RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 RAPGEF2Q9Y4G8 1499 aa31.27■■■□□ 2.6
PKD1-229ENST00000564890 KIAA0586Q9BVV6 1533 aa31.25■■■□□ 2.59
PKD1-229ENST00000564890 JPH4Q96JJ6 628 aa31.24■■■□□ 2.59
PKD1-229ENST00000564890 ERCC6L2Q5T890 1561 aa31.24■■■□□ 2.59
PKD1-229ENST00000564890 PRG4Q92954 1404 aaPredicted RBP31.19■■■□□ 2.58
PKD1-229ENST00000564890 EEA1Q15075 1411 aa31.15■■■□□ 2.58
PKD1-229ENST00000564890 PRXQ9BXM0 1461 aa31.15■■■□□ 2.58
PKD1-229ENST00000564890 CSRNP3Q8WYN3 585 aa31.14■■■□□ 2.58
PKD1-229ENST00000564890 IQGAP2Q13576 1575 aa31.08■■■□□ 2.57
PKD1-229ENST00000564890 FAM9AQ8IZU1 332 aaPredicted RBP31.07■■■□□ 2.56
PKD1-229ENST00000564890 CTTNBP2Q8WZ74 1663 aa30.96■■■□□ 2.55
PKD1-229ENST00000564890 CARMIL2Q6F5E8 1435 aa30.92■■■□□ 2.54
PKD1-229ENST00000564890 UGGT2Q9NYU1 1516 aa30.9■■■□□ 2.54
PKD1-229ENST00000564890 DISP1Q96F81 1524 aa30.86■■■□□ 2.53
PKD1-229ENST00000564890 TNIKQ9UKE5 1360 aa30.83■■■□□ 2.53
PKD1-229ENST00000564890 KIF21BO75037 1637 aa30.83■■■□□ 2.53
PKD1-229ENST00000564890 PTPRGP23470 1445 aa30.81■■■□□ 2.52
PKD1-229ENST00000564890 TTBK1Q5TCY1 1321 aaPredicted RBP30.79■■■□□ 2.52
PKD1-229ENST00000564890 KIAA0556O60303 1618 aa30.78■■■□□ 2.52
PKD1-229ENST00000564890 GOLGA3Q08378 1498 aa30.74■■■□□ 2.51
PKD1-229ENST00000564890 TRHP20396 242 aaPredicted RBP30.71■■■□□ 2.51
PKD1-229ENST00000564890 ADCY10Q96PN6 1610 aa30.71■■■□□ 2.51
PKD1-229ENST00000564890 EHMT2Q96KQ7 1210 aa30.69■■■□□ 2.5
PKD1-229ENST00000564890 NPM1P06748 294 aaKnown RBP eCLIP30.63■■■□□ 2.49
PKD1-229ENST00000564890 UBTFP17480 764 aaKnown RBP30.61■■■□□ 2.49
PKD1-229ENST00000564890 UACAQ9BZF9 1416 aa30.6■■■□□ 2.49
PKD1-229ENST00000564890 RANGAP1P46060 587 aaPredicted RBP30.58■■■□□ 2.49
PKD1-229ENST00000564890 P3H3Q8IVL6 736 aa30.57■■■□□ 2.48
PKD1-229ENST00000564890 UHRF1BP1LA0JNW5 1464 aa30.57■■■□□ 2.48
PKD1-229ENST00000564890 SAMD9Q5K651 1589 aa30.56■■■□□ 2.48
PKD1-229ENST00000564890 ABCC2Q92887 1545 aa30.54■■■□□ 2.48
PKD1-229ENST00000564890 MAPKBP1O60336 1514 aa30.5■■■□□ 2.47
PKD1-229ENST00000564890 PLB1Q6P1J6 1458 aa30.5■■■□□ 2.47
PKD1-229ENST00000564890 ABCA8O94911 1581 aa30.45■■■□□ 2.46
PKD1-229ENST00000564890 EFCAB5A4FU69 1503 aa30.43■■■□□ 2.46
PKD1-229ENST00000564890 FHOD3Q2V2M9 1422 aa30.42■■■□□ 2.46
PKD1-229ENST00000564890 KDM5BQ9UGL1 1544 aa30.42■■■□□ 2.46
PKD1-229ENST00000564890 ABCC10Q5T3U5 1492 aa30.38■■■□□ 2.45
PKD1-229ENST00000564890 ZCCHC11Q5TAX3 1644 aaKnown RBP30.36■■■□□ 2.45
PKD1-229ENST00000564890 ASXL2Q76L83 1435 aa30.35■■■□□ 2.45
PKD1-229ENST00000564890 KIF13AQ9H1H9 1805 aa30.35■■■□□ 2.45
PKD1-229ENST00000564890 FAM69CQ0P6D2 419 aa30.33■■■□□ 2.45
PKD1-229ENST00000564890 DIP2BQ9P265 1576 aa30.32■■■□□ 2.45
PKD1-229ENST00000564890 ARHGAP35Q9NRY4 1499 aa30.29■■■□□ 2.44
PKD1-229ENST00000564890 RAPGEF6Q8TEU7 1601 aa30.29■■■□□ 2.44
PKD1-229ENST00000564890 ARID3CA6NKF2 412 aa30.25■■■□□ 2.43
PKD1-229ENST00000564890 ATP10BO94823 1461 aa30.2■■■□□ 2.43
PKD1-229ENST00000564890 WDR7Q9Y4E6 1490 aa30.19■■■□□ 2.42
PKD1-229ENST00000564890 NUP153P49790 1475 aaKnown RBP30.18■■■□□ 2.42
PKD1-229ENST00000564890 EPRSP07814 1512 aaKnown RBP30.17■■■□□ 2.42
PKD1-229ENST00000564890 FMN1Q68DA7 1419 aa30.16■■■□□ 2.42
PKD1-229ENST00000564890 GLI2P10070 1586 aa30.15■■■□□ 2.42
PKD1-229ENST00000564890 CLIP1P30622 1438 aa30.12■■■□□ 2.41
PKD1-229ENST00000564890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.1■■■□□ 2.41
PKD1-229ENST00000564890 HNRNPUL2Q1KMD3 747 aaKnown RBP30.1■■■□□ 2.41
PKD1-229ENST00000564890 KCNH8Q96L42 1107 aa30.07■■■□□ 2.4
PKD1-229ENST00000564890 TSPOAP1O95153 1857 aa30.07■■■□□ 2.4
PKD1-229ENST00000564890 LOC105371045A0A1W2PR82 267 aa30.05■■■□□ 2.4
PKD1-229ENST00000564890 ATP1B4Q9UN42 357 aaPredicted RBP30.04■■■□□ 2.4
PKD1-229ENST00000564890 HECW1Q76N89 1606 aa30.02■■■□□ 2.4
PKD1-229ENST00000564890 MAP3K4Q9Y6R4 1608 aa30.01■■■□□ 2.39
PKD1-229ENST00000564890 CEP162Q5TB80 1403 aa29.98■■■□□ 2.39
PKD1-229ENST00000564890 CDK13Q14004 1512 aaKnown RBP29.98■■■□□ 2.39
PKD1-229ENST00000564890 PPRC1Q5VV67 1664 aaKnown RBP29.96■■■□□ 2.39
PKD1-229ENST00000564890 PLEKHD1A6NEE1 506 aa29.95■■■□□ 2.39
PKD1-229ENST00000564890 PCF11O94913 1555 aaKnown RBP29.93■■■□□ 2.38
PKD1-229ENST00000564890 CFAP43Q8NDM7 1665 aa29.92■■■□□ 2.38
PKD1-229ENST00000564890 CD109Q6YHK3 1445 aa29.92■■■□□ 2.38
PKD1-229ENST00000564890 CASKIN1Q8WXD9 1431 aa29.92■■■□□ 2.38
PKD1-229ENST00000564890 TEX14Q8IWB6 1497 aa29.88■■■□□ 2.37
PKD1-229ENST00000564890 FYCO1Q9BQS8 1478 aa29.86■■■□□ 2.37
PKD1-229ENST00000564890 ABCA9Q8IUA7 1624 aa29.85■■■□□ 2.37
PKD1-229ENST00000564890 MAGI3Q5TCQ9 1506 aa29.85■■■□□ 2.37
PKD1-229ENST00000564890 KDM6BO15054 1643 aa29.84■■■□□ 2.37
PKD1-229ENST00000564890 LRRIQ1Q96JM4 1722 aa29.84■■■□□ 2.37
PKD1-229ENST00000564890 CDK11AQ9UQ88 783 aaPredicted RBP29.82■■■□□ 2.36
PKD1-229ENST00000564890 CCDC18Q5T9S5 1454 aa29.8■■■□□ 2.36
PKD1-229ENST00000564890 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.74■■■□□ 2.35
PKD1-229ENST00000564890 TROQ12816 1431 aaPredicted RBP29.73■■■□□ 2.35
PKD1-229ENST00000564890 TTC37Q6PGP7 1564 aa29.71■■■□□ 2.35
PKD1-229ENST00000564890 COL17A1Q9UMD9 1497 aaPredicted RBP29.7■■■□□ 2.35
PKD1-229ENST00000564890 KIF14Q15058 1648 aa29.66■■■□□ 2.34
PKD1-229ENST00000564890 NEO1Q92859 1461 aa29.62■■■□□ 2.33
PKD1-229ENST00000564890 VPS8Q8N3P4 1428 aa29.62■■■□□ 2.33
PKD1-229ENST00000564890 PHLDB1Q86UU1 1377 aa29.61■■■□□ 2.33
PKD1-229ENST00000564890 ARAP3Q8WWN8 1544 aa29.58■■■□□ 2.33
PKD1-229ENST00000564890 FANCAO15360 1455 aa29.57■■■□□ 2.32
PKD1-229ENST00000564890 PLCH2O75038 1416 aa29.57■■■□□ 2.32
PKD1-229ENST00000564890 CFAP74Q9C0B2 1584 aa29.54■■■□□ 2.32
PKD1-229ENST00000564890 MYO5CQ9NQX4 1742 aa29.54■■■□□ 2.32
PKD1-229ENST00000564890 AKNAQ7Z591 1439 aa29.52■■■□□ 2.32
PKD1-229ENST00000564890 MTUS2Q5JR59 1369 aa29.52■■■□□ 2.32
PKD1-229ENST00000564890 EFCAB2Q5VUJ9 269 aa29.47■■■□□ 2.31
PKD1-229ENST00000564890 RAPGEF3O95398 923 aa29.46■■■□□ 2.31
PKD1-229ENST00000564890 ARHGAP5Q13017 1502 aa29.45■■■□□ 2.31
PKD1-229ENST00000564890 EHBP1L1Q8N3D4 1523 aa29.45■■■□□ 2.3
PKD1-229ENST00000564890 TIAM1Q13009 1591 aa29.43■■■□□ 2.3
PKD1-229ENST00000564890 DENND4BO75064 1496 aaPredicted RBP29.42■■■□□ 2.3
PKD1-229ENST00000564890 ADGRL1O94910 1474 aa29.42■■■□□ 2.3
PKD1-229ENST00000564890 PREX2Q70Z35 1606 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms