RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 RIMBP3Q9UFD9 1639 aa24.29■■□□□ 1.48
SPG7-213ENST00000566221 CEP170Q5SW79 1584 aa24.28■■□□□ 1.48
SPG7-213ENST00000566221 NUP160Q12769 1436 aa24.26■■□□□ 1.47
SPG7-213ENST00000566221 TRHP20396 242 aaPredicted RBP24.22■■□□□ 1.47
SPG7-213ENST00000566221 CLASP1Q7Z460 1538 aa24.19■■□□□ 1.46
SPG7-213ENST00000566221 CYB5RLQ6IPT4 315 aa24.18■■□□□ 1.46
SPG7-213ENST00000566221 IQGAP2Q13576 1575 aa24.16■■□□□ 1.46
SPG7-213ENST00000566221 KIAA0586Q9BVV6 1533 aa24.15■■□□□ 1.46
SPG7-213ENST00000566221 AEBP2Q6ZN18 517 aaPredicted RBP24.14■■□□□ 1.45
SPG7-213ENST00000566221 ARHGEF11O15085 1522 aa24.14■■□□□ 1.45
SPG7-213ENST00000566221 EHMT2Q96KQ7 1210 aa24.1■■□□□ 1.45
SPG7-213ENST00000566221 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
SPG7-213ENST00000566221 UBTFP17480 764 aaKnown RBP24.08■■□□□ 1.45
SPG7-213ENST00000566221 TNIKQ9UKE5 1360 aa24.03■■□□□ 1.44
SPG7-213ENST00000566221 UGGT2Q9NYU1 1516 aa24.01■■□□□ 1.43
SPG7-213ENST00000566221 LOC105371045A0A1W2PR82 267 aa23.99■■□□□ 1.43
SPG7-213ENST00000566221 SAMD9Q5K651 1589 aa23.95■■□□□ 1.42
SPG7-213ENST00000566221 EFCAB5A4FU69 1503 aa23.94■■□□□ 1.42
SPG7-213ENST00000566221 KIAA0556O60303 1618 aa23.92■■□□□ 1.42
SPG7-213ENST00000566221 JPH4Q96JJ6 628 aa23.91■■□□□ 1.42
SPG7-213ENST00000566221 PRG4Q92954 1404 aaPredicted RBP23.89■■□□□ 1.41
SPG7-213ENST00000566221 DISP1Q96F81 1524 aa23.89■■□□□ 1.41
SPG7-213ENST00000566221 CEP162Q5TB80 1403 aa23.87■■□□□ 1.41
SPG7-213ENST00000566221 CARMIL2Q6F5E8 1435 aa23.87■■□□□ 1.41
SPG7-213ENST00000566221 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
SPG7-213ENST00000566221 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
SPG7-213ENST00000566221 CLIP1P30622 1438 aa23.84■■□□□ 1.41
SPG7-213ENST00000566221 ARHGAP35Q9NRY4 1499 aa23.81■■□□□ 1.4
SPG7-213ENST00000566221 RANGAP1P46060 587 aaPredicted RBP23.8■■□□□ 1.4
SPG7-213ENST00000566221 FHOD3Q2V2M9 1422 aa23.74■■□□□ 1.39
SPG7-213ENST00000566221 P3H3Q8IVL6 736 aa23.68■■□□□ 1.38
SPG7-213ENST00000566221 PTPRGP23470 1445 aa23.66■■□□□ 1.38
SPG7-213ENST00000566221 FMN1Q68DA7 1419 aa23.65■■□□□ 1.38
SPG7-213ENST00000566221 RAPGEF6Q8TEU7 1601 aa23.62■■□□□ 1.37
SPG7-213ENST00000566221 ABCA8O94911 1581 aa23.6■■□□□ 1.37
SPG7-213ENST00000566221 PCF11O94913 1555 aaKnown RBP23.59■■□□□ 1.37
SPG7-213ENST00000566221 TTBK1Q5TCY1 1321 aaPredicted RBP23.57■■□□□ 1.36
SPG7-213ENST00000566221 HECW1Q76N89 1606 aa23.56■■□□□ 1.36
SPG7-213ENST00000566221 ABCC2Q92887 1545 aa23.55■■□□□ 1.36
SPG7-213ENST00000566221 VPS8Q8N3P4 1428 aa23.55■■□□□ 1.36
SPG7-213ENST00000566221 PLB1Q6P1J6 1458 aa23.55■■□□□ 1.36
SPG7-213ENST00000566221 ADCY10Q96PN6 1610 aa23.55■■□□□ 1.36
SPG7-213ENST00000566221 UACAQ9BZF9 1416 aa23.54■■□□□ 1.36
SPG7-213ENST00000566221 FYCO1Q9BQS8 1478 aa23.54■■□□□ 1.36
SPG7-213ENST00000566221 UHRF1BP1LA0JNW5 1464 aa23.53■■□□□ 1.36
SPG7-213ENST00000566221 CASKIN1Q8WXD9 1431 aa23.5■■□□□ 1.35
SPG7-213ENST00000566221 LRRIQ1Q96JM4 1722 aa23.5■■□□□ 1.35
SPG7-213ENST00000566221 NUP153P49790 1475 aaKnown RBP23.46■■□□□ 1.35
SPG7-213ENST00000566221 ZCCHC11Q5TAX3 1644 aaKnown RBP23.44■■□□□ 1.34
SPG7-213ENST00000566221 CFAP43Q8NDM7 1665 aa23.41■■□□□ 1.34
SPG7-213ENST00000566221 CCDC18Q5T9S5 1454 aa23.41■■□□□ 1.34
SPG7-213ENST00000566221 KDM5BQ9UGL1 1544 aa23.4■■□□□ 1.34
SPG7-213ENST00000566221 EPRSP07814 1512 aaKnown RBP23.38■■□□□ 1.33
SPG7-213ENST00000566221 CDK13Q14004 1512 aaKnown RBP23.36■■□□□ 1.33
SPG7-213ENST00000566221 ATP1B4Q9UN42 357 aaPredicted RBP23.35■■□□□ 1.33
SPG7-213ENST00000566221 ATP10BO94823 1461 aa23.34■■□□□ 1.33
SPG7-213ENST00000566221 TIAM1Q13009 1591 aa23.33■■□□□ 1.33
SPG7-213ENST00000566221 MAP3K1Q13233 1512 aa23.31■■□□□ 1.32
SPG7-213ENST00000566221 MAPKBP1O60336 1514 aa23.29■■□□□ 1.32
SPG7-213ENST00000566221 ARID3CA6NKF2 412 aa23.27■■□□□ 1.32
SPG7-213ENST00000566221 NPM1P06748 294 aaKnown RBP eCLIP23.27■■□□□ 1.32
SPG7-213ENST00000566221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.22■■□□□ 1.31
SPG7-213ENST00000566221 APLP2Q06481 763 aa23.22■■□□□ 1.31
SPG7-213ENST00000566221 HNRNPUL2Q1KMD3 747 aaKnown RBP23.22■■□□□ 1.31
SPG7-213ENST00000566221 EHBP1L1Q8N3D4 1523 aa23.22■■□□□ 1.31
SPG7-213ENST00000566221 ASXL2Q76L83 1435 aa23.21■■□□□ 1.31
SPG7-213ENST00000566221 WDR7Q9Y4E6 1490 aa23.21■■□□□ 1.31
SPG7-213ENST00000566221 MAGI3Q5TCQ9 1506 aa23.19■■□□□ 1.3
SPG7-213ENST00000566221 CDK11AQ9UQ88 783 aaPredicted RBP23.19■■□□□ 1.3
SPG7-213ENST00000566221 KIF14Q15058 1648 aa23.17■■□□□ 1.3
SPG7-213ENST00000566221 LRRC9Q6ZRR7 1453 aa23.17■■□□□ 1.3
SPG7-213ENST00000566221 TROQ12816 1431 aaPredicted RBP23.16■■□□□ 1.3
SPG7-213ENST00000566221 SUPT6HQ7KZ85 1726 aaKnown RBP23.15■■□□□ 1.3
SPG7-213ENST00000566221 MTUS2Q5JR59 1369 aa23.14■■□□□ 1.3
SPG7-213ENST00000566221 PLEKHD1A6NEE1 506 aa23.14■■□□□ 1.29
SPG7-213ENST00000566221 DIP2BQ9P265 1576 aa23.11■■□□□ 1.29
SPG7-213ENST00000566221 KIF13AQ9H1H9 1805 aa23.11■■□□□ 1.29
SPG7-213ENST00000566221 ILDR1Q86SU0 546 aaPredicted RBP23.1■■□□□ 1.29
SPG7-213ENST00000566221 ABCA9Q8IUA7 1624 aa23.08■■□□□ 1.28
SPG7-213ENST00000566221 GLI2P10070 1586 aa23.06■■□□□ 1.28
SPG7-213ENST00000566221 ABCC10Q5T3U5 1492 aa23.06■■□□□ 1.28
SPG7-213ENST00000566221 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
SPG7-213ENST00000566221 KANK4Q5T7N3 995 aaPredicted RBP23.05■■□□□ 1.28
SPG7-213ENST00000566221 MYO5CQ9NQX4 1742 aa23.05■■□□□ 1.28
SPG7-213ENST00000566221 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.04■■□□□ 1.28
SPG7-213ENST00000566221 ITSN2Q9NZM3 1697 aa23.03■■□□□ 1.28
SPG7-213ENST00000566221 MAP3K4Q9Y6R4 1608 aa23.02■■□□□ 1.28
SPG7-213ENST00000566221 CDC42BPAQ5VT25 1732 aa23.02■■□□□ 1.28
SPG7-213ENST00000566221 NCOA2Q15596 1464 aa23.01■■□□□ 1.27
SPG7-213ENST00000566221 KCNH8Q96L42 1107 aa23■■□□□ 1.27
SPG7-213ENST00000566221 PREX2Q70Z35 1606 aa22.99■■□□□ 1.27
SPG7-213ENST00000566221 CDC42BPBQ9Y5S2 1711 aa22.95■■□□□ 1.26
SPG7-213ENST00000566221 TSPOAP1O95153 1857 aa22.94■■□□□ 1.26
SPG7-213ENST00000566221 ARAP3Q8WWN8 1544 aa22.92■■□□□ 1.26
SPG7-213ENST00000566221 FAM69CQ0P6D2 419 aa22.92■■□□□ 1.26
SPG7-213ENST00000566221 CCNB3Q8WWL7 1395 aa22.91■■□□□ 1.26
SPG7-213ENST00000566221 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
SPG7-213ENST00000566221 PPRC1Q5VV67 1664 aaKnown RBP22.9■■□□□ 1.26
SPG7-213ENST00000566221 CFAP74Q9C0B2 1584 aa22.9■■□□□ 1.26
SPG7-213ENST00000566221 KDM4FA0A1W2PPD8 638 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms