RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 AEBP2Q6ZN18 517 aaPredicted RBP24.9■■□□□ 1.58
CDR2-204ENST00000564542 CUL7Q14999 1698 aa24.9■■□□□ 1.58
CDR2-204ENST00000564542 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
CDR2-204ENST00000564542 KIAA0586Q9BVV6 1533 aa24.86■■□□□ 1.57
CDR2-204ENST00000564542 IGF1RP08069 1367 aa24.85■■□□□ 1.57
CDR2-204ENST00000564542 MAPKBP1O60336 1514 aa24.84■■□□□ 1.57
CDR2-204ENST00000564542 ADCY10Q96PN6 1610 aa24.83■■□□□ 1.56
CDR2-204ENST00000564542 ABCC10Q5T3U5 1492 aa24.81■■□□□ 1.56
CDR2-204ENST00000564542 DIP2BQ9P265 1576 aa24.76■■□□□ 1.55
CDR2-204ENST00000564542 NPM1P06748 294 aaKnown RBP eCLIP24.76■■□□□ 1.55
CDR2-204ENST00000564542 FAM69CQ0P6D2 419 aa24.72■■□□□ 1.55
CDR2-204ENST00000564542 CARMIL1Q5VZK9 1371 aa24.68■■□□□ 1.54
CDR2-204ENST00000564542 IQGAP2Q13576 1575 aa24.63■■□□□ 1.53
CDR2-204ENST00000564542 PTPRGP23470 1445 aa24.62■■□□□ 1.53
CDR2-204ENST00000564542 CARMIL2Q6F5E8 1435 aa24.61■■□□□ 1.53
CDR2-204ENST00000564542 TNIKQ9UKE5 1360 aa24.58■■□□□ 1.53
CDR2-204ENST00000564542 KDM6BO15054 1643 aa24.57■■□□□ 1.52
CDR2-204ENST00000564542 ABCC2Q92887 1545 aa24.56■■□□□ 1.52
CDR2-204ENST00000564542 TSPOAP1O95153 1857 aa24.55■■□□□ 1.52
CDR2-204ENST00000564542 UHRF1BP1LA0JNW5 1464 aa24.51■■□□□ 1.51
CDR2-204ENST00000564542 DISP1Q96F81 1524 aa24.51■■□□□ 1.51
CDR2-204ENST00000564542 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
CDR2-204ENST00000564542 PLB1Q6P1J6 1458 aa24.47■■□□□ 1.51
CDR2-204ENST00000564542 RAPGEF2Q9Y4G8 1499 aa24.47■■□□□ 1.51
CDR2-204ENST00000564542 ASXL2Q76L83 1435 aa24.47■■□□□ 1.51
CDR2-204ENST00000564542 UGGT2Q9NYU1 1516 aa24.46■■□□□ 1.51
CDR2-204ENST00000564542 GLI2P10070 1586 aa24.46■■□□□ 1.51
CDR2-204ENST00000564542 UACAQ9BZF9 1416 aa24.45■■□□□ 1.51
CDR2-204ENST00000564542 PPRC1Q5VV67 1664 aaKnown RBP24.42■■□□□ 1.5
CDR2-204ENST00000564542 KIAA0556O60303 1618 aa24.41■■□□□ 1.5
CDR2-204ENST00000564542 KDM5BQ9UGL1 1544 aa24.4■■□□□ 1.5
CDR2-204ENST00000564542 ZCCHC11Q5TAX3 1644 aaKnown RBP24.35■■□□□ 1.49
CDR2-204ENST00000564542 EPRSP07814 1512 aaKnown RBP24.34■■□□□ 1.49
CDR2-204ENST00000564542 CTTNBP2Q8WZ74 1663 aa24.34■■□□□ 1.49
CDR2-204ENST00000564542 MAP3K4Q9Y6R4 1608 aa24.33■■□□□ 1.49
CDR2-204ENST00000564542 KDM4FA0A1W2PPD8 638 aa24.33■■□□□ 1.49
CDR2-204ENST00000564542 TEX14Q8IWB6 1497 aa24.26■■□□□ 1.47
CDR2-204ENST00000564542 GOLGA3Q08378 1498 aa24.24■■□□□ 1.47
CDR2-204ENST00000564542 WDR7Q9Y4E6 1490 aa24.23■■□□□ 1.47
CDR2-204ENST00000564542 COL17A1Q9UMD9 1497 aaPredicted RBP24.21■■□□□ 1.47
CDR2-204ENST00000564542 PRXQ9BXM0 1461 aa24.19■■□□□ 1.46
CDR2-204ENST00000564542 ABCA8O94911 1581 aa24.18■■□□□ 1.46
CDR2-204ENST00000564542 ADGRL1O94910 1474 aa24.16■■□□□ 1.46
CDR2-204ENST00000564542 CFAP43Q8NDM7 1665 aa24.13■■□□□ 1.45
CDR2-204ENST00000564542 MAGI3Q5TCQ9 1506 aa24.09■■□□□ 1.45
CDR2-204ENST00000564542 CD109Q6YHK3 1445 aa24.06■■□□□ 1.44
CDR2-204ENST00000564542 KCNH8Q96L42 1107 aa24■■□□□ 1.43
CDR2-204ENST00000564542 SAMD9Q5K651 1589 aa23.98■■□□□ 1.43
CDR2-204ENST00000564542 FAM9AQ8IZU1 332 aaPredicted RBP23.95■■□□□ 1.42
CDR2-204ENST00000564542 ATP10BO94823 1461 aa23.94■■□□□ 1.42
CDR2-204ENST00000564542 ARAP3Q8WWN8 1544 aa23.91■■□□□ 1.42
CDR2-204ENST00000564542 P3H3Q8IVL6 736 aa23.91■■□□□ 1.42
CDR2-204ENST00000564542 ABCA9Q8IUA7 1624 aa23.91■■□□□ 1.42
CDR2-204ENST00000564542 CSRNP3Q8WYN3 585 aa23.9■■□□□ 1.42
CDR2-204ENST00000564542 RAPGEF6Q8TEU7 1601 aa23.9■■□□□ 1.42
CDR2-204ENST00000564542 HECW2Q9P2P5 1572 aa23.89■■□□□ 1.41
CDR2-204ENST00000564542 ARID3CA6NKF2 412 aa23.88■■□□□ 1.41
CDR2-204ENST00000564542 KIF21BO75037 1637 aa23.88■■□□□ 1.41
CDR2-204ENST00000564542 EEA1Q15075 1411 aa23.84■■□□□ 1.41
CDR2-204ENST00000564542 PHLDB1Q86UU1 1377 aa23.83■■□□□ 1.41
CDR2-204ENST00000564542 NUP153P49790 1475 aaKnown RBP23.8■■□□□ 1.4
CDR2-204ENST00000564542 NEO1Q92859 1461 aa23.79■■□□□ 1.4
CDR2-204ENST00000564542 FHOD3Q2V2M9 1422 aa23.76■■□□□ 1.39
CDR2-204ENST00000564542 ILDR1Q86SU0 546 aaPredicted RBP23.73■■□□□ 1.39
CDR2-204ENST00000564542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
CDR2-204ENST00000564542 HNRNPUL2Q1KMD3 747 aaKnown RBP23.72■■□□□ 1.39
CDR2-204ENST00000564542 FRMPD1Q5SYB0 1578 aa23.72■■□□□ 1.39
CDR2-204ENST00000564542 EFCAB5A4FU69 1503 aa23.71■■□□□ 1.39
CDR2-204ENST00000564542 ADAMTSL3P82987 1691 aa23.69■■□□□ 1.38
CDR2-204ENST00000564542 RAPGEF3O95398 923 aa23.68■■□□□ 1.38
CDR2-204ENST00000564542 RANGAP1P46060 587 aaPredicted RBP23.67■■□□□ 1.38
CDR2-204ENST00000564542 CFAP74Q9C0B2 1584 aa23.64■■□□□ 1.37
CDR2-204ENST00000564542 PTPRMP28827 1452 aa23.63■■□□□ 1.37
CDR2-204ENST00000564542 BCORL1Q5H9F3 1711 aa23.63■■□□□ 1.37
CDR2-204ENST00000564542 ARHGEF40Q8TER5 1519 aa23.63■■□□□ 1.37
CDR2-204ENST00000564542 PLEKHD1A6NEE1 506 aa23.62■■□□□ 1.37
CDR2-204ENST00000564542 RICTORQ6R327 1708 aa23.62■■□□□ 1.37
CDR2-204ENST00000564542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.61■■□□□ 1.37
CDR2-204ENST00000564542 TTC37Q6PGP7 1564 aa23.6■■□□□ 1.37
CDR2-204ENST00000564542 FANCAO15360 1455 aa23.59■■□□□ 1.37
CDR2-204ENST00000564542 DENND4BO75064 1496 aaPredicted RBP23.59■■□□□ 1.37
CDR2-204ENST00000564542 MADDQ8WXG6 1647 aa23.58■■□□□ 1.36
CDR2-204ENST00000564542 AKNAQ7Z591 1439 aa23.58■■□□□ 1.36
CDR2-204ENST00000564542 CDK13Q14004 1512 aaKnown RBP23.54■■□□□ 1.36
CDR2-204ENST00000564542 ZMYM4Q5VZL5 1548 aa23.54■■□□□ 1.36
CDR2-204ENST00000564542 ARID4BQ4LE39 1312 aaPredicted RBP23.53■■□□□ 1.36
CDR2-204ENST00000564542 PCF11O94913 1555 aaKnown RBP23.48■■□□□ 1.35
CDR2-204ENST00000564542 HECW1Q76N89 1606 aa23.48■■□□□ 1.35
CDR2-204ENST00000564542 ZFYVE16Q7Z3T8 1539 aa23.48■■□□□ 1.35
CDR2-204ENST00000564542 RIMS1Q86UR5 1692 aaKnown RBP23.48■■□□□ 1.35
CDR2-204ENST00000564542 FMN1Q68DA7 1419 aa23.47■■□□□ 1.35
CDR2-204ENST00000564542 MAGI2Q86UL8 1455 aa23.46■■□□□ 1.35
CDR2-204ENST00000564542 LMTK3Q96Q04 1460 aa23.44■■□□□ 1.34
CDR2-204ENST00000564542 PLCH2O75038 1416 aa23.44■■□□□ 1.34
CDR2-204ENST00000564542 SIGLEC1Q9BZZ2 1709 aa23.44■■□□□ 1.34
CDR2-204ENST00000564542 ARHGAP35Q9NRY4 1499 aa23.43■■□□□ 1.34
CDR2-204ENST00000564542 POGZQ7Z3K3 1410 aa23.43■■□□□ 1.34
CDR2-204ENST00000564542 YEATS2Q9ULM3 1422 aa23.43■■□□□ 1.34
CDR2-204ENST00000564542 MYO5CQ9NQX4 1742 aa23.42■■□□□ 1.34
CDR2-204ENST00000564542 UBTFP17480 764 aaKnown RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms