RNA–Protein interactions for RNA: ENST00000565299.5

HACD3-206, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 5 BASIC

Gene HACD3, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-206ENST00000565299 KIAA0586Q9BVV6 1533 aa26.32■■□□□ 1.8
HACD3-206ENST00000565299 UBTFP17480 764 aaKnown RBP26.29■■□□□ 1.8
HACD3-206ENST00000565299 RIMBP3CA6NJZ7 1639 aa26.27■■□□□ 1.8
HACD3-206ENST00000565299 RIMBP3BA6NNM3 1639 aa26.27■■□□□ 1.8
HACD3-206ENST00000565299 RIMBP3Q9UFD9 1639 aa26.27■■□□□ 1.8
HACD3-206ENST00000565299 KIF21BO75037 1637 aa26.25■■□□□ 1.79
HACD3-206ENST00000565299 ARHGEF11O15085 1522 aa26.21■■□□□ 1.79
HACD3-206ENST00000565299 GOLGA3Q08378 1498 aa26.21■■□□□ 1.79
HACD3-206ENST00000565299 PRG4Q92954 1404 aaPredicted RBP26.2■■□□□ 1.78
HACD3-206ENST00000565299 RANGAP1P46060 587 aaPredicted RBP26.17■■□□□ 1.78
HACD3-206ENST00000565299 IQGAP2Q13576 1575 aa26.16■■□□□ 1.78
HACD3-206ENST00000565299 SHROOM2Q13796 1616 aa26.13■■□□□ 1.77
HACD3-206ENST00000565299 LOC105371045A0A1W2PR82 267 aa26.11■■□□□ 1.77
HACD3-206ENST00000565299 CYB5RLQ6IPT4 315 aa26.1■■□□□ 1.77
HACD3-206ENST00000565299 ERCC6L2Q5T890 1561 aa26.09■■□□□ 1.77
HACD3-206ENST00000565299 CTTNBP2Q8WZ74 1663 aa26.08■■□□□ 1.76
HACD3-206ENST00000565299 CARMIL2Q6F5E8 1435 aa26.07■■□□□ 1.76
HACD3-206ENST00000565299 TTBK1Q5TCY1 1321 aaPredicted RBP26.06■■□□□ 1.76
HACD3-206ENST00000565299 UGGT2Q9NYU1 1516 aa26.05■■□□□ 1.76
HACD3-206ENST00000565299 P3H3Q8IVL6 736 aa26.03■■□□□ 1.76
HACD3-206ENST00000565299 ARAP1Q96P48 1450 aa26■■□□□ 1.75
HACD3-206ENST00000565299 DISP1Q96F81 1524 aa26■■□□□ 1.75
HACD3-206ENST00000565299 TNIKQ9UKE5 1360 aa25.99■■□□□ 1.75
HACD3-206ENST00000565299 PTPRGP23470 1445 aa25.95■■□□□ 1.74
HACD3-206ENST00000565299 KIAA0556O60303 1618 aa25.9■■□□□ 1.74
HACD3-206ENST00000565299 FHOD3Q2V2M9 1422 aa25.82■■□□□ 1.72
HACD3-206ENST00000565299 SAMD9Q5K651 1589 aa25.81■■□□□ 1.72
HACD3-206ENST00000565299 CLIP1P30622 1438 aa25.8■■□□□ 1.72
HACD3-206ENST00000565299 EFCAB5A4FU69 1503 aa25.8■■□□□ 1.72
HACD3-206ENST00000565299 ARHGAP35Q9NRY4 1499 aa25.79■■□□□ 1.72
HACD3-206ENST00000565299 CEP162Q5TB80 1403 aa25.75■■□□□ 1.71
HACD3-206ENST00000565299 UACAQ9BZF9 1416 aa25.75■■□□□ 1.71
HACD3-206ENST00000565299 NPM1P06748 294 aaKnown RBP eCLIP25.72■■□□□ 1.71
HACD3-206ENST00000565299 PLB1Q6P1J6 1458 aa25.7■■□□□ 1.71
HACD3-206ENST00000565299 ATP1B4Q9UN42 357 aaPredicted RBP25.66■■□□□ 1.7
HACD3-206ENST00000565299 FMN1Q68DA7 1419 aa25.64■■□□□ 1.69
HACD3-206ENST00000565299 ARID3CA6NKF2 412 aa25.64■■□□□ 1.69
HACD3-206ENST00000565299 UHRF1BP1LA0JNW5 1464 aa25.64■■□□□ 1.69
HACD3-206ENST00000565299 ADCY10Q96PN6 1610 aa25.62■■□□□ 1.69
HACD3-206ENST00000565299 ABCC2Q92887 1545 aa25.62■■□□□ 1.69
HACD3-206ENST00000565299 ABCA8O94911 1581 aa25.61■■□□□ 1.69
HACD3-206ENST00000565299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.56■■□□□ 1.68
HACD3-206ENST00000565299 HNRNPUL2Q1KMD3 747 aaKnown RBP25.56■■□□□ 1.68
HACD3-206ENST00000565299 TRHP20396 242 aaPredicted RBP25.54■■□□□ 1.68
HACD3-206ENST00000565299 RAPGEF6Q8TEU7 1601 aa25.54■■□□□ 1.68
HACD3-206ENST00000565299 KDM5BQ9UGL1 1544 aa25.52■■□□□ 1.68
HACD3-206ENST00000565299 NUP153P49790 1475 aaKnown RBP25.49■■□□□ 1.67
HACD3-206ENST00000565299 ATP10BO94823 1461 aa25.49■■□□□ 1.67
HACD3-206ENST00000565299 CASKIN1Q8WXD9 1431 aa25.47■■□□□ 1.67
HACD3-206ENST00000565299 ASXL2Q76L83 1435 aa25.43■■□□□ 1.66
HACD3-206ENST00000565299 ZCCHC11Q5TAX3 1644 aaKnown RBP25.42■■□□□ 1.66
HACD3-206ENST00000565299 VPS8Q8N3P4 1428 aa25.4■■□□□ 1.66
HACD3-206ENST00000565299 PLEKHD1A6NEE1 506 aa25.4■■□□□ 1.66
HACD3-206ENST00000565299 KCNH8Q96L42 1107 aa25.4■■□□□ 1.66
HACD3-206ENST00000565299 PCF11O94913 1555 aaKnown RBP25.39■■□□□ 1.66
HACD3-206ENST00000565299 HECW1Q76N89 1606 aa25.39■■□□□ 1.66
HACD3-206ENST00000565299 MAPKBP1O60336 1514 aa25.39■■□□□ 1.65
HACD3-206ENST00000565299 FYCO1Q9BQS8 1478 aa25.38■■□□□ 1.65
HACD3-206ENST00000565299 EPRSP07814 1512 aaKnown RBP25.38■■□□□ 1.65
HACD3-206ENST00000565299 FAM69CQ0P6D2 419 aa25.37■■□□□ 1.65
HACD3-206ENST00000565299 CDK13Q14004 1512 aaKnown RBP25.37■■□□□ 1.65
HACD3-206ENST00000565299 CDK11AQ9UQ88 783 aaPredicted RBP25.36■■□□□ 1.65
HACD3-206ENST00000565299 WDR7Q9Y4E6 1490 aa25.32■■□□□ 1.64
HACD3-206ENST00000565299 ABCC10Q5T3U5 1492 aa25.3■■□□□ 1.64
HACD3-206ENST00000565299 CCDC18Q5T9S5 1454 aa25.29■■□□□ 1.64
HACD3-206ENST00000565299 APLP2Q06481 763 aa25.27■■□□□ 1.64
HACD3-206ENST00000565299 LRRIQ1Q96JM4 1722 aa25.21■■□□□ 1.63
HACD3-206ENST00000565299 DIP2BQ9P265 1576 aa25.2■■□□□ 1.62
HACD3-206ENST00000565299 TROQ12816 1431 aaPredicted RBP25.18■■□□□ 1.62
HACD3-206ENST00000565299 MTUS2Q5JR59 1369 aa25.18■■□□□ 1.62
HACD3-206ENST00000565299 KIF13AQ9H1H9 1805 aa25.15■■□□□ 1.62
HACD3-206ENST00000565299 GLI2P10070 1586 aa25.14■■□□□ 1.61
HACD3-206ENST00000565299 KANK4Q5T7N3 995 aaPredicted RBP25.13■■□□□ 1.61
HACD3-206ENST00000565299 MAGI3Q5TCQ9 1506 aa25.12■■□□□ 1.61
HACD3-206ENST00000565299 CD109Q6YHK3 1445 aa25.12■■□□□ 1.61
HACD3-206ENST00000565299 TIAM1Q13009 1591 aa25.09■■□□□ 1.61
HACD3-206ENST00000565299 MAP3K1Q13233 1512 aa25.07■■□□□ 1.6
HACD3-206ENST00000565299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.05■■□□□ 1.66e-6■■■■□ 21.5
HACD3-206ENST00000565299 LRRC9Q6ZRR7 1453 aa25.04■■□□□ 1.6
HACD3-206ENST00000565299 KIF14Q15058 1648 aa25.02■■□□□ 1.6
HACD3-206ENST00000565299 ABCA9Q8IUA7 1624 aa25.02■■□□□ 1.6
HACD3-206ENST00000565299 CFAP43Q8NDM7 1665 aa25.02■■□□□ 1.6
HACD3-206ENST00000565299 EHBP1L1Q8N3D4 1523 aa25.01■■□□□ 1.59
HACD3-206ENST00000565299 MAP3K4Q9Y6R4 1608 aa25■■□□□ 1.59
HACD3-206ENST00000565299 PPARGC1BQ86YN6 1023 aaKnown RBP25■■□□□ 1.59
HACD3-206ENST00000565299 TSPOAP1O95153 1857 aa24.98■■□□□ 1.59
HACD3-206ENST00000565299 TTC37Q6PGP7 1564 aa24.97■■□□□ 1.59
HACD3-206ENST00000565299 CCNB3Q8WWL7 1395 aa24.97■■□□□ 1.59
HACD3-206ENST00000565299 PLCH2O75038 1416 aa24.96■■□□□ 1.59
HACD3-206ENST00000565299 TEX14Q8IWB6 1497 aa24.95■■□□□ 1.58
HACD3-206ENST00000565299 EFCAB2Q5VUJ9 269 aa24.95■■□□□ 1.58
HACD3-206ENST00000565299 NCOA2Q15596 1464 aa24.93■■□□□ 1.58
HACD3-206ENST00000565299 CFDP1Q9UEE9 299 aaPredicted RBP24.91■■□□□ 1.58
HACD3-206ENST00000565299 ZNF777Q9ULD5 760 aaPredicted RBP24.9■■□□□ 1.58
HACD3-206ENST00000565299 GPATCH8Q9UKJ3 1502 aaKnown RBP24.89■■□□□ 1.57
HACD3-206ENST00000565299 PPRC1Q5VV67 1664 aaKnown RBP24.88■■□□□ 1.57
HACD3-206ENST00000565299 FANCAO15360 1455 aa24.88■■□□□ 1.57
HACD3-206ENST00000565299 SUPT6HQ7KZ85 1726 aaKnown RBP24.87■■□□□ 1.57
HACD3-206ENST00000565299 ARHGAP5Q13017 1502 aa24.86■■□□□ 1.57
HACD3-206ENST00000565299 PHLDB1Q86UU1 1377 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms