RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 TULP1O00294 542 aaPredicted RBP13.87□□□□□ -0.19
SNX29-205ENST00000566228 CHGAP10645 457 aaKnown RBP13.86□□□□□ -0.19
SNX29-205ENST00000566228 MS4A1P11836 297 aa13.86□□□□□ -0.19
SNX29-205ENST00000566228 ARXQ96QS3 562 aa13.86□□□□□ -0.19
SNX29-205ENST00000566228 FGD1P98174 961 aa13.85□□□□□ -0.19
SNX29-205ENST00000566228 PTMSP20962 102 aa13.84□□□□□ -0.19
SNX29-205ENST00000566228 PPM1GO15355 546 aaPredicted RBP13.84□□□□□ -0.19
SNX29-205ENST00000566228 GOLGA6L4A6NEF3 574 aa13.84□□□□□ -0.19
SNX29-205ENST00000566228 HAP1P54257 671 aaPredicted RBP13.84□□□□□ -0.19
SNX29-205ENST00000566228 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNX29-205ENST00000566228 PRM3Q9NNZ6 103 aa13.84□□□□□ -0.19
SNX29-205ENST00000566228 GOLGA6L1Q8N7Z2 621 aa13.83□□□□□ -0.2
SNX29-205ENST00000566228 CLSTN1O94985 981 aa13.83□□□□□ -0.2
SNX29-205ENST00000566228 CDCA8Q53HL2 280 aa13.83□□□□□ -0.2
SNX29-205ENST00000566228 NBR1Q14596 966 aa13.83□□□□□ -0.2
SNX29-205ENST00000566228 CFAP53Q96M91 514 aa13.83□□□□□ -0.2
SNX29-205ENST00000566228 CALRP27797 417 aaKnown RBP13.82□□□□□ -0.2
SNX29-205ENST00000566228 FKBP8Q14318 412 aa13.8□□□□□ -0.2
SNX29-205ENST00000566228 SCRIBQ14160 1630 aa13.78□□□□□ -0.2
SNX29-205ENST00000566228 KRI1Q8N9T8 703 aaKnown RBP13.78□□□□□ -0.2
SNX29-205ENST00000566228 HTATSF1O43719 755 aaKnown RBP13.78□□□□□ -0.2
SNX29-205ENST00000566228 MSNP26038 577 aaKnown RBP13.78□□□□□ -0.2
SNX29-205ENST00000566228 ARID4BQ4LE39 1312 aaPredicted RBP13.78□□□□□ -0.2
SNX29-205ENST00000566228 MCCP23508 829 aa13.77□□□□□ -0.2
SNX29-205ENST00000566228 FTSJ3Q8IY81 847 aaKnown RBP13.77□□□□□ -0.21
SNX29-205ENST00000566228 NAP1L5Q96NT1 182 aaPredicted RBP13.77□□□□□ -0.21
SNX29-205ENST00000566228 NCBP3Q53F19 620 aaKnown RBP13.77□□□□□ -0.21
SNX29-205ENST00000566228 SETQ01105 290 aaPredicted RBP13.76□□□□□ -0.21
SNX29-205ENST00000566228 TNNT3P45378 269 aaPredicted RBP13.76□□□□□ -0.21
SNX29-205ENST00000566228 C14orf37Q86TY3 774 aa13.75□□□□□ -0.21
SNX29-205ENST00000566228 KCNJ4P48050 445 aa13.75□□□□□ -0.21
SNX29-205ENST00000566228 A0A0U1RQG5 324 aaPredicted RBP13.75□□□□□ -0.21
SNX29-205ENST00000566228 ZNF777Q9ULD5 760 aaPredicted RBP13.74□□□□□ -0.21
SNX29-205ENST00000566228 CHMP4AQ9BY43 222 aa13.74□□□□□ -0.21
SNX29-205ENST00000566228 CEP89Q96ST8 783 aa13.74□□□□□ -0.21
SNX29-205ENST00000566228 TPM4P67936 248 aa13.74□□□□□ -0.21
SNX29-205ENST00000566228 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
SNX29-205ENST00000566228 FAM9BQ8IZU0 186 aa13.71□□□□□ -0.21
SNX29-205ENST00000566228 GNL2Q13823 731 aaKnown RBP13.7□□□□□ -0.22
SNX29-205ENST00000566228 PPP1R15AO75807 674 aaPredicted RBP13.7□□□□□ -0.22
SNX29-205ENST00000566228 DRC7Q8IY82 874 aa13.7□□□□□ -0.22
SNX29-205ENST00000566228 ANO8Q9HCE9 1232 aaPredicted RBP13.7□□□□□ -0.22
SNX29-205ENST00000566228 PLCB2Q00722 1185 aa13.69□□□□□ -0.22
SNX29-205ENST00000566228 TSPY4P0CV99 314 aa13.68□□□□□ -0.22
SNX29-205ENST00000566228 TSPY10P0CW01 314 aa13.68□□□□□ -0.22
SNX29-205ENST00000566228 ARID3CA6NKF2 412 aa13.68□□□□□ -0.22
SNX29-205ENST00000566228 HSP90AB1P08238 724 aaKnown RBP13.68□□□□□ -0.22
SNX29-205ENST00000566228 OS9Q13438 667 aaPredicted RBP13.67□□□□□ -0.22
SNX29-205ENST00000566228 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
SNX29-205ENST00000566228 NUDCQ9Y266 331 aa13.66□□□□□ -0.22
SNX29-205ENST00000566228 LOC105371045A0A1W2PR82 267 aa13.65□□□□□ -0.22
SNX29-205ENST00000566228 MRS2Q9HD23 443 aa13.63□□□□□ -0.23
SNX29-205ENST00000566228 MAPK8IP3Q9UPT6 1336 aa13.62□□□□□ -0.23
SNX29-205ENST00000566228 CSPP1Q1MSJ5 1256 aa13.62□□□□□ -0.23
SNX29-205ENST00000566228 HDAC5Q9UQL6 1122 aa13.61□□□□□ -0.23
SNX29-205ENST00000566228 NAP1L2Q9ULW6 460 aaPredicted RBP13.61□□□□□ -0.23
SNX29-205ENST00000566228 HSCBQ8IWL3 235 aa13.6□□□□□ -0.23
SNX29-205ENST00000566228 CHMP4CQ96CF2 233 aa13.6□□□□□ -0.23
SNX29-205ENST00000566228 CCDC70Q6NSX1 233 aa13.59□□□□□ -0.23
SNX29-205ENST00000566228 KIAA1211Q6ZU35 1233 aa13.57□□□□□ -0.24
SNX29-205ENST00000566228 SALL2Q9Y467 1007 aaPredicted RBP13.57□□□□□ -0.24
SNX29-205ENST00000566228 RRP12Q5JTH9 1297 aaKnown RBP13.57□□□□□ -0.24
SNX29-205ENST00000566228 KNSTRNQ9Y448 316 aa13.56□□□□□ -0.24
SNX29-205ENST00000566228 ZBTB7CA1YPR0 619 aa13.56□□□□□ -0.24
SNX29-205ENST00000566228 TPM3P06753 285 aa13.56□□□□□ -0.24
SNX29-205ENST00000566228 ISY1Q9ULR0 285 aaKnown RBP13.56□□□□□ -0.24
SNX29-205ENST00000566228 GPS2Q13227 327 aa13.56□□□□□ -0.24
SNX29-205ENST00000566228 PHF14O94880 888 aa13.54□□□□□ -0.24
SNX29-205ENST00000566228 HDGFP51858 240 aaKnown RBP13.54□□□□□ -0.24
SNX29-205ENST00000566228 KIF3AQ9Y496 699 aa13.54□□□□□ -0.24
SNX29-205ENST00000566228 HMMRO75330 724 aa13.54□□□□□ -0.24
SNX29-205ENST00000566228 TSR1Q2NL82 804 aaKnown RBP13.53□□□□□ -0.24
SNX29-205ENST00000566228 GBP4Q96PP9 640 aa13.53□□□□□ -0.24
SNX29-205ENST00000566228 P3H3Q8IVL6 736 aa13.51□□□□□ -0.25
SNX29-205ENST00000566228 GPATCH3Q96I76 525 aa13.51□□□□□ -0.25
SNX29-205ENST00000566228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNX29-205ENST00000566228 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNX29-205ENST00000566228 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
SNX29-205ENST00000566228 CALD1Q05682 793 aaKnown RBP13.49□□□□□ -0.25
SNX29-205ENST00000566228 TPM2P07951 284 aa13.48□□□□□ -0.25
SNX29-205ENST00000566228 CCDC180Q9P1Z9 1646 aa13.48□□□□□ -0.25
SNX29-205ENST00000566228 DDX10Q13206 875 aaKnown RBP13.47□□□□□ -0.25
SNX29-205ENST00000566228 TPM1P09493 284 aa13.47□□□□□ -0.25
SNX29-205ENST00000566228 CDR1P51861 262 aa13.47□□□□□ -0.25
SNX29-205ENST00000566228 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
SNX29-205ENST00000566228 ERCC6Q03468 1493 aa13.45□□□□□ -0.26
SNX29-205ENST00000566228 RDXP35241 583 aaKnown RBP13.45□□□□□ -0.26
SNX29-205ENST00000566228 RSF1Q96T23 1441 aaPredicted RBP13.44□□□□□ -0.26
SNX29-205ENST00000566228 HSP90B1P14625 803 aaKnown RBP13.43□□□□□ -0.26
SNX29-205ENST00000566228 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
SNX29-205ENST00000566228 TPRNQ4KMQ1 711 aa13.43□□□□□ -0.26
SNX29-205ENST00000566228 MTUS2Q5JR59 1369 aa13.42□□□□□ -0.26
SNX29-205ENST00000566228 IPO8O15397 1037 aaKnown RBP13.42□□□□□ -0.26
SNX29-205ENST00000566228 GOLGA6L3A6NEY3 463 aa13.41□□□□□ -0.26
SNX29-205ENST00000566228 RASSF8Q8NHQ8 419 aa13.41□□□□□ -0.26
SNX29-205ENST00000566228 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
SNX29-205ENST00000566228 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
SNX29-205ENST00000566228 G3V3G9 751 aa13.39□□□□□ -0.27
SNX29-205ENST00000566228 DCAF8Q5TAQ9 597 aa13.39□□□□□ -0.27
SNX29-205ENST00000566228 IPO7O95373 1038 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms