RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 KIAA0586Q9BVV6 1533 aa36.77■■■■□ 3.48
SPG7-214ENST00000566371 JPH4Q96JJ6 628 aa36.75■■■■□ 3.47
SPG7-214ENST00000566371 PRG4Q92954 1404 aaPredicted RBP36.73■■■■□ 3.47
SPG7-214ENST00000566371 RAPGEF2Q9Y4G8 1499 aa36.63■■■■□ 3.45
SPG7-214ENST00000566371 IQGAP2Q13576 1575 aa36.53■■■■□ 3.44
SPG7-214ENST00000566371 PRXQ9BXM0 1461 aa36.45■■■■□ 3.43
SPG7-214ENST00000566371 TRHP20396 242 aaPredicted RBP36.38■■■■□ 3.41
SPG7-214ENST00000566371 CARMIL2Q6F5E8 1435 aa36.37■■■■□ 3.41
SPG7-214ENST00000566371 EEA1Q15075 1411 aa36.36■■■■□ 3.41
SPG7-214ENST00000566371 CTTNBP2Q8WZ74 1663 aa36.33■■■■□ 3.41
SPG7-214ENST00000566371 UGGT2Q9NYU1 1516 aa36.33■■■■□ 3.41
SPG7-214ENST00000566371 CSRNP3Q8WYN3 585 aa36.29■■■■□ 3.4
SPG7-214ENST00000566371 DISP1Q96F81 1524 aa36.27■■■■□ 3.4
SPG7-214ENST00000566371 TNIKQ9UKE5 1360 aa36.27■■■■□ 3.4
SPG7-214ENST00000566371 PTPRGP23470 1445 aa36.25■■■■□ 3.39
SPG7-214ENST00000566371 ADCY10Q96PN6 1610 aa36.24■■■■□ 3.39
SPG7-214ENST00000566371 CHIC1Q5VXU3 224 aa36.23■■■■□ 3.39
SPG7-214ENST00000566371 KIAA0556O60303 1618 aa36.18■■■■□ 3.38
SPG7-214ENST00000566371 NPM1P06748 294 aaKnown RBP eCLIP36.12■■■■□ 3.37
SPG7-214ENST00000566371 MAPKBP1O60336 1514 aa36.1■■■■□ 3.37
SPG7-214ENST00000566371 GOLGA3Q08378 1498 aa36.1■■■■□ 3.37
SPG7-214ENST00000566371 TTBK1Q5TCY1 1321 aaPredicted RBP36.05■■■■□ 3.36
SPG7-214ENST00000566371 UHRF1BP1LA0JNW5 1464 aa36.05■■■■□ 3.36
SPG7-214ENST00000566371 UACAQ9BZF9 1416 aa36.02■■■■□ 3.36
SPG7-214ENST00000566371 FAM9AQ8IZU1 332 aaPredicted RBP36.02■■■■□ 3.36
SPG7-214ENST00000566371 KIF21BO75037 1637 aa36.01■■■■□ 3.36
SPG7-214ENST00000566371 ABCC2Q92887 1545 aa36.01■■■■□ 3.36
SPG7-214ENST00000566371 KIF13AQ9H1H9 1805 aa35.97■■■■□ 3.35
SPG7-214ENST00000566371 ABCC10Q5T3U5 1492 aa35.93■■■■□ 3.34
SPG7-214ENST00000566371 DIP2BQ9P265 1576 aa35.88■■■■□ 3.33
SPG7-214ENST00000566371 SAMD9Q5K651 1589 aa35.86■■■■□ 3.33
SPG7-214ENST00000566371 KDM5BQ9UGL1 1544 aa35.86■■■■□ 3.33
SPG7-214ENST00000566371 PLB1Q6P1J6 1458 aa35.81■■■■□ 3.32
SPG7-214ENST00000566371 ABCA8O94911 1581 aa35.81■■■■□ 3.32
SPG7-214ENST00000566371 FAM69CQ0P6D2 419 aa35.8■■■■□ 3.32
SPG7-214ENST00000566371 ASXL2Q76L83 1435 aa35.78■■■■□ 3.32
SPG7-214ENST00000566371 ZCCHC11Q5TAX3 1644 aaKnown RBP35.77■■■■□ 3.32
SPG7-214ENST00000566371 P3H3Q8IVL6 736 aa35.69■■■■□ 3.3
SPG7-214ENST00000566371 EFCAB5A4FU69 1503 aa35.67■■■■□ 3.3
SPG7-214ENST00000566371 GLI2P10070 1586 aa35.65■■■■□ 3.3
SPG7-214ENST00000566371 UBTFP17480 764 aaKnown RBP35.6■■■■□ 3.29
SPG7-214ENST00000566371 RANGAP1P46060 587 aaPredicted RBP35.59■■■■□ 3.29
SPG7-214ENST00000566371 EPRSP07814 1512 aaKnown RBP35.57■■■■□ 3.29
SPG7-214ENST00000566371 WDR7Q9Y4E6 1490 aa35.57■■■■□ 3.28
SPG7-214ENST00000566371 FHOD3Q2V2M9 1422 aa35.57■■■■□ 3.28
SPG7-214ENST00000566371 RAPGEF6Q8TEU7 1601 aa35.55■■■■□ 3.28
SPG7-214ENST00000566371 EHMT2Q96KQ7 1210 aa35.53■■■■□ 3.28
SPG7-214ENST00000566371 TSPOAP1O95153 1857 aa35.52■■■■□ 3.28
SPG7-214ENST00000566371 ATP10BO94823 1461 aa35.48■■■■□ 3.27
SPG7-214ENST00000566371 MAP3K4Q9Y6R4 1608 aa35.47■■■■□ 3.27
SPG7-214ENST00000566371 PPRC1Q5VV67 1664 aaKnown RBP35.43■■■■□ 3.26
SPG7-214ENST00000566371 NUP153P49790 1475 aaKnown RBP35.41■■■■□ 3.26
SPG7-214ENST00000566371 ARHGAP35Q9NRY4 1499 aa35.38■■■■□ 3.25
SPG7-214ENST00000566371 KDM6BO15054 1643 aa35.36■■■■□ 3.25
SPG7-214ENST00000566371 ARID3CA6NKF2 412 aa35.36■■■■□ 3.25
SPG7-214ENST00000566371 TEX14Q8IWB6 1497 aa35.33■■■■□ 3.25
SPG7-214ENST00000566371 CFAP43Q8NDM7 1665 aa35.33■■■■□ 3.25
SPG7-214ENST00000566371 FMN1Q68DA7 1419 aa35.32■■■■□ 3.24
SPG7-214ENST00000566371 KCNH8Q96L42 1107 aa35.3■■■■□ 3.24
SPG7-214ENST00000566371 CD109Q6YHK3 1445 aa35.24■■■■□ 3.23
SPG7-214ENST00000566371 MAGI3Q5TCQ9 1506 aa35.23■■■■□ 3.23
SPG7-214ENST00000566371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.23■■■■□ 3.23
SPG7-214ENST00000566371 HNRNPUL2Q1KMD3 747 aaKnown RBP35.23■■■■□ 3.23
SPG7-214ENST00000566371 ABCA9Q8IUA7 1624 aa35.19■■■■□ 3.22
SPG7-214ENST00000566371 HECW1Q76N89 1606 aa35.18■■■■□ 3.22
SPG7-214ENST00000566371 PLEKHD1A6NEE1 506 aa35.12■■■■□ 3.21
SPG7-214ENST00000566371 CDK13Q14004 1512 aaKnown RBP35.11■■■■□ 3.21
SPG7-214ENST00000566371 COL17A1Q9UMD9 1497 aaPredicted RBP35.09■■■■□ 3.21
SPG7-214ENST00000566371 CLIP1P30622 1438 aa35.07■■■■□ 3.21
SPG7-214ENST00000566371 ATP1B4Q9UN42 357 aaPredicted RBP35.01■■■■□ 3.2
SPG7-214ENST00000566371 CASKIN1Q8WXD9 1431 aa35■■■■□ 3.19
SPG7-214ENST00000566371 PCF11O94913 1555 aaKnown RBP34.98■■■■□ 3.19
SPG7-214ENST00000566371 PHLDB1Q86UU1 1377 aa34.97■■■■□ 3.19
SPG7-214ENST00000566371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.96■■■■□ 3.19
SPG7-214ENST00000566371 LRRIQ1Q96JM4 1722 aa34.95■■■■□ 3.19
SPG7-214ENST00000566371 ARAP3Q8WWN8 1544 aa34.95■■■■□ 3.19
SPG7-214ENST00000566371 CDK11AQ9UQ88 783 aaPredicted RBP34.94■■■■□ 3.18
SPG7-214ENST00000566371 NEO1Q92859 1461 aa34.94■■■■□ 3.18
SPG7-214ENST00000566371 FYCO1Q9BQS8 1478 aa34.92■■■■□ 3.18
SPG7-214ENST00000566371 CCDC18Q5T9S5 1454 aa34.91■■■■□ 3.18
SPG7-214ENST00000566371 TTC37Q6PGP7 1564 aa34.91■■■■□ 3.18
SPG7-214ENST00000566371 TROQ12816 1431 aaPredicted RBP34.85■■■■□ 3.17
SPG7-214ENST00000566371 CEP162Q5TB80 1403 aa34.85■■■■□ 3.17
SPG7-214ENST00000566371 CFAP74Q9C0B2 1584 aa34.83■■■■□ 3.17
SPG7-214ENST00000566371 KIF14Q15058 1648 aa34.81■■■■□ 3.16
SPG7-214ENST00000566371 FANCAO15360 1455 aa34.78■■■■□ 3.16
SPG7-214ENST00000566371 AEBP2Q6ZN18 517 aaPredicted RBP34.76■■■■□ 3.16
SPG7-214ENST00000566371 PLCH2O75038 1416 aa34.75■■■■□ 3.15
SPG7-214ENST00000566371 MYO5CQ9NQX4 1742 aa34.73■■■■□ 3.15
SPG7-214ENST00000566371 AKNAQ7Z591 1439 aa34.72■■■■□ 3.15
SPG7-214ENST00000566371 LOC105371045A0A1W2PR82 267 aa34.7■■■■□ 3.15
SPG7-214ENST00000566371 FRMPD1Q5SYB0 1578 aa34.69■■■■□ 3.14
SPG7-214ENST00000566371 RAPGEF3O95398 923 aa34.66■■■■□ 3.14
SPG7-214ENST00000566371 DENND4BO75064 1496 aaPredicted RBP34.65■■■■□ 3.14
SPG7-214ENST00000566371 KDM4FA0A1W2PPD8 638 aa34.63■■■■□ 3.13
SPG7-214ENST00000566371 RICTORQ6R327 1708 aa34.63■■■■□ 3.13
SPG7-214ENST00000566371 ADGRL1O94910 1474 aa34.59■■■■□ 3.13
SPG7-214ENST00000566371 EFCAB2Q5VUJ9 269 aa34.59■■■■□ 3.13
SPG7-214ENST00000566371 ARHGAP5Q13017 1502 aa34.56■■■■□ 3.12
SPG7-214ENST00000566371 PREX2Q70Z35 1606 aa34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms