RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 RUSC2Q8N2Y8 1516 aa48.13■■■■■ 5.3
UBFD1-206ENST00000566669 CUL7Q14999 1698 aa48.11■■■■■ 5.29
UBFD1-206ENST00000566669 KIAA0586Q9BVV6 1533 aa48.02■■■■■ 5.28
UBFD1-206ENST00000566669 CARMIL1Q5VZK9 1371 aa47.88■■■■■ 5.25
UBFD1-206ENST00000566669 NPM1P06748 294 aaKnown RBP eCLIP47.8■■■■■ 5.24
UBFD1-206ENST00000566669 MAPKBP1O60336 1514 aa47.62■■■■■ 5.21
UBFD1-206ENST00000566669 CARMIL2Q6F5E8 1435 aa47.61■■■■■ 5.21
UBFD1-206ENST00000566669 ADCY10Q96PN6 1610 aa47.56■■■■■ 5.2
UBFD1-206ENST00000566669 ABCC10Q5T3U5 1492 aa47.54■■■■■ 5.2
UBFD1-206ENST00000566669 KIF13AQ9H1H9 1805 aa47.53■■■■■ 5.2
UBFD1-206ENST00000566669 PTPRGP23470 1445 aa47.53■■■■■ 5.2
UBFD1-206ENST00000566669 IQGAP2Q13576 1575 aa47.52■■■■■ 5.2
UBFD1-206ENST00000566669 TNIKQ9UKE5 1360 aa47.49■■■■■ 5.19
UBFD1-206ENST00000566669 RAPGEF2Q9Y4G8 1499 aa47.47■■■■■ 5.19
UBFD1-206ENST00000566669 FAM69CQ0P6D2 419 aa47.46■■■■■ 5.19
UBFD1-206ENST00000566669 DIP2BQ9P265 1576 aa47.34■■■■■ 5.17
UBFD1-206ENST00000566669 AEBP2Q6ZN18 517 aaPredicted RBP47.29■■■■■ 5.16
UBFD1-206ENST00000566669 ABCC2Q92887 1545 aa47.26■■■■■ 5.16
UBFD1-206ENST00000566669 UGGT2Q9NYU1 1516 aa47.25■■■■■ 5.16
UBFD1-206ENST00000566669 UHRF1BP1LA0JNW5 1464 aa47.24■■■■■ 5.15
UBFD1-206ENST00000566669 DISP1Q96F81 1524 aa47.23■■■■■ 5.15
UBFD1-206ENST00000566669 TTBK1Q5TCY1 1321 aaPredicted RBP47.2■■■■■ 5.15
UBFD1-206ENST00000566669 UACAQ9BZF9 1416 aa47.17■■■■■ 5.14
UBFD1-206ENST00000566669 PLB1Q6P1J6 1458 aa47.13■■■■■ 5.13
UBFD1-206ENST00000566669 KIAA0556O60303 1618 aa47.05■■■■■ 5.12
UBFD1-206ENST00000566669 ASXL2Q76L83 1435 aa47.04■■■■■ 5.12
UBFD1-206ENST00000566669 GOLGA3Q08378 1498 aa47■■■■■ 5.11
UBFD1-206ENST00000566669 PRXQ9BXM0 1461 aa47■■■■■ 5.11
UBFD1-206ENST00000566669 KDM5BQ9UGL1 1544 aa46.98■■■■■ 5.11
UBFD1-206ENST00000566669 CTTNBP2Q8WZ74 1663 aa46.97■■■■■ 5.11
UBFD1-206ENST00000566669 GLI2P10070 1586 aa46.95■■■■■ 5.11
UBFD1-206ENST00000566669 KDM6BO15054 1643 aa46.92■■■■■ 5.1
UBFD1-206ENST00000566669 TSPOAP1O95153 1857 aa46.85■■■■■ 5.09
UBFD1-206ENST00000566669 FAM9AQ8IZU1 332 aaPredicted RBP46.76■■■■■ 5.08
UBFD1-206ENST00000566669 ZCCHC11Q5TAX3 1644 aaKnown RBP46.76■■■■■ 5.08
UBFD1-206ENST00000566669 EPRSP07814 1512 aaKnown RBP46.75■■■■■ 5.07
UBFD1-206ENST00000566669 CSRNP3Q8WYN3 585 aa46.69■■■■■ 5.06
UBFD1-206ENST00000566669 EEA1Q15075 1411 aa46.66■■■■■ 5.06
UBFD1-206ENST00000566669 TEX14Q8IWB6 1497 aa46.64■■■■■ 5.06
UBFD1-206ENST00000566669 WDR7Q9Y4E6 1490 aa46.64■■■■■ 5.06
UBFD1-206ENST00000566669 ABCA8O94911 1581 aa46.62■■■■■ 5.05
UBFD1-206ENST00000566669 PPRC1Q5VV67 1664 aaKnown RBP46.62■■■■■ 5.05
UBFD1-206ENST00000566669 MAP3K4Q9Y6R4 1608 aa46.61■■■■■ 5.05
UBFD1-206ENST00000566669 SAMD9Q5K651 1589 aa46.35■■■■■ 5.01
UBFD1-206ENST00000566669 CD109Q6YHK3 1445 aa46.35■■■■■ 5.01
UBFD1-206ENST00000566669 MAGI3Q5TCQ9 1506 aa46.34■■■■■ 5.01
UBFD1-206ENST00000566669 CFAP43Q8NDM7 1665 aa46.33■■■■■ 5.01
UBFD1-206ENST00000566669 KDM4FA0A1W2PPD8 638 aa46.33■■■■■ 5.01
UBFD1-206ENST00000566669 P3H3Q8IVL6 736 aa46.31■■■■■ 5
UBFD1-206ENST00000566669 KCNH8Q96L42 1107 aa46.31■■■■■ 5
UBFD1-206ENST00000566669 COL17A1Q9UMD9 1497 aaPredicted RBP46.31■■■■■ 5
UBFD1-206ENST00000566669 ATP10BO94823 1461 aa46.24■■■■■ 4.99
UBFD1-206ENST00000566669 RAPGEF6Q8TEU7 1601 aa46.14■■■■■ 4.98
UBFD1-206ENST00000566669 KIF21BO75037 1637 aa46.11■■■■■ 4.97
UBFD1-206ENST00000566669 PHLDB1Q86UU1 1377 aa46.07■■■■■ 4.97
UBFD1-206ENST00000566669 ARID3CA6NKF2 412 aa46.06■■■■■ 4.96
UBFD1-206ENST00000566669 ADGRL1O94910 1474 aa46.04■■■■■ 4.96
UBFD1-206ENST00000566669 EFCAB5A4FU69 1503 aa46.03■■■■■ 4.96
UBFD1-206ENST00000566669 ABCA9Q8IUA7 1624 aa45.99■■■■■ 4.95
UBFD1-206ENST00000566669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP45.99■■■■■ 4.95
UBFD1-206ENST00000566669 HNRNPUL2Q1KMD3 747 aaKnown RBP45.99■■■■■ 4.95
UBFD1-206ENST00000566669 ARAP3Q8WWN8 1544 aa45.98■■■■■ 4.95
UBFD1-206ENST00000566669 FHOD3Q2V2M9 1422 aa45.98■■■■■ 4.95
UBFD1-206ENST00000566669 NUP153P49790 1475 aaKnown RBP45.97■■■■■ 4.95
UBFD1-206ENST00000566669 RANGAP1P46060 587 aaPredicted RBP45.95■■■■■ 4.95
UBFD1-206ENST00000566669 PLEKHD1A6NEE1 506 aa45.85■■■■■ 4.93
UBFD1-206ENST00000566669 NEO1Q92859 1461 aa45.85■■■■■ 4.93
UBFD1-206ENST00000566669 CHIC1Q5VXU3 224 aa45.82■■■■■ 4.93
UBFD1-206ENST00000566669 UBTFP17480 764 aaKnown RBP45.76■■■■■ 4.92
UBFD1-206ENST00000566669 FMN1Q68DA7 1419 aa45.66■■■■■ 4.9
UBFD1-206ENST00000566669 RAPGEF3O95398 923 aa45.57■■■■■ 4.89
UBFD1-206ENST00000566669 CFAP74Q9C0B2 1584 aa45.54■■■■■ 4.88
UBFD1-206ENST00000566669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP45.52■■■■■ 4.88
UBFD1-206ENST00000566669 FANCAO15360 1455 aa45.49■■■■■ 4.87
UBFD1-206ENST00000566669 ARHGAP35Q9NRY4 1499 aa45.49■■■■■ 4.87
UBFD1-206ENST00000566669 CDK11AQ9UQ88 783 aaPredicted RBP45.49■■■■■ 4.87
UBFD1-206ENST00000566669 AKNAQ7Z591 1439 aa45.48■■■■■ 4.87
UBFD1-206ENST00000566669 DENND4BO75064 1496 aaPredicted RBP45.48■■■■■ 4.87
UBFD1-206ENST00000566669 HECW1Q76N89 1606 aa45.48■■■■■ 4.87
UBFD1-206ENST00000566669 EHMT2Q96KQ7 1210 aa45.46■■■■■ 4.87
UBFD1-206ENST00000566669 CDK13Q14004 1512 aaKnown RBP45.45■■■■■ 4.87
UBFD1-206ENST00000566669 FRMPD1Q5SYB0 1578 aa45.42■■■■■ 4.86
UBFD1-206ENST00000566669 TTC37Q6PGP7 1564 aa45.38■■■■■ 4.86
UBFD1-206ENST00000566669 ATP1B4Q9UN42 357 aaPredicted RBP45.38■■■■■ 4.86
UBFD1-206ENST00000566669 PLCH2O75038 1416 aa45.34■■■■■ 4.85
UBFD1-206ENST00000566669 HECW2Q9P2P5 1572 aa45.33■■■■■ 4.85
UBFD1-206ENST00000566669 RICTORQ6R327 1708 aa45.3■■■■■ 4.84
UBFD1-206ENST00000566669 ARHGEF40Q8TER5 1519 aa45.29■■■■■ 4.84
UBFD1-206ENST00000566669 ADAMTSL3P82987 1691 aa45.27■■■■■ 4.84
UBFD1-206ENST00000566669 ARID4BQ4LE39 1312 aaPredicted RBP45.26■■■■■ 4.84
UBFD1-206ENST00000566669 MAGI2Q86UL8 1455 aa45.26■■■■■ 4.84
UBFD1-206ENST00000566669 ZMYM4Q5VZL5 1548 aa45.26■■■■■ 4.84
UBFD1-206ENST00000566669 CLIP1P30622 1438 aa45.23■■■■■ 4.83
UBFD1-206ENST00000566669 TROQ12816 1431 aaPredicted RBP45.21■■■■■ 4.83
UBFD1-206ENST00000566669 EFCAB2Q5VUJ9 269 aa45.21■■■■■ 4.83
UBFD1-206ENST00000566669 PTPRMP28827 1452 aa45.2■■■■■ 4.83
UBFD1-206ENST00000566669 BCORL1Q5H9F3 1711 aa45.18■■■■■ 4.82
UBFD1-206ENST00000566669 KIF14Q15058 1648 aa45.17■■■■■ 4.82
UBFD1-206ENST00000566669 POGZQ7Z3K3 1410 aa45.16■■■■■ 4.82
UBFD1-206ENST00000566669 SCAPERQ9BY12 1400 aa45.16■■■■■ 4.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms