RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 KIF27Q86VH2 1401 aa15.07■□□□□ 0
CAPN3-213ENST00000565173 KIAA0586Q9BVV6 1533 aa15.02■□□□□ -0
CAPN3-213ENST00000565173 CUL7Q14999 1698 aa15□□□□□ -0.01
CAPN3-213ENST00000565173 CARMIL1Q5VZK9 1371 aa14.98□□□□□ -0.01
CAPN3-213ENST00000565173 KIF13AQ9H1H9 1805 aa14.96□□□□□ -0.01
CAPN3-213ENST00000565173 ADCY10Q96PN6 1610 aa14.95□□□□□ -0.02
CAPN3-213ENST00000565173 NPM1P06748 294 aaKnown RBP eCLIP14.93□□□□□ -0.02
CAPN3-213ENST00000565173 ABCC10Q5T3U5 1492 aa14.93□□□□□ -0.02
CAPN3-213ENST00000565173 MAPKBP1O60336 1514 aa14.92□□□□□ -0.02
CAPN3-213ENST00000565173 FAM69CQ0P6D2 419 aa14.91□□□□□ -0.02
CAPN3-213ENST00000565173 PTPRGP23470 1445 aa14.89□□□□□ -0.03
CAPN3-213ENST00000565173 DIP2BQ9P265 1576 aa14.87□□□□□ -0.03
CAPN3-213ENST00000565173 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
CAPN3-213ENST00000565173 TNIKQ9UKE5 1360 aa14.85□□□□□ -0.03
CAPN3-213ENST00000565173 IQGAP2Q13576 1575 aa14.85□□□□□ -0.03
CAPN3-213ENST00000565173 CARMIL2Q6F5E8 1435 aa14.85□□□□□ -0.03
CAPN3-213ENST00000565173 TTBK1Q5TCY1 1321 aaPredicted RBP14.83□□□□□ -0.04
CAPN3-213ENST00000565173 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
CAPN3-213ENST00000565173 DISP1Q96F81 1524 aa14.82□□□□□ -0.04
CAPN3-213ENST00000565173 ABCC2Q92887 1545 aa14.81□□□□□ -0.04
CAPN3-213ENST00000565173 UHRF1BP1LA0JNW5 1464 aa14.79□□□□□ -0.04
CAPN3-213ENST00000565173 UGGT2Q9NYU1 1516 aa14.79□□□□□ -0.04
CAPN3-213ENST00000565173 UACAQ9BZF9 1416 aa14.77□□□□□ -0.04
CAPN3-213ENST00000565173 ASXL2Q76L83 1435 aa14.75□□□□□ -0.05
CAPN3-213ENST00000565173 PLB1Q6P1J6 1458 aa14.74□□□□□ -0.05
CAPN3-213ENST00000565173 TSPOAP1O95153 1857 aa14.74□□□□□ -0.05
CAPN3-213ENST00000565173 KDM5BQ9UGL1 1544 aa14.72□□□□□ -0.05
CAPN3-213ENST00000565173 KIAA0556O60303 1618 aa14.72□□□□□ -0.05
CAPN3-213ENST00000565173 GLI2P10070 1586 aa14.72□□□□□ -0.05
CAPN3-213ENST00000565173 KDM6BO15054 1643 aa14.71□□□□□ -0.05
CAPN3-213ENST00000565173 PRXQ9BXM0 1461 aa14.7□□□□□ -0.06
CAPN3-213ENST00000565173 PPRC1Q5VV67 1664 aaKnown RBP14.68□□□□□ -0.06
CAPN3-213ENST00000565173 EPRSP07814 1512 aaKnown RBP14.67□□□□□ -0.06
CAPN3-213ENST00000565173 KDM4FA0A1W2PPD8 638 aa14.67□□□□□ -0.06
CAPN3-213ENST00000565173 ZCCHC11Q5TAX3 1644 aaKnown RBP14.66□□□□□ -0.06
CAPN3-213ENST00000565173 CTTNBP2Q8WZ74 1663 aa14.66□□□□□ -0.06
CAPN3-213ENST00000565173 COL17A1Q9UMD9 1497 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-213ENST00000565173 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
CAPN3-213ENST00000565173 MAP3K4Q9Y6R4 1608 aa14.63□□□□□ -0.07
CAPN3-213ENST00000565173 ABCA8O94911 1581 aa14.61□□□□□ -0.07
CAPN3-213ENST00000565173 WDR7Q9Y4E6 1490 aa14.6□□□□□ -0.07
CAPN3-213ENST00000565173 CSRNP3Q8WYN3 585 aa14.58□□□□□ -0.08
CAPN3-213ENST00000565173 TEX14Q8IWB6 1497 aa14.57□□□□□ -0.08
CAPN3-213ENST00000565173 P3H3Q8IVL6 736 aa14.54□□□□□ -0.08
CAPN3-213ENST00000565173 KCNH8Q96L42 1107 aa14.54□□□□□ -0.08
CAPN3-213ENST00000565173 CD109Q6YHK3 1445 aa14.53□□□□□ -0.08
CAPN3-213ENST00000565173 MAGI3Q5TCQ9 1506 aa14.52□□□□□ -0.08
CAPN3-213ENST00000565173 ATP10BO94823 1461 aa14.51□□□□□ -0.09
CAPN3-213ENST00000565173 SAMD9Q5K651 1589 aa14.5□□□□□ -0.09
CAPN3-213ENST00000565173 CFAP43Q8NDM7 1665 aa14.49□□□□□ -0.09
CAPN3-213ENST00000565173 ARID3CA6NKF2 412 aa14.48□□□□□ -0.09
CAPN3-213ENST00000565173 ADGRL1O94910 1474 aa14.48□□□□□ -0.09
CAPN3-213ENST00000565173 EEA1Q15075 1411 aa14.48□□□□□ -0.09
CAPN3-213ENST00000565173 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
CAPN3-213ENST00000565173 RAPGEF6Q8TEU7 1601 aa14.42□□□□□ -0.1
CAPN3-213ENST00000565173 ARAP3Q8WWN8 1544 aa14.41□□□□□ -0.1
CAPN3-213ENST00000565173 NUP153P49790 1475 aaKnown RBP14.41□□□□□ -0.1
CAPN3-213ENST00000565173 ABCA9Q8IUA7 1624 aa14.41□□□□□ -0.1
CAPN3-213ENST00000565173 RANGAP1P46060 587 aaPredicted RBP14.4□□□□□ -0.1
CAPN3-213ENST00000565173 FHOD3Q2V2M9 1422 aa14.4□□□□□ -0.1
CAPN3-213ENST00000565173 PHLDB1Q86UU1 1377 aa14.37□□□□□ -0.11
CAPN3-213ENST00000565173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.37□□□□□ -0.11
CAPN3-213ENST00000565173 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
CAPN3-213ENST00000565173 KIF21BO75037 1637 aa14.37□□□□□ -0.11
CAPN3-213ENST00000565173 RAPGEF3O95398 923 aa14.34□□□□□ -0.11
CAPN3-213ENST00000565173 NEO1Q92859 1461 aa14.33□□□□□ -0.12
CAPN3-213ENST00000565173 EFCAB5A4FU69 1503 aa14.32□□□□□ -0.12
CAPN3-213ENST00000565173 PLEKHD1A6NEE1 506 aa14.32□□□□□ -0.12
CAPN3-213ENST00000565173 CHIC1Q5VXU3 224 aa14.32□□□□□ -0.12
CAPN3-213ENST00000565173 FRMPD1Q5SYB0 1578 aa14.28□□□□□ -0.12
CAPN3-213ENST00000565173 HECW2Q9P2P5 1572 aa14.28□□□□□ -0.12
CAPN3-213ENST00000565173 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.27□□□□□ -0.12
CAPN3-213ENST00000565173 UBTFP17480 764 aaKnown RBP14.27□□□□□ -0.13
CAPN3-213ENST00000565173 EHMT2Q96KQ7 1210 aa14.27□□□□□ -0.13
CAPN3-213ENST00000565173 CDK13Q14004 1512 aaKnown RBP14.25□□□□□ -0.13
CAPN3-213ENST00000565173 AKNAQ7Z591 1439 aa14.24□□□□□ -0.13
CAPN3-213ENST00000565173 FANCAO15360 1455 aa14.24□□□□□ -0.13
CAPN3-213ENST00000565173 ARHGAP35Q9NRY4 1499 aa14.24□□□□□ -0.13
CAPN3-213ENST00000565173 ADAMTSL3P82987 1691 aa14.23□□□□□ -0.13
CAPN3-213ENST00000565173 TTC37Q6PGP7 1564 aa14.23□□□□□ -0.13
CAPN3-213ENST00000565173 RICTORQ6R327 1708 aa14.22□□□□□ -0.13
CAPN3-213ENST00000565173 DENND4BO75064 1496 aaPredicted RBP14.22□□□□□ -0.13
CAPN3-213ENST00000565173 PTPRMP28827 1452 aa14.21□□□□□ -0.13
CAPN3-213ENST00000565173 FMN1Q68DA7 1419 aa14.21□□□□□ -0.13
CAPN3-213ENST00000565173 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
CAPN3-213ENST00000565173 PLCH2O75038 1416 aa14.2□□□□□ -0.14
CAPN3-213ENST00000565173 CFAP74Q9C0B2 1584 aa14.19□□□□□ -0.14
CAPN3-213ENST00000565173 ATP1B4Q9UN42 357 aaPredicted RBP14.19□□□□□ -0.14
CAPN3-213ENST00000565173 BCORL1Q5H9F3 1711 aa14.18□□□□□ -0.14
CAPN3-213ENST00000565173 ARID4BQ4LE39 1312 aaPredicted RBP14.17□□□□□ -0.14
CAPN3-213ENST00000565173 ARHGEF40Q8TER5 1519 aa14.17□□□□□ -0.14
CAPN3-213ENST00000565173 ZMYM4Q5VZL5 1548 aa14.16□□□□□ -0.14
CAPN3-213ENST00000565173 HECW1Q76N89 1606 aa14.16□□□□□ -0.14
CAPN3-213ENST00000565173 YEATS2Q9ULM3 1422 aa14.15□□□□□ -0.14
CAPN3-213ENST00000565173 MADDQ8WXG6 1647 aa14.15□□□□□ -0.14
CAPN3-213ENST00000565173 SCAPERQ9BY12 1400 aa14.15□□□□□ -0.14
CAPN3-213ENST00000565173 CDK11AQ9UQ88 783 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-213ENST00000565173 MAGI2Q86UL8 1455 aa14.13□□□□□ -0.15
CAPN3-213ENST00000565173 SIGLEC1Q9BZZ2 1709 aa14.13□□□□□ -0.15
CAPN3-213ENST00000565173 KIF14Q15058 1648 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms