RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 PRXQ9BXM0 1461 aa21.14■□□□□ 0.98
CFDP1-205ENST00000565646 GRIN2AQ12879 1464 aa21.1■□□□□ 0.97
CFDP1-205ENST00000565646 RAPGEF2Q9Y4G8 1499 aa21.08■□□□□ 0.97
CFDP1-205ENST00000565646 KIF21BO75037 1637 aa21.07■□□□□ 0.96
CFDP1-205ENST00000565646 AEBP2Q6ZN18 517 aaPredicted RBP21.03■□□□□ 0.96
CFDP1-205ENST00000565646 CEP170Q5SW79 1584 aa21.02■□□□□ 0.95
CFDP1-205ENST00000565646 NUP160Q12769 1436 aa21.01■□□□□ 0.95
CFDP1-205ENST00000565646 ERCC6L2Q5T890 1561 aa20.95■□□□□ 0.94
CFDP1-205ENST00000565646 GOLGA3Q08378 1498 aa20.94■□□□□ 0.94
CFDP1-205ENST00000565646 CTTNBP2Q8WZ74 1663 aa20.92■□□□□ 0.94
CFDP1-205ENST00000565646 EHMT2Q96KQ7 1210 aa20.9■□□□□ 0.94
CFDP1-205ENST00000565646 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
CFDP1-205ENST00000565646 IQGAP2Q13576 1575 aa20.85■□□□□ 0.93
CFDP1-205ENST00000565646 SHROOM2Q13796 1616 aa20.83■□□□□ 0.93
CFDP1-205ENST00000565646 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.93
CFDP1-205ENST00000565646 UBTFP17480 764 aaKnown RBP20.81■□□□□ 0.92
CFDP1-205ENST00000565646 KIF13AQ9H1H9 1805 aa20.78■□□□□ 0.92
CFDP1-205ENST00000565646 TNIKQ9UKE5 1360 aa20.76■□□□□ 0.91
CFDP1-205ENST00000565646 JPH4Q96JJ6 628 aa20.76■□□□□ 0.91
CFDP1-205ENST00000565646 UGGT2Q9NYU1 1516 aa20.75■□□□□ 0.91
CFDP1-205ENST00000565646 PRG4Q92954 1404 aaPredicted RBP20.73■□□□□ 0.91
CFDP1-205ENST00000565646 DISP1Q96F81 1524 aa20.68■□□□□ 0.9
CFDP1-205ENST00000565646 SAMD9Q5K651 1589 aa20.66■□□□□ 0.9
CFDP1-205ENST00000565646 KIAA0556O60303 1618 aa20.64■□□□□ 0.9
CFDP1-205ENST00000565646 NPM1P06748 294 aaKnown RBP eCLIP20.64■□□□□ 0.89
CFDP1-205ENST00000565646 RANGAP1P46060 587 aaPredicted RBP20.62■□□□□ 0.89
CFDP1-205ENST00000565646 FAM69CQ0P6D2 419 aa20.61■□□□□ 0.89
CFDP1-205ENST00000565646 EFCAB5A4FU69 1503 aa20.61■□□□□ 0.89
CFDP1-205ENST00000565646 CARMIL2Q6F5E8 1435 aa20.61■□□□□ 0.89
CFDP1-205ENST00000565646 ARHGAP35Q9NRY4 1499 aa20.6■□□□□ 0.89
CFDP1-205ENST00000565646 CEP162Q5TB80 1403 aa20.6■□□□□ 0.89
CFDP1-205ENST00000565646 CLIP1P30622 1438 aa20.57■□□□□ 0.88
CFDP1-205ENST00000565646 ABCC10Q5T3U5 1492 aa20.56■□□□□ 0.88
CFDP1-205ENST00000565646 P3H3Q8IVL6 736 aa20.55■□□□□ 0.88
CFDP1-205ENST00000565646 FHOD3Q2V2M9 1422 aa20.53■□□□□ 0.88
CFDP1-205ENST00000565646 MAPKBP1O60336 1514 aa20.53■□□□□ 0.88
CFDP1-205ENST00000565646 ADCY10Q96PN6 1610 aa20.53■□□□□ 0.88
CFDP1-205ENST00000565646 TSPOAP1O95153 1857 aa20.53■□□□□ 0.88
CFDP1-205ENST00000565646 DIP2BQ9P265 1576 aa20.51■□□□□ 0.87
CFDP1-205ENST00000565646 PTPRGP23470 1445 aa20.48■□□□□ 0.87
CFDP1-205ENST00000565646 KDM6BO15054 1643 aa20.44■□□□□ 0.86
CFDP1-205ENST00000565646 TTBK1Q5TCY1 1321 aaPredicted RBP20.43■□□□□ 0.86
CFDP1-205ENST00000565646 PLB1Q6P1J6 1458 aa20.41■□□□□ 0.86
CFDP1-205ENST00000565646 ABCA8O94911 1581 aa20.41■□□□□ 0.86
CFDP1-205ENST00000565646 FMN1Q68DA7 1419 aa20.38■□□□□ 0.85
CFDP1-205ENST00000565646 RAPGEF6Q8TEU7 1601 aa20.37■□□□□ 0.85
CFDP1-205ENST00000565646 UACAQ9BZF9 1416 aa20.36■□□□□ 0.85
CFDP1-205ENST00000565646 KDM4FA0A1W2PPD8 638 aa20.36■□□□□ 0.85
CFDP1-205ENST00000565646 ABCC2Q92887 1545 aa20.35■□□□□ 0.85
CFDP1-205ENST00000565646 UHRF1BP1LA0JNW5 1464 aa20.34■□□□□ 0.85
CFDP1-205ENST00000565646 PCF11O94913 1555 aaKnown RBP20.34■□□□□ 0.85
CFDP1-205ENST00000565646 VPS8Q8N3P4 1428 aa20.31■□□□□ 0.84
CFDP1-205ENST00000565646 NUP153P49790 1475 aaKnown RBP20.3■□□□□ 0.84
CFDP1-205ENST00000565646 CASKIN1Q8WXD9 1431 aa20.3■□□□□ 0.84
CFDP1-205ENST00000565646 LRRIQ1Q96JM4 1722 aa20.3■□□□□ 0.84
CFDP1-205ENST00000565646 FYCO1Q9BQS8 1478 aa20.28■□□□□ 0.84
CFDP1-205ENST00000565646 HECW1Q76N89 1606 aa20.27■□□□□ 0.83
CFDP1-205ENST00000565646 KDM5BQ9UGL1 1544 aa20.26■□□□□ 0.83
CFDP1-205ENST00000565646 ASXL2Q76L83 1435 aa20.26■□□□□ 0.83
CFDP1-205ENST00000565646 ZCCHC11Q5TAX3 1644 aaKnown RBP20.24■□□□□ 0.83
CFDP1-205ENST00000565646 PPRC1Q5VV67 1664 aaKnown RBP20.24■□□□□ 0.83
CFDP1-205ENST00000565646 ATP10BO94823 1461 aa20.24■□□□□ 0.83
CFDP1-205ENST00000565646 GLI2P10070 1586 aa20.22■□□□□ 0.83
CFDP1-205ENST00000565646 EPRSP07814 1512 aaKnown RBP20.21■□□□□ 0.83
CFDP1-205ENST00000565646 CDK13Q14004 1512 aaKnown RBP20.21■□□□□ 0.83
CFDP1-205ENST00000565646 ARID3CA6NKF2 412 aa20.19■□□□□ 0.82
CFDP1-205ENST00000565646 ATP1B4Q9UN42 357 aaPredicted RBP20.19■□□□□ 0.82
CFDP1-205ENST00000565646 CCDC18Q5T9S5 1454 aa20.15■□□□□ 0.82
CFDP1-205ENST00000565646 CFAP43Q8NDM7 1665 aa20.13■□□□□ 0.81
CFDP1-205ENST00000565646 MAP3K4Q9Y6R4 1608 aa20.13■□□□□ 0.81
CFDP1-205ENST00000565646 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
CFDP1-205ENST00000565646 ADGRL1O94910 1474 aa20.11■□□□□ 0.81
CFDP1-205ENST00000565646 MAP3K1Q13233 1512 aa20.1■□□□□ 0.81
CFDP1-205ENST00000565646 COL17A1Q9UMD9 1497 aaPredicted RBP20.1■□□□□ 0.81
CFDP1-205ENST00000565646 MAGI3Q5TCQ9 1506 aa20.09■□□□□ 0.81
CFDP1-205ENST00000565646 TEX14Q8IWB6 1497 aa20.08■□□□□ 0.81
CFDP1-205ENST00000565646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
CFDP1-205ENST00000565646 HNRNPUL2Q1KMD3 747 aaKnown RBP20.07■□□□□ 0.8
CFDP1-205ENST00000565646 WDR7Q9Y4E6 1490 aa20.06■□□□□ 0.8
CFDP1-205ENST00000565646 ILDR1Q86SU0 546 aaPredicted RBP20.04■□□□□ 0.8
CFDP1-205ENST00000565646 PLEKHD1A6NEE1 506 aa20.02■□□□□ 0.8
CFDP1-205ENST00000565646 TROQ12816 1431 aaPredicted RBP20.02■□□□□ 0.79
CFDP1-205ENST00000565646 KANK4Q5T7N3 995 aaPredicted RBP20.01■□□□□ 0.79
CFDP1-205ENST00000565646 LRRC9Q6ZRR7 1453 aa20■□□□□ 0.79
CFDP1-205ENST00000565646 CDK11AQ9UQ88 783 aaPredicted RBP20■□□□□ 0.79
CFDP1-205ENST00000565646 KIF14Q15058 1648 aa19.99■□□□□ 0.79
CFDP1-205ENST00000565646 EHBP1L1Q8N3D4 1523 aa19.98■□□□□ 0.79
CFDP1-205ENST00000565646 APLP2Q06481 763 aa19.98■□□□□ 0.79
CFDP1-205ENST00000565646 KCNH8Q96L42 1107 aa19.98■□□□□ 0.79
CFDP1-205ENST00000565646 MTUS2Q5JR59 1369 aa19.97■□□□□ 0.79
CFDP1-205ENST00000565646 CD109Q6YHK3 1445 aa19.94■□□□□ 0.78
CFDP1-205ENST00000565646 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.93■□□□□ 0.78
CFDP1-205ENST00000565646 HECW2Q9P2P5 1572 aa19.93■□□□□ 0.78
CFDP1-205ENST00000565646 ABCA9Q8IUA7 1624 aa19.93■□□□□ 0.78
CFDP1-205ENST00000565646 TTC37Q6PGP7 1564 aa19.92■□□□□ 0.78
CFDP1-205ENST00000565646 SUPT6HQ7KZ85 1726 aaKnown RBP19.91■□□□□ 0.78
CFDP1-205ENST00000565646 NCOA2Q15596 1464 aa19.87■□□□□ 0.77
CFDP1-205ENST00000565646 PPARGC1BQ86YN6 1023 aaKnown RBP19.87■□□□□ 0.77
CFDP1-205ENST00000565646 CDC42BPAQ5VT25 1732 aa19.86■□□□□ 0.77
CFDP1-205ENST00000565646 MYO5CQ9NQX4 1742 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms