RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 GRIN2AQ12879 1464 aa30.56■■■□□ 2.48
SPNS1-206ENST00000564476 UBTFP17480 764 aaKnown RBP30.49■■■□□ 2.47
SPNS1-206ENST00000564476 LOC105371045A0A1W2PR82 267 aa30.48■■■□□ 2.47
SPNS1-206ENST00000564476 CLASP1Q7Z460 1538 aa30.44■■■□□ 2.46
SPNS1-206ENST00000564476 NUP160Q12769 1436 aa30.41■■■□□ 2.46
SPNS1-206ENST00000564476 TNIKQ9UKE5 1360 aa30.41■■■□□ 2.46
SPNS1-206ENST00000564476 EHMT2Q96KQ7 1210 aa30.4■■■□□ 2.46
SPNS1-206ENST00000564476 CTTNBP2Q8WZ74 1663 aa30.36■■■□□ 2.45
SPNS1-206ENST00000564476 KIAA0586Q9BVV6 1533 aa30.35■■■□□ 2.45
SPNS1-206ENST00000564476 ARAP1Q96P48 1450 aa30.33■■■□□ 2.45
SPNS1-206ENST00000564476 CEP170Q5SW79 1584 aa30.32■■■□□ 2.45
SPNS1-206ENST00000564476 CYB5RLQ6IPT4 315 aa30.24■■■□□ 2.43
SPNS1-206ENST00000564476 IQGAP2Q13576 1575 aa30.21■■■□□ 2.43
SPNS1-206ENST00000564476 JPH4Q96JJ6 628 aa30.19■■■□□ 2.42
SPNS1-206ENST00000564476 UGGT2Q9NYU1 1516 aa30.11■■■□□ 2.41
SPNS1-206ENST00000564476 CEP162Q5TB80 1403 aa30.08■■■□□ 2.41
SPNS1-206ENST00000564476 SHROOM2Q13796 1616 aa30.07■■■□□ 2.4
SPNS1-206ENST00000564476 CLIP1P30622 1438 aa30.05■■■□□ 2.4
SPNS1-206ENST00000564476 CARMIL2Q6F5E8 1435 aa30.04■■■□□ 2.4
SPNS1-206ENST00000564476 RANGAP1P46060 587 aaPredicted RBP30.03■■■□□ 2.4
SPNS1-206ENST00000564476 EFCAB5A4FU69 1503 aa30.01■■■□□ 2.4
SPNS1-206ENST00000564476 SAMD9Q5K651 1589 aa30■■■□□ 2.39
SPNS1-206ENST00000564476 PRG4Q92954 1404 aaPredicted RBP29.99■■■□□ 2.39
SPNS1-206ENST00000564476 ERCC6L2Q5T890 1561 aa29.98■■■□□ 2.39
SPNS1-206ENST00000564476 ARHGAP35Q9NRY4 1499 aa29.97■■■□□ 2.39
SPNS1-206ENST00000564476 DISP1Q96F81 1524 aa29.95■■■□□ 2.38
SPNS1-206ENST00000564476 KIAA0556O60303 1618 aa29.91■■■□□ 2.38
SPNS1-206ENST00000564476 P3H3Q8IVL6 736 aa29.88■■■□□ 2.37
SPNS1-206ENST00000564476 FHOD3Q2V2M9 1422 aa29.8■■■□□ 2.36
SPNS1-206ENST00000564476 FMN1Q68DA7 1419 aa29.79■■■□□ 2.36
SPNS1-206ENST00000564476 PTPRGP23470 1445 aa29.78■■■□□ 2.36
SPNS1-206ENST00000564476 TRHP20396 242 aaPredicted RBP29.77■■■□□ 2.36
SPNS1-206ENST00000564476 VPS8Q8N3P4 1428 aa29.71■■■□□ 2.35
SPNS1-206ENST00000564476 TTBK1Q5TCY1 1321 aaPredicted RBP29.63■■■□□ 2.33
SPNS1-206ENST00000564476 CASKIN1Q8WXD9 1431 aa29.61■■■□□ 2.33
SPNS1-206ENST00000564476 UACAQ9BZF9 1416 aa29.59■■■□□ 2.33
SPNS1-206ENST00000564476 ABCA8O94911 1581 aa29.55■■■□□ 2.32
SPNS1-206ENST00000564476 FYCO1Q9BQS8 1478 aa29.55■■■□□ 2.32
SPNS1-206ENST00000564476 RAPGEF6Q8TEU7 1601 aa29.54■■■□□ 2.32
SPNS1-206ENST00000564476 PCF11O94913 1555 aaKnown RBP29.54■■■□□ 2.32
SPNS1-206ENST00000564476 PLB1Q6P1J6 1458 aa29.53■■■□□ 2.32
SPNS1-206ENST00000564476 UHRF1BP1LA0JNW5 1464 aa29.52■■■□□ 2.32
SPNS1-206ENST00000564476 ATP1B4Q9UN42 357 aaPredicted RBP29.5■■■□□ 2.31
SPNS1-206ENST00000564476 APLP2Q06481 763 aa29.48■■■□□ 2.31
SPNS1-206ENST00000564476 HECW1Q76N89 1606 aa29.48■■■□□ 2.31
SPNS1-206ENST00000564476 ABCC2Q92887 1545 aa29.46■■■□□ 2.31
SPNS1-206ENST00000564476 ADCY10Q96PN6 1610 aa29.45■■■□□ 2.31
SPNS1-206ENST00000564476 NUP153P49790 1475 aaKnown RBP29.42■■■□□ 2.3
SPNS1-206ENST00000564476 LRRIQ1Q96JM4 1722 aa29.42■■■□□ 2.3
SPNS1-206ENST00000564476 CCDC18Q5T9S5 1454 aa29.41■■■□□ 2.3
SPNS1-206ENST00000564476 KIF13AQ9H1H9 1805 aa29.41■■■□□ 2.3
SPNS1-206ENST00000564476 MAP3K1Q13233 1512 aa29.4■■■□□ 2.3
SPNS1-206ENST00000564476 NPM1P06748 294 aaKnown RBP eCLIP29.38■■■□□ 2.29
SPNS1-206ENST00000564476 EPRSP07814 1512 aaKnown RBP29.38■■■□□ 2.29
SPNS1-206ENST00000564476 CDK11AQ9UQ88 783 aaPredicted RBP29.36■■■□□ 2.29
SPNS1-206ENST00000564476 ATP10BO94823 1461 aa29.35■■■□□ 2.29
SPNS1-206ENST00000564476 KDM5BQ9UGL1 1544 aa29.35■■■□□ 2.29
SPNS1-206ENST00000564476 MAPKBP1O60336 1514 aa29.33■■■□□ 2.29
SPNS1-206ENST00000564476 CFAP43Q8NDM7 1665 aa29.32■■■□□ 2.28
SPNS1-206ENST00000564476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.32■■■□□ 2.28
SPNS1-206ENST00000564476 HNRNPUL2Q1KMD3 747 aaKnown RBP29.32■■■□□ 2.28
SPNS1-206ENST00000564476 TIAM1Q13009 1591 aa29.31■■■□□ 2.28
SPNS1-206ENST00000564476 PLEKHD1A6NEE1 506 aa29.27■■■□□ 2.28
SPNS1-206ENST00000564476 CDK13Q14004 1512 aaKnown RBP29.26■■■□□ 2.27
SPNS1-206ENST00000564476 ARID3CA6NKF2 412 aa29.26■■■□□ 2.27
SPNS1-206ENST00000564476 ZCCHC11Q5TAX3 1644 aaKnown RBP29.24■■■□□ 2.27
SPNS1-206ENST00000564476 DIP2BQ9P265 1576 aa29.23■■■□□ 2.27
SPNS1-206ENST00000564476 ABCC10Q5T3U5 1492 aa29.23■■■□□ 2.27
SPNS1-206ENST00000564476 MTUS2Q5JR59 1369 aa29.19■■■□□ 2.26
SPNS1-206ENST00000564476 LRRC9Q6ZRR7 1453 aa29.17■■■□□ 2.26
SPNS1-206ENST00000564476 KANK4Q5T7N3 995 aaPredicted RBP29.16■■■□□ 2.26
SPNS1-206ENST00000564476 TROQ12816 1431 aaPredicted RBP29.14■■■□□ 2.26
SPNS1-206ENST00000564476 MAGI3Q5TCQ9 1506 aa29.13■■■□□ 2.25
SPNS1-206ENST00000564476 EHBP1L1Q8N3D4 1523 aa29.11■■■□□ 2.25
SPNS1-206ENST00000564476 FAM69CQ0P6D2 419 aa29.11■■■□□ 2.25
SPNS1-206ENST00000564476 ASXL2Q76L83 1435 aa29.09■■■□□ 2.25
SPNS1-206ENST00000564476 WDR7Q9Y4E6 1490 aa29.07■■■□□ 2.24
SPNS1-206ENST00000564476 SUPT6HQ7KZ85 1726 aaKnown RBP29.02■■■□□ 2.24
SPNS1-206ENST00000564476 PPARGC1BQ86YN6 1023 aaKnown RBP29.01■■■□□ 2.23
SPNS1-206ENST00000564476 TSPOAP1O95153 1857 aa29.01■■■□□ 2.23
SPNS1-206ENST00000564476 KCNH8Q96L42 1107 aa29■■■□□ 2.23
SPNS1-206ENST00000564476 KIF14Q15058 1648 aa28.95■■■□□ 2.23
SPNS1-206ENST00000564476 GLI2P10070 1586 aa28.93■■■□□ 2.22
SPNS1-206ENST00000564476 NCOA2Q15596 1464 aa28.93■■■□□ 2.22
SPNS1-206ENST00000564476 PPRC1Q5VV67 1664 aaKnown RBP28.89■■■□□ 2.22
SPNS1-206ENST00000564476 CCNB3Q8WWL7 1395 aa28.88■■■□□ 2.21
SPNS1-206ENST00000564476 KDM6BO15054 1643 aa28.87■■■□□ 2.21
SPNS1-206ENST00000564476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.86■■■□□ 2.21
SPNS1-206ENST00000564476 ABCA9Q8IUA7 1624 aa28.83■■■□□ 2.21
SPNS1-206ENST00000564476 PHLDB1Q86UU1 1377 aa28.83■■■□□ 2.21
SPNS1-206ENST00000564476 MAP3K4Q9Y6R4 1608 aa28.82■■■□□ 2.2
SPNS1-206ENST00000564476 MYOM3Q5VTT5 1437 aa28.81■■■□□ 2.2
SPNS1-206ENST00000564476 TTC37Q6PGP7 1564 aa28.8■■■□□ 2.2
SPNS1-206ENST00000564476 GPATCH8Q9UKJ3 1502 aaKnown RBP28.8■■■□□ 2.2
SPNS1-206ENST00000564476 CDC42BPAQ5VT25 1732 aa28.8■■■□□ 2.2
SPNS1-206ENST00000564476 MIA2Q96PC5 1412 aa28.79■■■□□ 2.2
SPNS1-206ENST00000564476 ITSN2Q9NZM3 1697 aa28.79■■■□□ 2.2
SPNS1-206ENST00000564476 PLCH2O75038 1416 aa28.78■■■□□ 2.2
SPNS1-206ENST00000564476 CFDP1Q9UEE9 299 aaPredicted RBP28.78■■■□□ 2.2
SPNS1-206ENST00000564476 MYO5CQ9NQX4 1742 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms