RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 KIF27Q86VH2 1401 aa33.08■■■□□ 2.89
ABCA3-204ENST00000566200 CUL7Q14999 1698 aa33.07■■■□□ 2.88
ABCA3-204ENST00000566200 KIF13AQ9H1H9 1805 aa33■■■□□ 2.87
ABCA3-204ENST00000566200 KIAA0586Q9BVV6 1533 aa33■■■□□ 2.87
ABCA3-204ENST00000566200 ADCY10Q96PN6 1610 aa32.9■■■□□ 2.86
ABCA3-204ENST00000566200 CARMIL1Q5VZK9 1371 aa32.85■■■□□ 2.85
ABCA3-204ENST00000566200 MAPKBP1O60336 1514 aa32.83■■■□□ 2.85
ABCA3-204ENST00000566200 ABCC10Q5T3U5 1492 aa32.79■■■□□ 2.84
ABCA3-204ENST00000566200 DIP2BQ9P265 1576 aa32.75■■■□□ 2.83
ABCA3-204ENST00000566200 NPM1P06748 294 aaKnown RBP eCLIP32.73■■■□□ 2.83
ABCA3-204ENST00000566200 FAM69CQ0P6D2 419 aa32.7■■■□□ 2.83
ABCA3-204ENST00000566200 IQGAP2Q13576 1575 aa32.7■■■□□ 2.82
ABCA3-204ENST00000566200 PTPRGP23470 1445 aa32.67■■■□□ 2.82
ABCA3-204ENST00000566200 AEBP2Q6ZN18 517 aaPredicted RBP32.62■■■□□ 2.81
ABCA3-204ENST00000566200 CARMIL2Q6F5E8 1435 aa32.61■■■□□ 2.81
ABCA3-204ENST00000566200 TNIKQ9UKE5 1360 aa32.61■■■□□ 2.81
ABCA3-204ENST00000566200 DISP1Q96F81 1524 aa32.57■■■□□ 2.8
ABCA3-204ENST00000566200 RAPGEF2Q9Y4G8 1499 aa32.57■■■□□ 2.8
ABCA3-204ENST00000566200 TTBK1Q5TCY1 1321 aaPredicted RBP32.56■■■□□ 2.8
ABCA3-204ENST00000566200 ABCC2Q92887 1545 aa32.53■■■□□ 2.8
ABCA3-204ENST00000566200 TSPOAP1O95153 1857 aa32.5■■■□□ 2.79
ABCA3-204ENST00000566200 UGGT2Q9NYU1 1516 aa32.5■■■□□ 2.79
ABCA3-204ENST00000566200 UHRF1BP1LA0JNW5 1464 aa32.48■■■□□ 2.79
ABCA3-204ENST00000566200 KDM6BO15054 1643 aa32.43■■■□□ 2.78
ABCA3-204ENST00000566200 UACAQ9BZF9 1416 aa32.43■■■□□ 2.78
ABCA3-204ENST00000566200 KIAA0556O60303 1618 aa32.42■■■□□ 2.78
ABCA3-204ENST00000566200 ASXL2Q76L83 1435 aa32.42■■■□□ 2.78
ABCA3-204ENST00000566200 CTTNBP2Q8WZ74 1663 aa32.37■■■□□ 2.77
ABCA3-204ENST00000566200 PLB1Q6P1J6 1458 aa32.37■■■□□ 2.77
ABCA3-204ENST00000566200 GLI2P10070 1586 aa32.36■■■□□ 2.77
ABCA3-204ENST00000566200 PPRC1Q5VV67 1664 aaKnown RBP32.35■■■□□ 2.77
ABCA3-204ENST00000566200 KDM5BQ9UGL1 1544 aa32.35■■■□□ 2.77
ABCA3-204ENST00000566200 ZCCHC11Q5TAX3 1644 aaKnown RBP32.3■■■□□ 2.76
ABCA3-204ENST00000566200 PRXQ9BXM0 1461 aa32.27■■■□□ 2.76
ABCA3-204ENST00000566200 EPRSP07814 1512 aaKnown RBP32.23■■■□□ 2.75
ABCA3-204ENST00000566200 MAP3K4Q9Y6R4 1608 aa32.22■■■□□ 2.75
ABCA3-204ENST00000566200 GOLGA3Q08378 1498 aa32.16■■■□□ 2.74
ABCA3-204ENST00000566200 ABCA8O94911 1581 aa32.14■■■□□ 2.74
ABCA3-204ENST00000566200 KDM4FA0A1W2PPD8 638 aa32.12■■■□□ 2.73
ABCA3-204ENST00000566200 COL17A1Q9UMD9 1497 aaPredicted RBP32.1■■■□□ 2.73
ABCA3-204ENST00000566200 WDR7Q9Y4E6 1490 aa32.1■■■□□ 2.73
ABCA3-204ENST00000566200 TEX14Q8IWB6 1497 aa32.02■■■□□ 2.72
ABCA3-204ENST00000566200 CSRNP3Q8WYN3 585 aa31.94■■■□□ 2.7
ABCA3-204ENST00000566200 CFAP43Q8NDM7 1665 aa31.93■■■□□ 2.7
ABCA3-204ENST00000566200 SAMD9Q5K651 1589 aa31.91■■■□□ 2.7
ABCA3-204ENST00000566200 P3H3Q8IVL6 736 aa31.9■■■□□ 2.7
ABCA3-204ENST00000566200 MAGI3Q5TCQ9 1506 aa31.89■■■□□ 2.7
ABCA3-204ENST00000566200 CD109Q6YHK3 1445 aa31.88■■■□□ 2.69
ABCA3-204ENST00000566200 KCNH8Q96L42 1107 aa31.87■■■□□ 2.69
ABCA3-204ENST00000566200 ADGRL1O94910 1474 aa31.86■■■□□ 2.69
ABCA3-204ENST00000566200 ATP10BO94823 1461 aa31.84■■■□□ 2.69
ABCA3-204ENST00000566200 ARID3CA6NKF2 412 aa31.8■■■□□ 2.68
ABCA3-204ENST00000566200 EEA1Q15075 1411 aa31.8■■■□□ 2.68
ABCA3-204ENST00000566200 RAPGEF6Q8TEU7 1601 aa31.77■■■□□ 2.68
ABCA3-204ENST00000566200 ABCA9Q8IUA7 1624 aa31.71■■■□□ 2.67
ABCA3-204ENST00000566200 FAM9AQ8IZU1 332 aaPredicted RBP31.69■■■□□ 2.66
ABCA3-204ENST00000566200 NUP153P49790 1475 aaKnown RBP31.66■■■□□ 2.66
ABCA3-204ENST00000566200 FHOD3Q2V2M9 1422 aa31.65■■■□□ 2.66
ABCA3-204ENST00000566200 ARAP3Q8WWN8 1544 aa31.65■■■□□ 2.66
ABCA3-204ENST00000566200 KIF21BO75037 1637 aa31.64■■■□□ 2.65
ABCA3-204ENST00000566200 RANGAP1P46060 587 aaPredicted RBP31.63■■■□□ 2.65
ABCA3-204ENST00000566200 EFCAB5A4FU69 1503 aa31.54■■■□□ 2.64
ABCA3-204ENST00000566200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.52■■■□□ 2.64
ABCA3-204ENST00000566200 HNRNPUL2Q1KMD3 747 aaKnown RBP31.52■■■□□ 2.64
ABCA3-204ENST00000566200 PHLDB1Q86UU1 1377 aa31.5■■■□□ 2.63
ABCA3-204ENST00000566200 NEO1Q92859 1461 aa31.49■■■□□ 2.63
ABCA3-204ENST00000566200 FRMPD1Q5SYB0 1578 aa31.46■■■□□ 2.63
ABCA3-204ENST00000566200 HECW2Q9P2P5 1572 aa31.45■■■□□ 2.63
ABCA3-204ENST00000566200 RAPGEF3O95398 923 aa31.43■■■□□ 2.62
ABCA3-204ENST00000566200 PLEKHD1A6NEE1 506 aa31.38■■■□□ 2.61
ABCA3-204ENST00000566200 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.38■■■□□ 2.61
ABCA3-204ENST00000566200 CDK13Q14004 1512 aaKnown RBP31.36■■■□□ 2.61
ABCA3-204ENST00000566200 TTC37Q6PGP7 1564 aa31.35■■■□□ 2.61
ABCA3-204ENST00000566200 CHIC1Q5VXU3 224 aa31.35■■■□□ 2.61
ABCA3-204ENST00000566200 ADAMTSL3P82987 1691 aa31.33■■■□□ 2.61
ABCA3-204ENST00000566200 EHMT2Q96KQ7 1210 aa31.33■■■□□ 2.61
ABCA3-204ENST00000566200 RICTORQ6R327 1708 aa31.32■■■□□ 2.6
ABCA3-204ENST00000566200 ARHGAP35Q9NRY4 1499 aa31.29■■■□□ 2.6
ABCA3-204ENST00000566200 FANCAO15360 1455 aa31.28■■■□□ 2.6
ABCA3-204ENST00000566200 UBTFP17480 764 aaKnown RBP31.28■■■□□ 2.6
ABCA3-204ENST00000566200 AKNAQ7Z591 1439 aa31.28■■■□□ 2.6
ABCA3-204ENST00000566200 CFAP74Q9C0B2 1584 aa31.28■■■□□ 2.6
ABCA3-204ENST00000566200 DENND4BO75064 1496 aaPredicted RBP31.26■■■□□ 2.59
ABCA3-204ENST00000566200 BCORL1Q5H9F3 1711 aa31.25■■■□□ 2.59
ABCA3-204ENST00000566200 ARHGEF40Q8TER5 1519 aa31.24■■■□□ 2.59
ABCA3-204ENST00000566200 HECW1Q76N89 1606 aa31.22■■■□□ 2.59
ABCA3-204ENST00000566200 FMN1Q68DA7 1419 aa31.22■■■□□ 2.59
ABCA3-204ENST00000566200 PTPRMP28827 1452 aa31.21■■■□□ 2.59
ABCA3-204ENST00000566200 ZMYM4Q5VZL5 1548 aa31.18■■■□□ 2.58
ABCA3-204ENST00000566200 MADDQ8WXG6 1647 aa31.17■■■□□ 2.58
ABCA3-204ENST00000566200 LRRIQ1Q96JM4 1722 aa31.15■■■□□ 2.58
ABCA3-204ENST00000566200 PLCH2O75038 1416 aa31.14■■■□□ 2.58
ABCA3-204ENST00000566200 SIGLEC1Q9BZZ2 1709 aa31.13■■■□□ 2.57
ABCA3-204ENST00000566200 ILDR1Q86SU0 546 aaPredicted RBP31.12■■■□□ 2.57
ABCA3-204ENST00000566200 KIF14Q15058 1648 aa31.11■■■□□ 2.57
ABCA3-204ENST00000566200 ARID4BQ4LE39 1312 aaPredicted RBP31.11■■■□□ 2.57
ABCA3-204ENST00000566200 ATP1B4Q9UN42 357 aaPredicted RBP31.11■■■□□ 2.57
ABCA3-204ENST00000566200 MYO5CQ9NQX4 1742 aa31.1■■■□□ 2.57
ABCA3-204ENST00000566200 YEATS2Q9ULM3 1422 aa31.09■■■□□ 2.57
ABCA3-204ENST00000566200 ZFYVE16Q7Z3T8 1539 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms