RNA–Protein interactions for RNA: ENST00000566119.5

EDC3-209, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-209ENST00000566119 CUL7Q14999 1698 aa35.23■■■■□ 3.23
EDC3-209ENST00000566119 PRG4Q92954 1404 aaPredicted RBP35.23■■■■□ 3.23
EDC3-209ENST00000566119 RUSC2Q8N2Y8 1516 aa35.16■■■■□ 3.22
EDC3-209ENST00000566119 KIAA0586Q9BVV6 1533 aa35.14■■■■□ 3.22
EDC3-209ENST00000566119 RAPGEF2Q9Y4G8 1499 aa34.94■■■■□ 3.18
EDC3-209ENST00000566119 IQGAP2Q13576 1575 aa34.8■■■■□ 3.16
EDC3-209ENST00000566119 CARMIL2Q6F5E8 1435 aa34.79■■■■□ 3.16
EDC3-209ENST00000566119 NPM1P06748 294 aaKnown RBP eCLIP34.77■■■■□ 3.16
EDC3-209ENST00000566119 PTPRGP23470 1445 aa34.77■■■■□ 3.16
EDC3-209ENST00000566119 TTBK1Q5TCY1 1321 aaPredicted RBP34.76■■■■□ 3.15
EDC3-209ENST00000566119 TNIKQ9UKE5 1360 aa34.73■■■■□ 3.15
EDC3-209ENST00000566119 PRXQ9BXM0 1461 aa34.71■■■■□ 3.15
EDC3-209ENST00000566119 ADCY10Q96PN6 1610 aa34.66■■■■□ 3.14
EDC3-209ENST00000566119 CSRNP3Q8WYN3 585 aa34.66■■■■□ 3.14
EDC3-209ENST00000566119 DISP1Q96F81 1524 aa34.65■■■■□ 3.14
EDC3-209ENST00000566119 UGGT2Q9NYU1 1516 aa34.63■■■■□ 3.13
EDC3-209ENST00000566119 FAM69CQ0P6D2 419 aa34.53■■■■□ 3.12
EDC3-209ENST00000566119 MAPKBP1O60336 1514 aa34.53■■■■□ 3.12
EDC3-209ENST00000566119 EEA1Q15075 1411 aa34.5■■■■□ 3.11
EDC3-209ENST00000566119 ABCC10Q5T3U5 1492 aa34.49■■■■□ 3.11
EDC3-209ENST00000566119 UACAQ9BZF9 1416 aa34.48■■■■□ 3.11
EDC3-209ENST00000566119 CHIC1Q5VXU3 224 aa34.48■■■■□ 3.11
EDC3-209ENST00000566119 FAM9AQ8IZU1 332 aaPredicted RBP34.48■■■■□ 3.11
EDC3-209ENST00000566119 KIAA0556O60303 1618 aa34.47■■■■□ 3.11
EDC3-209ENST00000566119 CTTNBP2Q8WZ74 1663 aa34.47■■■■□ 3.11
EDC3-209ENST00000566119 ABCC2Q92887 1545 aa34.45■■■■□ 3.11
EDC3-209ENST00000566119 UHRF1BP1LA0JNW5 1464 aa34.45■■■■□ 3.1
EDC3-209ENST00000566119 KIF13AQ9H1H9 1805 aa34.41■■■■□ 3.1
EDC3-209ENST00000566119 GOLGA3Q08378 1498 aa34.41■■■■□ 3.1
EDC3-209ENST00000566119 DIP2BQ9P265 1576 aa34.35■■■■□ 3.09
EDC3-209ENST00000566119 ASXL2Q76L83 1435 aa34.3■■■■□ 3.08
EDC3-209ENST00000566119 P3H3Q8IVL6 736 aa34.29■■■■□ 3.08
EDC3-209ENST00000566119 KDM5BQ9UGL1 1544 aa34.29■■■■□ 3.08
EDC3-209ENST00000566119 PLB1Q6P1J6 1458 aa34.27■■■■□ 3.08
EDC3-209ENST00000566119 RANGAP1P46060 587 aaPredicted RBP34.18■■■■□ 3.06
EDC3-209ENST00000566119 ABCA8O94911 1581 aa34.15■■■■□ 3.06
EDC3-209ENST00000566119 ZCCHC11Q5TAX3 1644 aaKnown RBP34.15■■■■□ 3.06
EDC3-209ENST00000566119 KIF21BO75037 1637 aa34.12■■■■□ 3.05
EDC3-209ENST00000566119 EHMT2Q96KQ7 1210 aa34.1■■■■□ 3.05
EDC3-209ENST00000566119 GLI2P10070 1586 aa34.09■■■■□ 3.05
EDC3-209ENST00000566119 EPRSP07814 1512 aaKnown RBP34.09■■■■□ 3.05
EDC3-209ENST00000566119 SAMD9Q5K651 1589 aa34.08■■■■□ 3.05
EDC3-209ENST00000566119 ARID3CA6NKF2 412 aa34.03■■■■□ 3.04
EDC3-209ENST00000566119 TSPOAP1O95153 1857 aa34.03■■■■□ 3.04
EDC3-209ENST00000566119 WDR7Q9Y4E6 1490 aa34.02■■■■□ 3.04
EDC3-209ENST00000566119 UBTFP17480 764 aaKnown RBP34.02■■■■□ 3.04
EDC3-209ENST00000566119 KCNH8Q96L42 1107 aa33.99■■■■□ 3.03
EDC3-209ENST00000566119 FHOD3Q2V2M9 1422 aa33.96■■■■□ 3.03
EDC3-209ENST00000566119 ATP10BO94823 1461 aa33.95■■■■□ 3.03
EDC3-209ENST00000566119 KDM6BO15054 1643 aa33.93■■■■□ 3.02
EDC3-209ENST00000566119 PPRC1Q5VV67 1664 aaKnown RBP33.89■■■■□ 3.02
EDC3-209ENST00000566119 MAP3K4Q9Y6R4 1608 aa33.88■■■■□ 3.01
EDC3-209ENST00000566119 RAPGEF6Q8TEU7 1601 aa33.86■■■■□ 3.01
EDC3-209ENST00000566119 EFCAB5A4FU69 1503 aa33.85■■■■□ 3.01
EDC3-209ENST00000566119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.85■■■■□ 3.01
EDC3-209ENST00000566119 HNRNPUL2Q1KMD3 747 aaKnown RBP33.85■■■■□ 3.01
EDC3-209ENST00000566119 CD109Q6YHK3 1445 aa33.82■■■■□ 3
EDC3-209ENST00000566119 TEX14Q8IWB6 1497 aa33.82■■■■□ 3
EDC3-209ENST00000566119 NUP153P49790 1475 aaKnown RBP33.81■■■■□ 3
EDC3-209ENST00000566119 AEBP2Q6ZN18 517 aaPredicted RBP33.8■■■■□ 3
EDC3-209ENST00000566119 COL17A1Q9UMD9 1497 aaPredicted RBP33.76■■■■□ 3
EDC3-209ENST00000566119 MAGI3Q5TCQ9 1506 aa33.72■■■□□ 2.99
EDC3-209ENST00000566119 ARHGAP35Q9NRY4 1499 aa33.69■■■□□ 2.98
EDC3-209ENST00000566119 CFAP43Q8NDM7 1665 aa33.69■■■□□ 2.98
EDC3-209ENST00000566119 PLEKHD1A6NEE1 506 aa33.67■■■□□ 2.98
EDC3-209ENST00000566119 FMN1Q68DA7 1419 aa33.62■■■□□ 2.97
EDC3-209ENST00000566119 ATP1B4Q9UN42 357 aaPredicted RBP33.61■■■□□ 2.97
EDC3-209ENST00000566119 ABCA9Q8IUA7 1624 aa33.57■■■□□ 2.96
EDC3-209ENST00000566119 KDM4FA0A1W2PPD8 638 aa33.52■■■□□ 2.96
EDC3-209ENST00000566119 CDK13Q14004 1512 aaKnown RBP33.5■■■□□ 2.95
EDC3-209ENST00000566119 PHLDB1Q86UU1 1377 aa33.47■■■□□ 2.95
EDC3-209ENST00000566119 ARAP3Q8WWN8 1544 aa33.45■■■□□ 2.95
EDC3-209ENST00000566119 HECW1Q76N89 1606 aa33.42■■■□□ 2.94
EDC3-209ENST00000566119 NEO1Q92859 1461 aa33.4■■■□□ 2.94
EDC3-209ENST00000566119 CDK11AQ9UQ88 783 aaPredicted RBP33.4■■■□□ 2.94
EDC3-209ENST00000566119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.38■■■□□ 2.93
EDC3-209ENST00000566119 RAPGEF3O95398 923 aa33.37■■■□□ 2.93
EDC3-209ENST00000566119 CLIP1P30622 1438 aa33.36■■■□□ 2.93
EDC3-209ENST00000566119 CASKIN1Q8WXD9 1431 aa33.31■■■□□ 2.92
EDC3-209ENST00000566119 TTC37Q6PGP7 1564 aa33.29■■■□□ 2.92
EDC3-209ENST00000566119 FANCAO15360 1455 aa33.27■■■□□ 2.92
EDC3-209ENST00000566119 ADGRL1O94910 1474 aa33.27■■■□□ 2.92
EDC3-209ENST00000566119 AKNAQ7Z591 1439 aa33.27■■■□□ 2.92
EDC3-209ENST00000566119 TROQ12816 1431 aaPredicted RBP33.25■■■□□ 2.91
EDC3-209ENST00000566119 PLCH2O75038 1416 aa33.24■■■□□ 2.91
EDC3-209ENST00000566119 PCF11O94913 1555 aaKnown RBP33.22■■■□□ 2.91
EDC3-209ENST00000566119 DENND4BO75064 1496 aaPredicted RBP33.19■■■□□ 2.9
EDC3-209ENST00000566119 LRRIQ1Q96JM4 1722 aa33.19■■■□□ 2.9
EDC3-209ENST00000566119 CCDC18Q5T9S5 1454 aa33.18■■■□□ 2.9
EDC3-209ENST00000566119 EFCAB2Q5VUJ9 269 aa33.16■■■□□ 2.9
EDC3-209ENST00000566119 FYCO1Q9BQS8 1478 aa33.16■■■□□ 2.9
EDC3-209ENST00000566119 KIF14Q15058 1648 aa33.14■■■□□ 2.9
EDC3-209ENST00000566119 FRMPD1Q5SYB0 1578 aa33.14■■■□□ 2.9
EDC3-209ENST00000566119 CFAP74Q9C0B2 1584 aa33.13■■■□□ 2.89
EDC3-209ENST00000566119 LOC105371045A0A1W2PR82 267 aa33.12■■■□□ 2.89
EDC3-209ENST00000566119 CEP162Q5TB80 1403 aa33.09■■■□□ 2.89
EDC3-209ENST00000566119 SCAPERQ9BY12 1400 aa33.09■■■□□ 2.89
EDC3-209ENST00000566119 RICTORQ6R327 1708 aa33.02■■■□□ 2.88
EDC3-209ENST00000566119 MYO5CQ9NQX4 1742 aa33.02■■■□□ 2.88
EDC3-209ENST00000566119 ARHGAP5Q13017 1502 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms