RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 FHAD1B1AJZ9 1412 aa19.14■□□□□ 0.65
KARS-207ENST00000566560 IGF1RP08069 1367 aa19.13■□□□□ 0.65
KARS-207ENST00000566560 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
KARS-207ENST00000566560 FBLN2P98095 1184 aa19.06■□□□□ 0.64
KARS-207ENST00000566560 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
KARS-207ENST00000566560 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
KARS-207ENST00000566560 FAM9AQ8IZU1 332 aaPredicted RBP19.05■□□□□ 0.64
KARS-207ENST00000566560 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
KARS-207ENST00000566560 PRXQ9BXM0 1461 aa19.03■□□□□ 0.64
KARS-207ENST00000566560 RAPGEF2Q9Y4G8 1499 aa19.02■□□□□ 0.63
KARS-207ENST00000566560 CSRNP3Q8WYN3 585 aa19.01■□□□□ 0.63
KARS-207ENST00000566560 CEP170Q5SW79 1584 aa19.01■□□□□ 0.63
KARS-207ENST00000566560 KIF21BO75037 1637 aa19■□□□□ 0.63
KARS-207ENST00000566560 NUP160Q12769 1436 aa18.97■□□□□ 0.63
KARS-207ENST00000566560 CLASP1Q7Z460 1538 aa18.95■□□□□ 0.62
KARS-207ENST00000566560 CTTNBP2Q8WZ74 1663 aa18.93■□□□□ 0.62
KARS-207ENST00000566560 OSCARQ8IYS5 282 aa18.93■□□□□ 0.62
KARS-207ENST00000566560 HOXD11P31277 338 aaPredicted RBP18.91■□□□□ 0.62
KARS-207ENST00000566560 GOLGA3Q08378 1498 aa18.89■□□□□ 0.61
KARS-207ENST00000566560 IQGAP2Q13576 1575 aa18.86■□□□□ 0.61
KARS-207ENST00000566560 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
KARS-207ENST00000566560 KIAA0586Q9BVV6 1533 aa18.85■□□□□ 0.61
KARS-207ENST00000566560 SHROOM2Q13796 1616 aa18.84■□□□□ 0.61
KARS-207ENST00000566560 EHMT2Q96KQ7 1210 aa18.79■□□□□ 0.6
KARS-207ENST00000566560 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
KARS-207ENST00000566560 UGGT2Q9NYU1 1516 aa18.74■□□□□ 0.59
KARS-207ENST00000566560 RIMBP3CA6NJZ7 1639 aa18.73■□□□□ 0.59
KARS-207ENST00000566560 RIMBP3BA6NNM3 1639 aa18.73■□□□□ 0.59
KARS-207ENST00000566560 RIMBP3Q9UFD9 1639 aa18.73■□□□□ 0.59
KARS-207ENST00000566560 UBTFP17480 764 aaKnown RBP18.72■□□□□ 0.59
KARS-207ENST00000566560 ERCC6L2Q5T890 1561 aa18.71■□□□□ 0.59
KARS-207ENST00000566560 PRG4Q92954 1404 aaPredicted RBP18.7■□□□□ 0.58
KARS-207ENST00000566560 DNAJC5Q9H3Z4 198 aa18.7■□□□□ 0.58
KARS-207ENST00000566560 JPH4Q96JJ6 628 aa18.69■□□□□ 0.58
KARS-207ENST00000566560 KIAA0556O60303 1618 aa18.69■□□□□ 0.58
KARS-207ENST00000566560 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
KARS-207ENST00000566560 SAMD9Q5K651 1589 aa18.66■□□□□ 0.58
KARS-207ENST00000566560 DISP1Q96F81 1524 aa18.65■□□□□ 0.58
KARS-207ENST00000566560 TNIKQ9UKE5 1360 aa18.64■□□□□ 0.57
KARS-207ENST00000566560 CARMIL2Q6F5E8 1435 aa18.64■□□□□ 0.57
KARS-207ENST00000566560 EFCAB5A4FU69 1503 aa18.64■□□□□ 0.57
KARS-207ENST00000566560 ARAP1Q96P48 1450 aa18.61■□□□□ 0.57
KARS-207ENST00000566560 RANGAP1P46060 587 aaPredicted RBP18.59■□□□□ 0.57
KARS-207ENST00000566560 LOC105371045A0A1W2PR82 267 aa18.58■□□□□ 0.56
KARS-207ENST00000566560 ARHGAP35Q9NRY4 1499 aa18.54■□□□□ 0.56
KARS-207ENST00000566560 CLIP1P30622 1438 aa18.53■□□□□ 0.56
KARS-207ENST00000566560 FHOD3Q2V2M9 1422 aa18.53■□□□□ 0.56
KARS-207ENST00000566560 CEP162Q5TB80 1403 aa18.53■□□□□ 0.56
KARS-207ENST00000566560 PTPRGP23470 1445 aa18.49■□□□□ 0.55
KARS-207ENST00000566560 P3H3Q8IVL6 736 aa18.48■□□□□ 0.55
KARS-207ENST00000566560 TTBK1Q5TCY1 1321 aaPredicted RBP18.48■□□□□ 0.55
KARS-207ENST00000566560 CYB5RLQ6IPT4 315 aa18.44■□□□□ 0.54
KARS-207ENST00000566560 ADCY10Q96PN6 1610 aa18.44■□□□□ 0.54
KARS-207ENST00000566560 ABCA8O94911 1581 aa18.43■□□□□ 0.54
KARS-207ENST00000566560 ABCC2Q92887 1545 aa18.42■□□□□ 0.54
KARS-207ENST00000566560 RAPGEF6Q8TEU7 1601 aa18.41■□□□□ 0.54
KARS-207ENST00000566560 PLB1Q6P1J6 1458 aa18.41■□□□□ 0.54
KARS-207ENST00000566560 FMN1Q68DA7 1419 aa18.4■□□□□ 0.54
KARS-207ENST00000566560 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
KARS-207ENST00000566560 UHRF1BP1LA0JNW5 1464 aa18.39■□□□□ 0.53
KARS-207ENST00000566560 PCF11O94913 1555 aaKnown RBP18.38■□□□□ 0.53
KARS-207ENST00000566560 HECW1Q76N89 1606 aa18.36■□□□□ 0.53
KARS-207ENST00000566560 DCAF8L1A6NGE4 600 aa18.34■□□□□ 0.53
KARS-207ENST00000566560 ZCCHC11Q5TAX3 1644 aaKnown RBP18.32■□□□□ 0.52
KARS-207ENST00000566560 NUP153P49790 1475 aaKnown RBP18.32■□□□□ 0.52
KARS-207ENST00000566560 FYCO1Q9BQS8 1478 aa18.31■□□□□ 0.52
KARS-207ENST00000566560 KDM5BQ9UGL1 1544 aa18.29■□□□□ 0.52
KARS-207ENST00000566560 VPS8Q8N3P4 1428 aa18.29■□□□□ 0.52
KARS-207ENST00000566560 CASKIN1Q8WXD9 1431 aa18.29■□□□□ 0.52
KARS-207ENST00000566560 LRRIQ1Q96JM4 1722 aa18.28■□□□□ 0.52
KARS-207ENST00000566560 MAPKBP1O60336 1514 aa18.25■□□□□ 0.51
KARS-207ENST00000566560 CDK13Q14004 1512 aaKnown RBP18.24■□□□□ 0.51
KARS-207ENST00000566560 EPRSP07814 1512 aaKnown RBP18.23■□□□□ 0.51
KARS-207ENST00000566560 CCDC18Q5T9S5 1454 aa18.23■□□□□ 0.51
KARS-207ENST00000566560 ARID3CA6NKF2 412 aa18.23■□□□□ 0.51
KARS-207ENST00000566560 ATP10BO94823 1461 aa18.22■□□□□ 0.51
KARS-207ENST00000566560 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
KARS-207ENST00000566560 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
KARS-207ENST00000566560 CFAP43Q8NDM7 1665 aa18.2■□□□□ 0.5
KARS-207ENST00000566560 ASXL2Q76L83 1435 aa18.18■□□□□ 0.5
KARS-207ENST00000566560 ZBTB22O15209 634 aa18.17■□□□□ 0.5
KARS-207ENST00000566560 WDR7Q9Y4E6 1490 aa18.17■□□□□ 0.5
KARS-207ENST00000566560 FOXD4L1Q9NU39 408 aa18.16■□□□□ 0.5
KARS-207ENST00000566560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.15■□□□□ 0.5
KARS-207ENST00000566560 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
KARS-207ENST00000566560 HNRNPUL2Q1KMD3 747 aaKnown RBP18.15■□□□□ 0.5
KARS-207ENST00000566560 TIAM1Q13009 1591 aa18.14■□□□□ 0.49
KARS-207ENST00000566560 DIP2BQ9P265 1576 aa18.13■□□□□ 0.49
KARS-207ENST00000566560 KIF13AQ9H1H9 1805 aa18.1■□□□□ 0.49
KARS-207ENST00000566560 ABCC10Q5T3U5 1492 aa18.09■□□□□ 0.49
KARS-207ENST00000566560 MAGI3Q5TCQ9 1506 aa18.08■□□□□ 0.49
KARS-207ENST00000566560 KIF14Q15058 1648 aa18.08■□□□□ 0.48
KARS-207ENST00000566560 MAP3K1Q13233 1512 aa18.08■□□□□ 0.48
KARS-207ENST00000566560 EHBP1L1Q8N3D4 1523 aa18.08■□□□□ 0.48
KARS-207ENST00000566560 TROQ12816 1431 aaPredicted RBP18.06■□□□□ 0.48
KARS-207ENST00000566560 CDK11AQ9UQ88 783 aaPredicted RBP18.06■□□□□ 0.48
KARS-207ENST00000566560 GLI2P10070 1586 aa18.05■□□□□ 0.48
KARS-207ENST00000566560 PLEKHD1A6NEE1 506 aa18.05■□□□□ 0.48
KARS-207ENST00000566560 MTUS2Q5JR59 1369 aa18.03■□□□□ 0.48
KARS-207ENST00000566560 ABCA9Q8IUA7 1624 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms