RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 BCANQ96GW7 911 aa5.26□□□□□ -1.57
CHD9-216ENST00000565803 HAP1P54257 671 aaPredicted RBP5.25□□□□□ -1.57
CHD9-216ENST00000565803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.25□□□□□ -1.571e-7■■■■□ 23.5
CHD9-216ENST00000565803 TAOK2Q9UL54 1235 aa5.25□□□□□ -1.57
CHD9-216ENST00000565803 IFT140Q96RY7 1462 aa5.23□□□□□ -1.57
CHD9-216ENST00000565803 DCAF8L2P0C7V8 631 aa5.22□□□□□ -1.57
CHD9-216ENST00000565803 HOMEZQ8IX15 550 aa5.22□□□□□ -1.57
CHD9-216ENST00000565803 APLP2Q06481 763 aa5.22□□□□□ -1.57
CHD9-216ENST00000565803 BAZ1BQ9UIG0 1483 aaKnown RBP5.22□□□□□ -1.57
CHD9-216ENST00000565803 KDM6BO15054 1643 aa5.21□□□□□ -1.58
CHD9-216ENST00000565803 PODXL2Q9NZ53 605 aa5.21□□□□□ -1.58
CHD9-216ENST00000565803 ZNF219Q9P2Y4 722 aaPredicted RBP5.21□□□□□ -1.58
CHD9-216ENST00000565803 CEP164Q9UPV0 1460 aa5.21□□□□□ -1.58
CHD9-216ENST00000565803 EIF4G3O43432 1585 aaKnown RBP5.2□□□□□ -1.58
CHD9-216ENST00000565803 CADPSQ9ULU8 1353 aa5.2□□□□□ -1.58
CHD9-216ENST00000565803 MKRN4PQ13434 485 aaPredicted RBP5.19□□□□□ -1.58
CHD9-216ENST00000565803 TARBP1Q13395 1621 aaKnown RBP5.19□□□□□ -1.58
CHD9-216ENST00000565803 SHROOM2Q13796 1616 aa5.19□□□□□ -1.58
CHD9-216ENST00000565803 HECW2Q9P2P5 1572 aa5.18□□□□□ -1.58
CHD9-216ENST00000565803 MAPKBP1O60336 1514 aa5.17□□□□□ -1.58
CHD9-216ENST00000565803 URB2Q14146 1524 aaKnown RBP5.17□□□□□ -1.58
CHD9-216ENST00000565803 CFTRP13569 1480 aa5.16□□□□□ -1.58
CHD9-216ENST00000565803 SYNJ1O43426 1573 aa5.15□□□□□ -1.58
CHD9-216ENST00000565803 ABCC8Q09428 1581 aa5.15□□□□□ -1.59
CHD9-216ENST00000565803 DSG3P32926 999 aa5.14□□□□□ -1.59
CHD9-216ENST00000565803 FBXO41Q8TF61 875 aa5.14□□□□□ -1.59
CHD9-216ENST00000565803 SPINK5Q9NQ38 1064 aaPredicted RBP5.14□□□□□ -1.59
CHD9-216ENST00000565803 SOCS7O14512 581 aa5.12□□□□□ -1.59
CHD9-216ENST00000565803 FANCD2Q9BXW9 1451 aa5.12□□□□□ -1.59
CHD9-216ENST00000565803 DCAF8L1A6NGE4 600 aa5.11□□□□□ -1.59
CHD9-216ENST00000565803 GLI2P10070 1586 aa5.11□□□□□ -1.59
CHD9-216ENST00000565803 DIP2BQ9P265 1576 aa5.11□□□□□ -1.59
CHD9-216ENST00000565803 PLCB2Q00722 1185 aa5.11□□□□□ -1.59
CHD9-216ENST00000565803 GTF3C3Q9Y5Q9 886 aa5.11□□□□□ -1.59
CHD9-216ENST00000565803 TOP2BQ02880 1626 aa5.1□□□□□ -1.59
CHD9-216ENST00000565803 EIF5BO60841 1220 aaKnown RBP5.1□□□□□ -1.59
CHD9-216ENST00000565803 PPRC1Q5VV67 1664 aaKnown RBP5.1□□□□□ -1.59
CHD9-216ENST00000565803 MAGI1Q96QZ7 1491 aaPredicted RBP5.09□□□□□ -1.59
CHD9-216ENST00000565803 C14orf37Q86TY3 774 aa5.09□□□□□ -1.6
CHD9-216ENST00000565803 DNMBPQ6XZF7 1577 aa5.09□□□□□ -1.6
CHD9-216ENST00000565803 IQSEC2Q5JU85 1478 aa5.08□□□□□ -1.6
CHD9-216ENST00000565803 KLHL34Q8N239 644 aa5.08□□□□□ -1.6
CHD9-216ENST00000565803 SPATA31D1Q6ZQQ2 1576 aa5.07□□□□□ -1.6
CHD9-216ENST00000565803 ABCC10Q5T3U5 1492 aa5.07□□□□□ -1.6
CHD9-216ENST00000565803 FKBP8Q14318 412 aa5.07□□□□□ -1.6
CHD9-216ENST00000565803 LMTK3Q96Q04 1460 aa5.07□□□□□ -1.6
CHD9-216ENST00000565803 KDM4FA0A1W2PPD8 638 aa5.06□□□□□ -1.6
CHD9-216ENST00000565803 SSUH2Q9Y2M2 353 aa5.05□□□□□ -1.6
CHD9-216ENST00000565803 ZNF608Q9ULD9 1512 aaPredicted RBP5.05□□□□□ -1.6
CHD9-216ENST00000565803 ZBTB12Q9Y330 459 aaPredicted RBP5.04□□□□□ -1.6
CHD9-216ENST00000565803 NPM2Q86SE8 214 aaKnown RBP5.04□□□□□ -1.6
CHD9-216ENST00000565803 SUPT5HO00267 1087 aaKnown RBP5.03□□□□□ -1.6
CHD9-216ENST00000565803 GAPVD1Q14C86 1478 aa5.03□□□□□ -1.6
CHD9-216ENST00000565803 TOPBP1Q92547 1522 aa5.03□□□□□ -1.6
CHD9-216ENST00000565803 ADGRL1O94910 1474 aa5.03□□□□□ -1.6
CHD9-216ENST00000565803 PBRM1Q86U86 1689 aa5.02□□□□□ -1.61
CHD9-216ENST00000565803 ADAMTSL3P82987 1691 aa5.01□□□□□ -1.61
CHD9-216ENST00000565803 KIAA0586Q9BVV6 1533 aa5.01□□□□□ -1.61
CHD9-216ENST00000565803 SYNJ2O15056 1496 aa5□□□□□ -1.61
CHD9-216ENST00000565803 MAP3K4Q9Y6R4 1608 aa5□□□□□ -1.61
CHD9-216ENST00000565803 POLA2Q14181 598 aa4.99□□□□□ -1.61
CHD9-216ENST00000565803 MROH2BQ7Z745 1585 aa4.99□□□□□ -1.61
CHD9-216ENST00000565803 ABCA5Q8WWZ7 1642 aa4.98□□□□□ -1.61
CHD9-216ENST00000565803 SNAPC4Q5SXM2 1469 aa4.98□□□□□ -1.61
CHD9-216ENST00000565803 NUP160Q12769 1436 aa4.98□□□□□ -1.61
CHD9-216ENST00000565803 CEP170Q5SW79 1584 aa4.98□□□□□ -1.61
CHD9-216ENST00000565803 TOP2AP11388 1531 aaKnown RBP4.96□□□□□ -1.62
CHD9-216ENST00000565803 CYB5RLQ6IPT4 315 aa4.95□□□□□ -1.62
CHD9-216ENST00000565803 TRHP20396 242 aaPredicted RBP4.95□□□□□ -1.62
CHD9-216ENST00000565803 ADCY10Q96PN6 1610 aa4.94□□□□□ -1.62
CHD9-216ENST00000565803 SPDYE2BA6NHP3 402 aa4.93□□□□□ -1.62
CHD9-216ENST00000565803 SPDYE6P0CI01 402 aa4.93□□□□□ -1.62
CHD9-216ENST00000565803 SPDYE2Q495Y8 402 aa4.93□□□□□ -1.62
CHD9-216ENST00000565803 PCF11O94913 1555 aaKnown RBP4.93□□□□□ -1.62
CHD9-216ENST00000565803 CAPN15O75808 1086 aa4.93□□□□□ -1.62
CHD9-216ENST00000565803 FBLN2P98095 1184 aa4.93□□□□□ -1.62
CHD9-216ENST00000565803 SPDYE4A6NLX3 237 aa4.93□□□□□ -1.62
CHD9-216ENST00000565803 GRIN2BQ13224 1484 aa4.93□□□□□ -1.62
CHD9-216ENST00000565803 ADAMTS12P58397 1594 aa4.92□□□□□ -1.62
CHD9-216ENST00000565803 TMEM132AQ24JP5 1023 aa4.92□□□□□ -1.62
CHD9-216ENST00000565803 VSIG10Q8N0Z9 540 aa4.91□□□□□ -1.62
CHD9-216ENST00000565803 NBR1Q14596 966 aa4.9□□□□□ -1.62
CHD9-216ENST00000565803 POLA1P09884 1462 aaPredicted RBP4.9□□□□□ -1.62
CHD9-216ENST00000565803 CFAP44Q96MT7 982 aa4.89□□□□□ -1.63
CHD9-216ENST00000565803 UHRF1BP1LA0JNW5 1464 aa4.89□□□□□ -1.63
CHD9-216ENST00000565803 BCORL1Q5H9F3 1711 aa4.88□□□□□ -1.63
CHD9-216ENST00000565803 ILDR2Q71H61 639 aa4.88□□□□□ -1.63
CHD9-216ENST00000565803 RUSC2Q8N2Y8 1516 aa4.87□□□□□ -1.63
CHD9-216ENST00000565803 CACNB1Q02641 598 aaPredicted RBP4.87□□□□□ -1.63
CHD9-216ENST00000565803 TRIM26Q12899 539 aaPredicted RBP4.87□□□□□ -1.63
CHD9-216ENST00000565803 CFAP43Q8NDM7 1665 aa4.87□□□□□ -1.63
CHD9-216ENST00000565803 WIZO95785 1651 aa4.86□□□□□ -1.63
CHD9-216ENST00000565803 TEX14Q8IWB6 1497 aa4.86□□□□□ -1.63
CHD9-216ENST00000565803 ARID3AQ99856 593 aa4.86□□□□□ -1.63
CHD9-216ENST00000565803 GRIN2AQ12879 1464 aa4.86□□□□□ -1.63
CHD9-216ENST00000565803 ABCB7O75027 752 aa4.85□□□□□ -1.63
CHD9-216ENST00000565803 FBXO3Q9UK99 471 aa4.85□□□□□ -1.63
CHD9-216ENST00000565803 ABCA10Q8WWZ4 1543 aa4.85□□□□□ -1.63
CHD9-216ENST00000565803 EPRSP07814 1512 aaKnown RBP4.85□□□□□ -1.63
CHD9-216ENST00000565803 MAGI3Q5TCQ9 1506 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms