RNA–Protein interactions for RNA: ENST00000565018.6

TCF4-226, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-226ENST00000565018 AQRO60306 1485 aaKnown RBP eCLIP13.9□□□□□ -0.18
TCF4-226ENST00000565018 RRBP1Q9P2E9 1410 aaKnown RBP13.9□□□□□ -0.18
TCF4-226ENST00000565018 TIAM1Q13009 1591 aa13.89□□□□□ -0.19
TCF4-226ENST00000565018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
TCF4-226ENST00000565018 PBRM1Q86U86 1689 aa13.87□□□□□ -0.19
TCF4-226ENST00000565018 CCER1Q8TC90 406 aaPredicted RBP13.87□□□□□ -0.19
TCF4-226ENST00000565018 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
TCF4-226ENST00000565018 SAMD9Q5K651 1589 aa13.86□□□□□ -0.19
TCF4-226ENST00000565018 CFAP43Q8NDM7 1665 aa13.86□□□□□ -0.19
TCF4-226ENST00000565018 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
TCF4-226ENST00000565018 FYCO1Q9BQS8 1478 aa13.85□□□□□ -0.19
TCF4-226ENST00000565018 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.19
TCF4-226ENST00000565018 PCF11O94913 1555 aaKnown RBP13.83□□□□□ -0.2
TCF4-226ENST00000565018 ADAMTS12P58397 1594 aa13.83□□□□□ -0.2
TCF4-226ENST00000565018 LRRC9Q6ZRR7 1453 aa13.82□□□□□ -0.2
TCF4-226ENST00000565018 FMN1Q68DA7 1419 aa13.82□□□□□ -0.2
TCF4-226ENST00000565018 GRIN2BQ13224 1484 aa13.82□□□□□ -0.2
TCF4-226ENST00000565018 FHOD3Q2V2M9 1422 aa13.8□□□□□ -0.2
TCF4-226ENST00000565018 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
TCF4-226ENST00000565018 SNAPC4Q5SXM2 1469 aa13.78□□□□□ -0.2
TCF4-226ENST00000565018 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.2
TCF4-226ENST00000565018 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
TCF4-226ENST00000565018 IQGAP2Q13576 1575 aa13.74□□□□□ -0.21
TCF4-226ENST00000565018 ERCC6Q03468 1493 aa13.73□□□□□ -0.21
TCF4-226ENST00000565018 CLSPNQ9HAW4 1339 aa13.73□□□□□ -0.21
TCF4-226ENST00000565018 ZNF608Q9ULD9 1512 aaPredicted RBP13.73□□□□□ -0.21
TCF4-226ENST00000565018 EIF4G3O43432 1585 aaKnown RBP13.72□□□□□ -0.21
TCF4-226ENST00000565018 UGGT2Q9NYU1 1516 aa13.71□□□□□ -0.21
TCF4-226ENST00000565018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.71□□□□□ -0.21
TCF4-226ENST00000565018 P3H3Q8IVL6 736 aa13.69□□□□□ -0.22
TCF4-226ENST00000565018 MAGI1Q96QZ7 1491 aaPredicted RBP13.69□□□□□ -0.22
TCF4-226ENST00000565018 PHLDB1Q86UU1 1377 aa13.68□□□□□ -0.22
TCF4-226ENST00000565018 KIAA0586Q9BVV6 1533 aa13.68□□□□□ -0.22
TCF4-226ENST00000565018 CCDC18Q5T9S5 1454 aa13.66□□□□□ -0.22
TCF4-226ENST00000565018 LRRIQ1Q96JM4 1722 aa13.66□□□□□ -0.22
TCF4-226ENST00000565018 GRIN2AQ12879 1464 aa13.66□□□□□ -0.22
TCF4-226ENST00000565018 DHX57Q6P158 1386 aaKnown RBP13.64□□□□□ -0.23
TCF4-226ENST00000565018 EHBP1L1Q8N3D4 1523 aa13.64□□□□□ -0.23
TCF4-226ENST00000565018 HECW1Q76N89 1606 aa13.63□□□□□ -0.23
TCF4-226ENST00000565018 SYNJ2O15056 1496 aa13.62□□□□□ -0.23
TCF4-226ENST00000565018 ARHGEF11O15085 1522 aa13.61□□□□□ -0.23
TCF4-226ENST00000565018 KIAA0556O60303 1618 aa13.6□□□□□ -0.23
TCF4-226ENST00000565018 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
TCF4-226ENST00000565018 DISP1Q96F81 1524 aa13.59□□□□□ -0.23
TCF4-226ENST00000565018 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
TCF4-226ENST00000565018 FGD6Q6ZV73 1430 aa13.59□□□□□ -0.23
TCF4-226ENST00000565018 NUP160Q12769 1436 aa13.57□□□□□ -0.24
TCF4-226ENST00000565018 NCOA2Q15596 1464 aa13.57□□□□□ -0.24
TCF4-226ENST00000565018 EPRSP07814 1512 aaKnown RBP13.56□□□□□ -0.24
TCF4-226ENST00000565018 ATP1B4Q9UN42 357 aaPredicted RBP13.56□□□□□ -0.24
TCF4-226ENST00000565018 SETD5Q9C0A6 1442 aa13.56□□□□□ -0.24
TCF4-226ENST00000565018 MYOM3Q5VTT5 1437 aa13.56□□□□□ -0.24
TCF4-226ENST00000565018 CEP170Q5SW79 1584 aa13.55□□□□□ -0.24
TCF4-226ENST00000565018 MAGI3Q5TCQ9 1506 aa13.55□□□□□ -0.24
TCF4-226ENST00000565018 RAB3GAP2Q9H2M9 1393 aa13.55□□□□□ -0.24
TCF4-226ENST00000565018 TCOF1Q13428 1488 aaKnown RBP13.51□□□□□ -0.25
TCF4-226ENST00000565018 RAPGEF6Q8TEU7 1601 aa13.5□□□□□ -0.25
TCF4-226ENST00000565018 CHMP7Q8WUX9 453 aaPredicted RBP13.5□□□□□ -0.25
TCF4-226ENST00000565018 FAM50AQ14320 339 aaKnown RBP13.49□□□□□ -0.25
TCF4-226ENST00000565018 MIA2Q96PC5 1412 aa13.49□□□□□ -0.25
TCF4-226ENST00000565018 ZNF316A6NFI3 1004 aaPredicted RBP13.49□□□□□ -0.25
TCF4-226ENST00000565018 MAPKBP1O60336 1514 aa13.48□□□□□ -0.25
TCF4-226ENST00000565018 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
TCF4-226ENST00000565018 PTPN23Q9H3S7 1636 aa13.48□□□□□ -0.25
TCF4-226ENST00000565018 CDK13Q14004 1512 aaKnown RBP13.47□□□□□ -0.25
TCF4-226ENST00000565018 HFM1A2PYH4 1435 aa13.47□□□□□ -0.25
TCF4-226ENST00000565018 ITGAEP38570 1179 aa13.46□□□□□ -0.25
TCF4-226ENST00000565018 CARMIL2Q6F5E8 1435 aa13.46□□□□□ -0.25
TCF4-226ENST00000565018 AKNAQ7Z591 1439 aa13.45□□□□□ -0.26
TCF4-226ENST00000565018 DIEXFQ68CQ4 756 aaKnown RBP13.43□□□□□ -0.26
TCF4-226ENST00000565018 PTPRKQ15262 1439 aa13.43□□□□□ -0.26
TCF4-226ENST00000565018 PHF23Q9BUL5 403 aaPredicted RBP13.42□□□□□ -0.26
TCF4-226ENST00000565018 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
TCF4-226ENST00000565018 NAIPQ13075 1403 aa13.4□□□□□ -0.26
TCF4-226ENST00000565018 ADCY10Q96PN6 1610 aa13.4□□□□□ -0.26
TCF4-226ENST00000565018 TIMELESSQ9UNS1 1208 aa13.39□□□□□ -0.27
TCF4-226ENST00000565018 CDK11AQ9UQ88 783 aaPredicted RBP13.39□□□□□ -0.27
TCF4-226ENST00000565018 ABCA8O94911 1581 aa13.39□□□□□ -0.27
TCF4-226ENST00000565018 GCC2Q8IWJ2 1684 aa13.39□□□□□ -0.27
TCF4-226ENST00000565018 TROQ12816 1431 aaPredicted RBP13.39□□□□□ -0.27
TCF4-226ENST00000565018 UACAQ9BZF9 1416 aa13.39□□□□□ -0.27
TCF4-226ENST00000565018 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
TCF4-226ENST00000565018 ACIN1Q9UKV3 1341 aaKnown RBP13.35□□□□□ -0.27
TCF4-226ENST00000565018 SHROOM2Q13796 1616 aa13.35□□□□□ -0.27
TCF4-226ENST00000565018 FBLN2P98095 1184 aa13.35□□□□□ -0.27
TCF4-226ENST00000565018 ITSN2Q9NZM3 1697 aa13.34□□□□□ -0.27
TCF4-226ENST00000565018 ROCK1Q13464 1354 aa13.34□□□□□ -0.27
TCF4-226ENST00000565018 DNMT1P26358 1616 aaKnown RBP13.34□□□□□ -0.27
TCF4-226ENST00000565018 CHD1O14646 1710 aa13.33□□□□□ -0.28
TCF4-226ENST00000565018 PRG4Q92954 1404 aaPredicted RBP13.31□□□□□ -0.28
TCF4-226ENST00000565018 DAPK1P53355 1430 aa13.3□□□□□ -0.28
TCF4-226ENST00000565018 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
TCF4-226ENST00000565018 ATP10BO94823 1461 aa13.29□□□□□ -0.28
TCF4-226ENST00000565018 ABCC5O15440 1437 aa13.28□□□□□ -0.28
TCF4-226ENST00000565018 KIF14Q15058 1648 aa13.28□□□□□ -0.28
TCF4-226ENST00000565018 ABCC10Q5T3U5 1492 aa13.27□□□□□ -0.29
TCF4-226ENST00000565018 PTPRGP23470 1445 aa13.26□□□□□ -0.29
TCF4-226ENST00000565018 CAMSAP2Q08AD1 1489 aa13.25□□□□□ -0.29
TCF4-226ENST00000565018 ARID3CA6NKF2 412 aa13.25□□□□□ -0.29
TCF4-226ENST00000565018 ADGRL2O95490 1459 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms