RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 ARHGAP35Q9NRY4 1499 aa16.65■□□□□ 0.26
PDXDC1-214ENST00000566633 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
PDXDC1-214ENST00000566633 FHAD1B1AJZ9 1412 aa16.64■□□□□ 0.25
PDXDC1-214ENST00000566633 SNAPC4Q5SXM2 1469 aa16.64■□□□□ 0.25
PDXDC1-214ENST00000566633 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
PDXDC1-214ENST00000566633 PBRM1Q86U86 1689 aa16.63■□□□□ 0.25
PDXDC1-214ENST00000566633 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
PDXDC1-214ENST00000566633 APLP2Q06481 763 aa16.59■□□□□ 0.25
PDXDC1-214ENST00000566633 ADAMTS12P58397 1594 aa16.57■□□□□ 0.24
PDXDC1-214ENST00000566633 ATP1B4Q9UN42 357 aaPredicted RBP16.57■□□□□ 0.24
PDXDC1-214ENST00000566633 FHOD3Q2V2M9 1422 aa16.55■□□□□ 0.24
PDXDC1-214ENST00000566633 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
PDXDC1-214ENST00000566633 GRIN2AQ12879 1464 aa16.5■□□□□ 0.23
PDXDC1-214ENST00000566633 MAGI1Q96QZ7 1491 aaPredicted RBP16.5■□□□□ 0.23
PDXDC1-214ENST00000566633 CTTNBP2Q8WZ74 1663 aa16.49■□□□□ 0.23
PDXDC1-214ENST00000566633 SYNJ2O15056 1496 aa16.48■□□□□ 0.23
PDXDC1-214ENST00000566633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
PDXDC1-214ENST00000566633 CCER1Q8TC90 406 aaPredicted RBP16.42■□□□□ 0.22
PDXDC1-214ENST00000566633 IQGAP2Q13576 1575 aa16.42■□□□□ 0.22
PDXDC1-214ENST00000566633 KIAA0586Q9BVV6 1533 aa16.41■□□□□ 0.22
PDXDC1-214ENST00000566633 ARID3CA6NKF2 412 aa16.4■□□□□ 0.22
PDXDC1-214ENST00000566633 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
PDXDC1-214ENST00000566633 EFCAB5A4FU69 1503 aa16.4■□□□□ 0.22
PDXDC1-214ENST00000566633 JPH4Q96JJ6 628 aa16.39■□□□□ 0.21
PDXDC1-214ENST00000566633 SAMD9Q5K651 1589 aa16.36■□□□□ 0.21
PDXDC1-214ENST00000566633 PCF11O94913 1555 aaKnown RBP16.35■□□□□ 0.21
PDXDC1-214ENST00000566633 NUP160Q12769 1436 aa16.35■□□□□ 0.21
PDXDC1-214ENST00000566633 FMN1Q68DA7 1419 aa16.35■□□□□ 0.21
PDXDC1-214ENST00000566633 DISP1Q96F81 1524 aa16.32■□□□□ 0.2
PDXDC1-214ENST00000566633 CASKIN1Q8WXD9 1431 aa16.32■□□□□ 0.2
PDXDC1-214ENST00000566633 UGGT2Q9NYU1 1516 aa16.31■□□□□ 0.2
PDXDC1-214ENST00000566633 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
PDXDC1-214ENST00000566633 FYCO1Q9BQS8 1478 aa16.27■□□□□ 0.2
PDXDC1-214ENST00000566633 TIAM1Q13009 1591 aa16.27■□□□□ 0.2
PDXDC1-214ENST00000566633 CHD1O14646 1710 aa16.26■□□□□ 0.19
PDXDC1-214ENST00000566633 LRRC9Q6ZRR7 1453 aa16.25■□□□□ 0.19
PDXDC1-214ENST00000566633 KIAA0556O60303 1618 aa16.25■□□□□ 0.19
PDXDC1-214ENST00000566633 PRG4Q92954 1404 aaPredicted RBP16.23■□□□□ 0.19
PDXDC1-214ENST00000566633 ITGAEP38570 1179 aa16.22■□□□□ 0.19
PDXDC1-214ENST00000566633 CARMIL2Q6F5E8 1435 aa16.22■□□□□ 0.19
PDXDC1-214ENST00000566633 MTUS2Q5JR59 1369 aa16.2■□□□□ 0.18
PDXDC1-214ENST00000566633 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
PDXDC1-214ENST00000566633 PLB1Q6P1J6 1458 aa16.2■□□□□ 0.18
PDXDC1-214ENST00000566633 MAP3K1Q13233 1512 aa16.19■□□□□ 0.18
PDXDC1-214ENST00000566633 CDK13Q14004 1512 aaKnown RBP16.17■□□□□ 0.18
PDXDC1-214ENST00000566633 LRRIQ1Q96JM4 1722 aa16.16■□□□□ 0.18
PDXDC1-214ENST00000566633 EPRSP07814 1512 aaKnown RBP16.15■□□□□ 0.18
PDXDC1-214ENST00000566633 FAM50AQ14320 339 aaKnown RBP16.15■□□□□ 0.18
PDXDC1-214ENST00000566633 CFAP43Q8NDM7 1665 aa16.14■□□□□ 0.17
PDXDC1-214ENST00000566633 ERCC6L2Q5T890 1561 aa16.14■□□□□ 0.17
PDXDC1-214ENST00000566633 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
PDXDC1-214ENST00000566633 NUP153P49790 1475 aaKnown RBP16.13■□□□□ 0.17
PDXDC1-214ENST00000566633 PTPRGP23470 1445 aa16.13■□□□□ 0.17
PDXDC1-214ENST00000566633 MAGI3Q5TCQ9 1506 aa16.12■□□□□ 0.17
PDXDC1-214ENST00000566633 HECW1Q76N89 1606 aa16.11■□□□□ 0.17
PDXDC1-214ENST00000566633 RRBP1Q9P2E9 1410 aaKnown RBP16.11■□□□□ 0.17
PDXDC1-214ENST00000566633 RAPGEF6Q8TEU7 1601 aa16.09■□□□□ 0.17
PDXDC1-214ENST00000566633 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
PDXDC1-214ENST00000566633 CCDC18Q5T9S5 1454 aa16.08■□□□□ 0.17
PDXDC1-214ENST00000566633 NCOA2Q15596 1464 aa16.07■□□□□ 0.16
PDXDC1-214ENST00000566633 CLASP1Q7Z460 1538 aa16.06■□□□□ 0.16
PDXDC1-214ENST00000566633 CDK11AQ9UQ88 783 aaPredicted RBP16.04■□□□□ 0.16
PDXDC1-214ENST00000566633 SHROOM2Q13796 1616 aa16.03■□□□□ 0.16
PDXDC1-214ENST00000566633 EHBP1L1Q8N3D4 1523 aa16.02■□□□□ 0.15
PDXDC1-214ENST00000566633 ATP10BO94823 1461 aa16.01■□□□□ 0.15
PDXDC1-214ENST00000566633 PLEKHD1A6NEE1 506 aa16.01■□□□□ 0.15
PDXDC1-214ENST00000566633 ABCA8O94911 1581 aa16.01■□□□□ 0.15
PDXDC1-214ENST00000566633 FGD6Q6ZV73 1430 aa16■□□□□ 0.15
PDXDC1-214ENST00000566633 DIEXFQ68CQ4 756 aaKnown RBP15.99■□□□□ 0.15
PDXDC1-214ENST00000566633 UACAQ9BZF9 1416 aa15.99■□□□□ 0.15
PDXDC1-214ENST00000566633 MYOM3Q5VTT5 1437 aa15.98■□□□□ 0.15
PDXDC1-214ENST00000566633 SUPT6HQ7KZ85 1726 aaKnown RBP15.97■□□□□ 0.15
PDXDC1-214ENST00000566633 ZNF316A6NFI3 1004 aaPredicted RBP15.96■□□□□ 0.15
PDXDC1-214ENST00000566633 ZNF644Q9H582 1327 aaPredicted RBP15.96■□□□□ 0.14
PDXDC1-214ENST00000566633 TROQ12816 1431 aaPredicted RBP15.95■□□□□ 0.14
PDXDC1-214ENST00000566633 CLSPNQ9HAW4 1339 aa15.94■□□□□ 0.14
PDXDC1-214ENST00000566633 ZNF777Q9ULD5 760 aaPredicted RBP15.94■□□□□ 0.14
PDXDC1-214ENST00000566633 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
PDXDC1-214ENST00000566633 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
PDXDC1-214ENST00000566633 CHIC2Q9UKJ5 165 aa15.93■□□□□ 0.14
PDXDC1-214ENST00000566633 DHX57Q6P158 1386 aaKnown RBP15.93■□□□□ 0.14
PDXDC1-214ENST00000566633 PTPRKQ15262 1439 aa15.91■□□□□ 0.14
PDXDC1-214ENST00000566633 CFDP1Q9UEE9 299 aaPredicted RBP15.9■□□□□ 0.14
PDXDC1-214ENST00000566633 KIF14Q15058 1648 aa15.89■□□□□ 0.13
PDXDC1-214ENST00000566633 ABCC2Q92887 1545 aa15.88■□□□□ 0.13
PDXDC1-214ENST00000566633 RAB3GAP2Q9H2M9 1393 aa15.87■□□□□ 0.13
PDXDC1-214ENST00000566633 RRP7BPQ9NSQ0 103 aa15.86■□□□□ 0.13
PDXDC1-214ENST00000566633 PTPN23Q9H3S7 1636 aa15.86■□□□□ 0.13
PDXDC1-214ENST00000566633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.86■□□□□ 0.13
PDXDC1-214ENST00000566633 GPATCH8Q9UKJ3 1502 aaKnown RBP15.85■□□□□ 0.13
PDXDC1-214ENST00000566633 MIA2Q96PC5 1412 aa15.83■□□□□ 0.13
PDXDC1-214ENST00000566633 SETD5Q9C0A6 1442 aa15.83■□□□□ 0.13
PDXDC1-214ENST00000566633 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
PDXDC1-214ENST00000566633 TCOF1Q13428 1488 aaKnown RBP15.8■□□□□ 0.12
PDXDC1-214ENST00000566633 ABCC10Q5T3U5 1492 aa15.79■□□□□ 0.12
PDXDC1-214ENST00000566633 UHRF1BP1LA0JNW5 1464 aa15.79■□□□□ 0.12
PDXDC1-214ENST00000566633 KDM5BQ9UGL1 1544 aa15.78■□□□□ 0.12
PDXDC1-214ENST00000566633 HNRNPMP52272 730 aaKnown RBP eCLIP15.78■□□□□ 0.12
PDXDC1-214ENST00000566633 ADCY10Q96PN6 1610 aa15.77■□□□□ 0.12
PDXDC1-214ENST00000566633 ZCCHC11Q5TAX3 1644 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms