8.26□□□□□ -1.09
CDH13-209ENST00000567109 CASKIN1Q8WXD9 1431 aa8.26□□□□□ -1.09
CDH13-209ENST00000567109 WDR62O43379 1518 aa8.25□□□□□ -1.09
CDH13-209ENST00000567109 CHIC2Q9UKJ5 165 aa8.25□□□□□ -1.09
CDH13-209ENST00000567109 EFCAB5A4FU69 1503 aa8.24□□□□□ -1.09
CDH13-209ENST00000567109 ZNF608Q9ULD9 1512 aaPredicted RBP8.24□□□□□ -1.09
CDH13-209ENST00000567109 ARHGAP35Q9NRY4 1499 aa8.24□□□□□ -1.09
CDH13-209ENST00000567109 ANKRD30AQ9BXX3 1397 aa8.23□□□□□ -1.09
CDH13-209ENST00000567109 CLSTN1O94985 981 aa8.23□□□□□ -1.09
CDH13-209ENST00000567109 ERICH6BQ5W0A0 696 aa8.23□□□□□ -1.09
CDH13-209ENST00000567109 KANK1Q14678 1352 aa8.23□□□□□ -1.09
CDH13-209ENST00000567109 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.23□□□□□ -1.09
CDH13-209ENST00000567109 ZRSR1Q15695 479 aaKnown RBP8.23□□□□□ -1.09
CDH13-209ENST00000567109 WDR43Q15061 677 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDH13-209ENST00000567109 SALL2Q9Y467 1007 aaPredicted RBP8.22□□□□□ -1.09
CDH13-209ENST00000567109 EIF5BO60841 1220 aaKnown RBP8.22□□□□□ -1.09
CDH13-209ENST00000567109 GOLGA2Q08379 1002 aa8.22□□□□□ -1.09
CDH13-209ENST00000567109 NUP160Q12769 1436 aa8.21□□□□□ -1.09
CDH13-209ENST00000567109 KANK4Q5T7N3 995 aaPredicted RBP8.2□□□□□ -1.1
CDH13-209ENST00000567109 TIMELESSQ9UNS1 1208 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms