RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 KIAA0586Q9BVV6 1533 aa26.08■■□□□ 1.77
RNF40-209ENST00000566703 RUSC2Q8N2Y8 1516 aa26.07■■□□□ 1.76
RNF40-209ENST00000566703 CUL7Q14999 1698 aa26.03■■□□□ 1.76
RNF40-209ENST00000566703 NPM1P06748 294 aaKnown RBP eCLIP26.01■■□□□ 1.75
RNF40-209ENST00000566703 CARMIL1Q5VZK9 1371 aa26.01■■□□□ 1.75
RNF40-209ENST00000566703 FAM69CQ0P6D2 419 aa25.86■■□□□ 1.73
RNF40-209ENST00000566703 MAPKBP1O60336 1514 aa25.85■■□□□ 1.73
RNF40-209ENST00000566703 ABCC10Q5T3U5 1492 aa25.85■■□□□ 1.73
RNF40-209ENST00000566703 PTPRGP23470 1445 aa25.84■■□□□ 1.73
RNF40-209ENST00000566703 CARMIL2Q6F5E8 1435 aa25.83■■□□□ 1.73
RNF40-209ENST00000566703 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
RNF40-209ENST00000566703 ADCY10Q96PN6 1610 aa25.81■■□□□ 1.72
RNF40-209ENST00000566703 KIF13AQ9H1H9 1805 aa25.8■■□□□ 1.72
RNF40-209ENST00000566703 TNIKQ9UKE5 1360 aa25.8■■□□□ 1.72
RNF40-209ENST00000566703 RAPGEF2Q9Y4G8 1499 aa25.74■■□□□ 1.71
RNF40-209ENST00000566703 IQGAP2Q13576 1575 aa25.73■■□□□ 1.71
RNF40-209ENST00000566703 DIP2BQ9P265 1576 aa25.69■■□□□ 1.7
RNF40-209ENST00000566703 TTBK1Q5TCY1 1321 aaPredicted RBP25.68■■□□□ 1.7
RNF40-209ENST00000566703 ABCC2Q92887 1545 aa25.66■■□□□ 1.7
RNF40-209ENST00000566703 UHRF1BP1LA0JNW5 1464 aa25.65■■□□□ 1.7
RNF40-209ENST00000566703 DISP1Q96F81 1524 aa25.64■■□□□ 1.7
RNF40-209ENST00000566703 UACAQ9BZF9 1416 aa25.63■■□□□ 1.69
RNF40-209ENST00000566703 UGGT2Q9NYU1 1516 aa25.63■■□□□ 1.69
RNF40-209ENST00000566703 PLB1Q6P1J6 1458 aa25.59■■□□□ 1.69
RNF40-209ENST00000566703 ASXL2Q76L83 1435 aa25.56■■□□□ 1.68
RNF40-209ENST00000566703 KDM5BQ9UGL1 1544 aa25.51■■□□□ 1.67
RNF40-209ENST00000566703 GLI2P10070 1586 aa25.5■■□□□ 1.67
RNF40-209ENST00000566703 PRXQ9BXM0 1461 aa25.49■■□□□ 1.67
RNF40-209ENST00000566703 KIAA0556O60303 1618 aa25.48■■□□□ 1.67
RNF40-209ENST00000566703 KDM6BO15054 1643 aa25.47■■□□□ 1.67
RNF40-209ENST00000566703 GOLGA3Q08378 1498 aa25.46■■□□□ 1.67
RNF40-209ENST00000566703 TSPOAP1O95153 1857 aa25.43■■□□□ 1.66
RNF40-209ENST00000566703 EPRSP07814 1512 aaKnown RBP25.39■■□□□ 1.66
RNF40-209ENST00000566703 CTTNBP2Q8WZ74 1663 aa25.39■■□□□ 1.65
RNF40-209ENST00000566703 CSRNP3Q8WYN3 585 aa25.37■■□□□ 1.65
RNF40-209ENST00000566703 FAM9AQ8IZU1 332 aaPredicted RBP25.36■■□□□ 1.65
RNF40-209ENST00000566703 ZCCHC11Q5TAX3 1644 aaKnown RBP25.34■■□□□ 1.65
RNF40-209ENST00000566703 WDR7Q9Y4E6 1490 aa25.31■■□□□ 1.64
RNF40-209ENST00000566703 PPRC1Q5VV67 1664 aaKnown RBP25.31■■□□□ 1.64
RNF40-209ENST00000566703 TEX14Q8IWB6 1497 aa25.3■■□□□ 1.64
RNF40-209ENST00000566703 KDM4FA0A1W2PPD8 638 aa25.3■■□□□ 1.64
RNF40-209ENST00000566703 ABCA8O94911 1581 aa25.3■■□□□ 1.64
RNF40-209ENST00000566703 MAP3K4Q9Y6R4 1608 aa25.28■■□□□ 1.64
RNF40-209ENST00000566703 EEA1Q15075 1411 aa25.25■■□□□ 1.63
RNF40-209ENST00000566703 COL17A1Q9UMD9 1497 aaPredicted RBP25.24■■□□□ 1.63
RNF40-209ENST00000566703 KCNH8Q96L42 1107 aa25.22■■□□□ 1.63
RNF40-209ENST00000566703 P3H3Q8IVL6 736 aa25.2■■□□□ 1.62
RNF40-209ENST00000566703 CD109Q6YHK3 1445 aa25.2■■□□□ 1.62
RNF40-209ENST00000566703 MAGI3Q5TCQ9 1506 aa25.17■■□□□ 1.62
RNF40-209ENST00000566703 ATP10BO94823 1461 aa25.14■■□□□ 1.61
RNF40-209ENST00000566703 CFAP43Q8NDM7 1665 aa25.1■■□□□ 1.61
RNF40-209ENST00000566703 SAMD9Q5K651 1589 aa25.09■■□□□ 1.61
RNF40-209ENST00000566703 ARID3CA6NKF2 412 aa25.06■■□□□ 1.6
RNF40-209ENST00000566703 ADGRL1O94910 1474 aa25.03■■□□□ 1.6
RNF40-209ENST00000566703 PHLDB1Q86UU1 1377 aa25.03■■□□□ 1.6
RNF40-209ENST00000566703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.99■■□□□ 1.59
RNF40-209ENST00000566703 HNRNPUL2Q1KMD3 747 aaKnown RBP24.99■■□□□ 1.59
RNF40-209ENST00000566703 RAPGEF6Q8TEU7 1601 aa24.99■■□□□ 1.59
RNF40-209ENST00000566703 ARAP3Q8WWN8 1544 aa24.97■■□□□ 1.59
RNF40-209ENST00000566703 RANGAP1P46060 587 aaPredicted RBP24.97■■□□□ 1.59
RNF40-209ENST00000566703 NUP153P49790 1475 aaKnown RBP24.94■■□□□ 1.58
RNF40-209ENST00000566703 FHOD3Q2V2M9 1422 aa24.94■■□□□ 1.58
RNF40-209ENST00000566703 ABCA9Q8IUA7 1624 aa24.94■■□□□ 1.58
RNF40-209ENST00000566703 PLEKHD1A6NEE1 506 aa24.93■■□□□ 1.58
RNF40-209ENST00000566703 KIF21BO75037 1637 aa24.93■■□□□ 1.58
RNF40-209ENST00000566703 EFCAB5A4FU69 1503 aa24.89■■□□□ 1.57
RNF40-209ENST00000566703 NEO1Q92859 1461 aa24.89■■□□□ 1.57
RNF40-209ENST00000566703 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
RNF40-209ENST00000566703 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
RNF40-209ENST00000566703 RAPGEF3O95398 923 aa24.82■■□□□ 1.56
RNF40-209ENST00000566703 FMN1Q68DA7 1419 aa24.73■■□□□ 1.55
RNF40-209ENST00000566703 AKNAQ7Z591 1439 aa24.71■■□□□ 1.55
RNF40-209ENST00000566703 DENND4BO75064 1496 aaPredicted RBP24.7■■□□□ 1.55
RNF40-209ENST00000566703 EHMT2Q96KQ7 1210 aa24.7■■□□□ 1.54
RNF40-209ENST00000566703 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.7■■□□□ 1.54
RNF40-209ENST00000566703 CDK11AQ9UQ88 783 aaPredicted RBP24.68■■□□□ 1.54
RNF40-209ENST00000566703 FANCAO15360 1455 aa24.68■■□□□ 1.54
RNF40-209ENST00000566703 ARHGAP35Q9NRY4 1499 aa24.67■■□□□ 1.54
RNF40-209ENST00000566703 FRMPD1Q5SYB0 1578 aa24.65■■□□□ 1.54
RNF40-209ENST00000566703 ATP1B4Q9UN42 357 aaPredicted RBP24.65■■□□□ 1.54
RNF40-209ENST00000566703 CDK13Q14004 1512 aaKnown RBP24.65■■□□□ 1.54
RNF40-209ENST00000566703 HECW2Q9P2P5 1572 aa24.64■■□□□ 1.54
RNF40-209ENST00000566703 CFAP74Q9C0B2 1584 aa24.63■■□□□ 1.53
RNF40-209ENST00000566703 ARID4BQ4LE39 1312 aaPredicted RBP24.62■■□□□ 1.53
RNF40-209ENST00000566703 PLCH2O75038 1416 aa24.62■■□□□ 1.53
RNF40-209ENST00000566703 ADAMTSL3P82987 1691 aa24.59■■□□□ 1.53
RNF40-209ENST00000566703 TTC37Q6PGP7 1564 aa24.59■■□□□ 1.53
RNF40-209ENST00000566703 HECW1Q76N89 1606 aa24.58■■□□□ 1.53
RNF40-209ENST00000566703 EFCAB2Q5VUJ9 269 aa24.58■■□□□ 1.53
RNF40-209ENST00000566703 PTPRMP28827 1452 aa24.58■■□□□ 1.52
RNF40-209ENST00000566703 MAGI2Q86UL8 1455 aa24.57■■□□□ 1.52
RNF40-209ENST00000566703 RICTORQ6R327 1708 aa24.55■■□□□ 1.52
RNF40-209ENST00000566703 SCAPERQ9BY12 1400 aa24.54■■□□□ 1.52
RNF40-209ENST00000566703 ZMYM4Q5VZL5 1548 aa24.54■■□□□ 1.52
RNF40-209ENST00000566703 ARHGEF40Q8TER5 1519 aa24.54■■□□□ 1.52
RNF40-209ENST00000566703 TROQ12816 1431 aaPredicted RBP24.52■■□□□ 1.52
RNF40-209ENST00000566703 BCORL1Q5H9F3 1711 aa24.52■■□□□ 1.52
RNF40-209ENST00000566703 POGZQ7Z3K3 1410 aa24.51■■□□□ 1.51
RNF40-209ENST00000566703 ILDR1Q86SU0 546 aaPredicted RBP24.49■■□□□ 1.51
RNF40-209ENST00000566703 CLIP1P30622 1438 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms