RNA–Protein interactions for RNA: ENST00000566863.1

RPAP1-209, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 4

Gene RPAP1, Length 545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-209ENST00000566863 CEP170Q5SW79 1584 aa24■■□□□ 1.43
RPAP1-209ENST00000566863 NUP160Q12769 1436 aa23.99■■□□□ 1.43
RPAP1-209ENST00000566863 IQGAP2Q13576 1575 aa23.93■■□□□ 1.42
RPAP1-209ENST00000566863 KIAA0586Q9BVV6 1533 aa23.92■■□□□ 1.42
RPAP1-209ENST00000566863 CEP162Q5TB80 1403 aa23.86■■□□□ 1.41
RPAP1-209ENST00000566863 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
RPAP1-209ENST00000566863 CLIP1P30622 1438 aa23.8■■□□□ 1.4
RPAP1-209ENST00000566863 UGGT2Q9NYU1 1516 aa23.79■■□□□ 1.4
RPAP1-209ENST00000566863 RANGAP1P46060 587 aaPredicted RBP23.79■■□□□ 1.4
RPAP1-209ENST00000566863 EFCAB5A4FU69 1503 aa23.79■■□□□ 1.4
RPAP1-209ENST00000566863 OSCARQ8IYS5 282 aa23.77■■□□□ 1.4
RPAP1-209ENST00000566863 SHROOM2Q13796 1616 aa23.76■■□□□ 1.39
RPAP1-209ENST00000566863 SAMD9Q5K651 1589 aa23.75■■□□□ 1.39
RPAP1-209ENST00000566863 ARHGAP35Q9NRY4 1499 aa23.72■■□□□ 1.39
RPAP1-209ENST00000566863 JPH4Q96JJ6 628 aa23.7■■□□□ 1.38
RPAP1-209ENST00000566863 KIAA0556O60303 1618 aa23.7■■□□□ 1.38
RPAP1-209ENST00000566863 DISP1Q96F81 1524 aa23.67■■□□□ 1.38
RPAP1-209ENST00000566863 CARMIL2Q6F5E8 1435 aa23.66■■□□□ 1.38
RPAP1-209ENST00000566863 PRG4Q92954 1404 aaPredicted RBP23.65■■□□□ 1.38
RPAP1-209ENST00000566863 ARAP1Q96P48 1450 aa23.63■■□□□ 1.37
RPAP1-209ENST00000566863 FHOD3Q2V2M9 1422 aa23.61■■□□□ 1.37
RPAP1-209ENST00000566863 P3H3Q8IVL6 736 aa23.59■■□□□ 1.37
RPAP1-209ENST00000566863 ERCC6L2Q5T890 1561 aa23.57■■□□□ 1.36
RPAP1-209ENST00000566863 FMN1Q68DA7 1419 aa23.52■■□□□ 1.36
RPAP1-209ENST00000566863 VPS8Q8N3P4 1428 aa23.52■■□□□ 1.36
RPAP1-209ENST00000566863 PCF11O94913 1555 aaKnown RBP23.47■■□□□ 1.35
RPAP1-209ENST00000566863 ARHGEF11O15085 1522 aa23.46■■□□□ 1.35
RPAP1-209ENST00000566863 TTBK1Q5TCY1 1321 aaPredicted RBP23.44■■□□□ 1.34
RPAP1-209ENST00000566863 PTPRGP23470 1445 aa23.43■■□□□ 1.34
RPAP1-209ENST00000566863 FYCO1Q9BQS8 1478 aa23.41■■□□□ 1.34
RPAP1-209ENST00000566863 RAPGEF6Q8TEU7 1601 aa23.41■■□□□ 1.34
RPAP1-209ENST00000566863 CASKIN1Q8WXD9 1431 aa23.4■■□□□ 1.34
RPAP1-209ENST00000566863 RIMBP3CA6NJZ7 1639 aa23.4■■□□□ 1.34
RPAP1-209ENST00000566863 RIMBP3BA6NNM3 1639 aa23.4■■□□□ 1.34
RPAP1-209ENST00000566863 RIMBP3Q9UFD9 1639 aa23.4■■□□□ 1.34
RPAP1-209ENST00000566863 HECW1Q76N89 1606 aa23.38■■□□□ 1.33
RPAP1-209ENST00000566863 PLB1Q6P1J6 1458 aa23.36■■□□□ 1.33
RPAP1-209ENST00000566863 ABCA8O94911 1581 aa23.36■■□□□ 1.33
RPAP1-209ENST00000566863 UACAQ9BZF9 1416 aa23.31■■□□□ 1.32
RPAP1-209ENST00000566863 ABCC2Q92887 1545 aa23.3■■□□□ 1.32
RPAP1-209ENST00000566863 ATP1B4Q9UN42 357 aaPredicted RBP23.3■■□□□ 1.32
RPAP1-209ENST00000566863 NUP153P49790 1475 aaKnown RBP23.29■■□□□ 1.32
RPAP1-209ENST00000566863 LRRIQ1Q96JM4 1722 aa23.28■■□□□ 1.32
RPAP1-209ENST00000566863 CFAP43Q8NDM7 1665 aa23.28■■□□□ 1.32
RPAP1-209ENST00000566863 CCDC18Q5T9S5 1454 aa23.27■■□□□ 1.32
RPAP1-209ENST00000566863 UHRF1BP1LA0JNW5 1464 aa23.26■■□□□ 1.31
RPAP1-209ENST00000566863 EPRSP07814 1512 aaKnown RBP23.24■■□□□ 1.31
RPAP1-209ENST00000566863 TIAM1Q13009 1591 aa23.24■■□□□ 1.31
RPAP1-209ENST00000566863 APLP2Q06481 763 aa23.24■■□□□ 1.31
RPAP1-209ENST00000566863 ADCY10Q96PN6 1610 aa23.23■■□□□ 1.31
RPAP1-209ENST00000566863 MAP3K1Q13233 1512 aa23.23■■□□□ 1.31
RPAP1-209ENST00000566863 CDK13Q14004 1512 aaKnown RBP23.2■■□□□ 1.3
RPAP1-209ENST00000566863 ARID3CA6NKF2 412 aa23.16■■□□□ 1.3
RPAP1-209ENST00000566863 ZCCHC11Q5TAX3 1644 aaKnown RBP23.15■■□□□ 1.3
RPAP1-209ENST00000566863 KDM5BQ9UGL1 1544 aa23.15■■□□□ 1.3
RPAP1-209ENST00000566863 ATP10BO94823 1461 aa23.15■■□□□ 1.3
RPAP1-209ENST00000566863 CYB5RLQ6IPT4 315 aa23.14■■□□□ 1.29
RPAP1-209ENST00000566863 DNAJC5Q9H3Z4 198 aa23.12■■□□□ 1.29
RPAP1-209ENST00000566863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.11■■□□□ 1.29
RPAP1-209ENST00000566863 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
RPAP1-209ENST00000566863 LRRC9Q6ZRR7 1453 aa23.1■■□□□ 1.29
RPAP1-209ENST00000566863 EHBP1L1Q8N3D4 1523 aa23.09■■□□□ 1.29
RPAP1-209ENST00000566863 MTUS2Q5JR59 1369 aa23.07■■□□□ 1.28
RPAP1-209ENST00000566863 CDK11AQ9UQ88 783 aaPredicted RBP23.07■■□□□ 1.28
RPAP1-209ENST00000566863 MAGI3Q5TCQ9 1506 aa23.07■■□□□ 1.28
RPAP1-209ENST00000566863 KANK4Q5T7N3 995 aaPredicted RBP23.04■■□□□ 1.28
RPAP1-209ENST00000566863 NPM1P06748 294 aaKnown RBP eCLIP23.03■■□□□ 1.28
RPAP1-209ENST00000566863 PPARGC1BQ86YN6 1023 aaKnown RBP23.03■■□□□ 1.28
RPAP1-209ENST00000566863 TROQ12816 1431 aaPredicted RBP23.01■■□□□ 1.27
RPAP1-209ENST00000566863 SUPT6HQ7KZ85 1726 aaKnown RBP23■■□□□ 1.27
RPAP1-209ENST00000566863 PLEKHD1A6NEE1 506 aa22.99■■□□□ 1.27
RPAP1-209ENST00000566863 KIF14Q15058 1648 aa22.98■■□□□ 1.27
RPAP1-209ENST00000566863 WDR7Q9Y4E6 1490 aa22.96■■□□□ 1.27
RPAP1-209ENST00000566863 MAPKBP1O60336 1514 aa22.96■■□□□ 1.27
RPAP1-209ENST00000566863 ASXL2Q76L83 1435 aa22.95■■□□□ 1.26
RPAP1-209ENST00000566863 NCOA2Q15596 1464 aa22.92■■□□□ 1.26
RPAP1-209ENST00000566863 ABCC10Q5T3U5 1492 aa22.84■■□□□ 1.25
RPAP1-209ENST00000566863 TTC37Q6PGP7 1564 aa22.84■■□□□ 1.25
RPAP1-209ENST00000566863 ITSN2Q9NZM3 1697 aa22.84■■□□□ 1.25
RPAP1-209ENST00000566863 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.83■■□□□ 1.25
RPAP1-209ENST00000566863 PHLDB1Q86UU1 1377 aa22.82■■□□□ 1.24
RPAP1-209ENST00000566863 KCNH8Q96L42 1107 aa22.82■■□□□ 1.24
RPAP1-209ENST00000566863 ABCA9Q8IUA7 1624 aa22.81■■□□□ 1.24
RPAP1-209ENST00000566863 CCNB3Q8WWL7 1395 aa22.8■■□□□ 1.24
RPAP1-209ENST00000566863 MYOM3Q5VTT5 1437 aa22.8■■□□□ 1.24
RPAP1-209ENST00000566863 MYO5CQ9NQX4 1742 aa22.79■■□□□ 1.24
RPAP1-209ENST00000566863 CDC42BPAQ5VT25 1732 aa22.79■■□□□ 1.24
RPAP1-209ENST00000566863 DIP2BQ9P265 1576 aa22.77■■□□□ 1.24
RPAP1-209ENST00000566863 PREX2Q70Z35 1606 aa22.77■■□□□ 1.24
RPAP1-209ENST00000566863 GPATCH8Q9UKJ3 1502 aaKnown RBP22.75■■□□□ 1.23
RPAP1-209ENST00000566863 GLI2P10070 1586 aa22.74■■□□□ 1.23
RPAP1-209ENST00000566863 FGD6Q6ZV73 1430 aa22.74■■□□□ 1.23
RPAP1-209ENST00000566863 RRBP1Q9P2E9 1410 aaKnown RBP22.73■■□□□ 1.23
RPAP1-209ENST00000566863 MIA2Q96PC5 1412 aa22.72■■□□□ 1.23
RPAP1-209ENST00000566863 CDC42BPBQ9Y5S2 1711 aa22.71■■□□□ 1.23
RPAP1-209ENST00000566863 PTPN23Q9H3S7 1636 aa22.69■■□□□ 1.22
RPAP1-209ENST00000566863 MAP3K4Q9Y6R4 1608 aa22.69■■□□□ 1.22
RPAP1-209ENST00000566863 ARHGAP5Q13017 1502 aa22.69■■□□□ 1.22
RPAP1-209ENST00000566863 ARAP3Q8WWN8 1544 aa22.69■■□□□ 1.22
RPAP1-209ENST00000566863 KIF13AQ9H1H9 1805 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms