RNA–Protein interactions for RNA: ENST00000565184.5

PKM-216, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 2,503 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-216ENST00000565184 AQRO60306 1485 aaKnown RBP eCLIP25.61■■□□□ 1.699e-8■■■■■ 27.1
PKM-216ENST00000565184 HNRNPUL2Q1KMD3 747 aaKnown RBP25.61■■□□□ 1.69
PKM-216ENST00000565184 EFCAB5A4FU69 1503 aa25.59■■□□□ 1.69
PKM-216ENST00000565184 FHAD1B1AJZ9 1412 aa25.57■■□□□ 1.68
PKM-216ENST00000565184 FHOD3Q2V2M9 1422 aa25.57■■□□□ 1.68
PKM-216ENST00000565184 PBRM1Q86U86 1689 aa25.56■■□□□ 1.68
PKM-216ENST00000565184 IFT140Q96RY7 1462 aa25.56■■□□□ 1.68
PKM-216ENST00000565184 MAP3K1Q13233 1512 aa25.55■■□□□ 1.68
PKM-216ENST00000565184 ERCC6Q03468 1493 aa25.54■■□□□ 1.68
PKM-216ENST00000565184 TIAM1Q13009 1591 aa25.53■■□□□ 1.68
PKM-216ENST00000565184 ZNF608Q9ULD9 1512 aaPredicted RBP25.51■■□□□ 1.67
PKM-216ENST00000565184 PCF11O94913 1555 aaKnown RBP25.5■■□□□ 1.67
PKM-216ENST00000565184 GRIN2BQ13224 1484 aa25.5■■□□□ 1.67
PKM-216ENST00000565184 ADAMTS12P58397 1594 aa25.47■■□□□ 1.67
PKM-216ENST00000565184 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
PKM-216ENST00000565184 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.66
PKM-216ENST00000565184 SAMD9Q5K651 1589 aa25.45■■□□□ 1.66
PKM-216ENST00000565184 CASKIN1Q8WXD9 1431 aa25.44■■□□□ 1.66
PKM-216ENST00000565184 LRRC9Q6ZRR7 1453 aa25.43■■□□□ 1.66
PKM-216ENST00000565184 FYCO1Q9BQS8 1478 aa25.43■■□□□ 1.66
PKM-216ENST00000565184 ATP1B4Q9UN42 357 aaPredicted RBP25.41■■□□□ 1.66
PKM-216ENST00000565184 CFAP43Q8NDM7 1665 aa25.4■■□□□ 1.66
PKM-216ENST00000565184 FMN1Q68DA7 1419 aa25.4■■□□□ 1.66
PKM-216ENST00000565184 CCNB3Q8WWL7 1395 aa25.36■■□□□ 1.65
PKM-216ENST00000565184 SNAPC4Q5SXM2 1469 aa25.35■■□□□ 1.65
PKM-216ENST00000565184 EIF4G3O43432 1585 aaKnown RBP25.34■■□□□ 1.65
PKM-216ENST00000565184 IQGAP2Q13576 1575 aa25.3■■□□□ 1.64
PKM-216ENST00000565184 PHLDB1Q86UU1 1377 aa25.29■■□□□ 1.64
PKM-216ENST00000565184 GRIN2AQ12879 1464 aa25.21■■□□□ 1.63
PKM-216ENST00000565184 KIAA0586Q9BVV6 1533 aa25.19■■□□□ 1.62
PKM-216ENST00000565184 UGGT2Q9NYU1 1516 aa25.19■■□□□ 1.62
PKM-216ENST00000565184 MAGI1Q96QZ7 1491 aaPredicted RBP25.19■■□□□ 1.62
PKM-216ENST00000565184 LRRIQ1Q96JM4 1722 aa25.19■■□□□ 1.62
PKM-216ENST00000565184 ITGAEP38570 1179 aa25.18■■□□□ 1.62
PKM-216ENST00000565184 SYNJ2O15056 1496 aa25.13■■□□□ 1.61
PKM-216ENST00000565184 MTUS2Q5JR59 1369 aa25.13■■□□□ 1.61
PKM-216ENST00000565184 CHMP7Q8WUX9 453 aaPredicted RBP25.11■■□□□ 1.61
PKM-216ENST00000565184 DHX57Q6P158 1386 aaKnown RBP25.11■■□□□ 1.61
PKM-216ENST00000565184 FAM50AQ14320 339 aaKnown RBP25.1■■□□□ 1.61
PKM-216ENST00000565184 DISP1Q96F81 1524 aa25.08■■□□□ 1.61
PKM-216ENST00000565184 CCDC18Q5T9S5 1454 aa25.06■■□□□ 1.6
PKM-216ENST00000565184 CEP170Q5SW79 1584 aa25.06■■□□□ 1.6
PKM-216ENST00000565184 HECW1Q76N89 1606 aa25.06■■□□□ 1.6
PKM-216ENST00000565184 KIAA0556O60303 1618 aa25.05■■□□□ 1.6
PKM-216ENST00000565184 FBLN2P98095 1184 aa25.05■■□□□ 1.6
PKM-216ENST00000565184 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.03■■□□□ 1.65e-8■□□□□ 8.5
PKM-216ENST00000565184 MAGI3Q5TCQ9 1506 aa25.02■■□□□ 1.6
PKM-216ENST00000565184 EHBP1L1Q8N3D4 1523 aa25.02■■□□□ 1.6
PKM-216ENST00000565184 FGD6Q6ZV73 1430 aa25.02■■□□□ 1.6
PKM-216ENST00000565184 NCOA2Q15596 1464 aa25.02■■□□□ 1.6
PKM-216ENST00000565184 CLSPNQ9HAW4 1339 aa25.02■■□□□ 1.6
PKM-216ENST00000565184 EPRSP07814 1512 aaKnown RBP25.01■■□□□ 1.59
PKM-216ENST00000565184 RAB3GAP2Q9H2M9 1393 aa25■■□□□ 1.59
PKM-216ENST00000565184 NUP160Q12769 1436 aa24.99■■□□□ 1.59
PKM-216ENST00000565184 SUPT6HQ7KZ85 1726 aaKnown RBP24.98■■□□□ 1.59
PKM-216ENST00000565184 SETD5Q9C0A6 1442 aa24.98■■□□□ 1.59
PKM-216ENST00000565184 CDK13Q14004 1512 aaKnown RBP24.96■■□□□ 1.59
PKM-216ENST00000565184 MYOM3Q5VTT5 1437 aa24.95■■□□□ 1.58
PKM-216ENST00000565184 ARHGEF11O15085 1522 aa24.94■■□□□ 1.58
PKM-216ENST00000565184 ARID3CA6NKF2 412 aa24.92■■□□□ 1.58
PKM-216ENST00000565184 JPH4Q96JJ6 628 aa24.89■■□□□ 1.58
PKM-216ENST00000565184 NUP153P49790 1475 aaKnown RBP24.88■■□□□ 1.57
PKM-216ENST00000565184 RAPGEF6Q8TEU7 1601 aa24.87■■□□□ 1.57
PKM-216ENST00000565184 ZNF316A6NFI3 1004 aaPredicted RBP24.84■■□□□ 1.57
PKM-216ENST00000565184 PTPRKQ15262 1439 aa24.84■■□□□ 1.57
PKM-216ENST00000565184 CARMIL2Q6F5E8 1435 aa24.84■■□□□ 1.57
PKM-216ENST00000565184 PTPN23Q9H3S7 1636 aa24.82■■□□□ 1.56
PKM-216ENST00000565184 MAPKBP1O60336 1514 aa24.79■■□□□ 1.56
PKM-216ENST00000565184 PLB1Q6P1J6 1458 aa24.79■■□□□ 1.56
PKM-216ENST00000565184 TCOF1Q13428 1488 aaKnown RBP24.78■■□□□ 1.56
PKM-216ENST00000565184 DIEXFQ68CQ4 756 aaKnown RBP24.76■■□□□ 1.55
PKM-216ENST00000565184 MIA2Q96PC5 1412 aa24.73■■□□□ 1.55
PKM-216ENST00000565184 HFM1A2PYH4 1435 aa24.73■■□□□ 1.55
PKM-216ENST00000565184 CDK11AQ9UQ88 783 aaPredicted RBP24.72■■□□□ 1.55
PKM-216ENST00000565184 CHD1O14646 1710 aa24.7■■□□□ 1.54
PKM-216ENST00000565184 NAIPQ13075 1403 aa24.67■■□□□ 1.54
PKM-216ENST00000565184 PRG4Q92954 1404 aaPredicted RBP24.67■■□□□ 1.54
PKM-216ENST00000565184 TROQ12816 1431 aaPredicted RBP24.66■■□□□ 1.54
PKM-216ENST00000565184 ABCA8O94911 1581 aa24.66■■□□□ 1.54
PKM-216ENST00000565184 CHIC2Q9UKJ5 165 aa24.61■■□□□ 1.53
PKM-216ENST00000565184 SIN3AQ96ST3 1273 aa24.59■■□□□ 1.53
PKM-216ENST00000565184 RRP7BPQ9NSQ0 103 aa24.58■■□□□ 1.53
PKM-216ENST00000565184 PTPRGP23470 1445 aa24.57■■□□□ 1.52
PKM-216ENST00000565184 UACAQ9BZF9 1416 aa24.57■■□□□ 1.52
PKM-216ENST00000565184 ATP10BO94823 1461 aa24.57■■□□□ 1.52
PKM-216ENST00000565184 ZNF644Q9H582 1327 aaPredicted RBP24.56■■□□□ 1.52
PKM-216ENST00000565184 ADCY10Q96PN6 1610 aa24.55■■□□□ 1.52
PKM-216ENST00000565184 AKNAQ7Z591 1439 aa24.55■■□□□ 1.52
PKM-216ENST00000565184 SHROOM2Q13796 1616 aa24.54■■□□□ 1.52
PKM-216ENST00000565184 KIF14Q15058 1648 aa24.54■■□□□ 1.52
PKM-216ENST00000565184 NEUROD1Q13562 356 aa24.54■■□□□ 1.52
PKM-216ENST00000565184 DAPK1P53355 1430 aa24.52■■□□□ 1.52
PKM-216ENST00000565184 GCC2Q8IWJ2 1684 aa24.52■■□□□ 1.52
PKM-216ENST00000565184 GPATCH8Q9UKJ3 1502 aaKnown RBP24.52■■□□□ 1.52
PKM-216ENST00000565184 PLEKHD1A6NEE1 506 aa24.51■■□□□ 1.51
PKM-216ENST00000565184 ABCC5O15440 1437 aa24.51■■□□□ 1.51
PKM-216ENST00000565184 DNMT1P26358 1616 aaKnown RBP24.49■■□□□ 1.51
PKM-216ENST00000565184 CFDP1Q9UEE9 299 aaPredicted RBP24.49■■□□□ 1.51
PKM-216ENST00000565184 KDM6BO15054 1643 aa24.47■■□□□ 1.51
PKM-216ENST00000565184 ITSN2Q9NZM3 1697 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms