RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 PRXQ9BXM0 1461 aa28.58■■■□□ 2.17
CPNE7-207ENST00000564421 KIAA0586Q9BVV6 1533 aa28.56■■■□□ 2.16
CPNE7-207ENST00000564421 CSRNP3Q8WYN3 585 aa28.54■■■□□ 2.16
CPNE7-207ENST00000564421 CTTNBP2Q8WZ74 1663 aa28.48■■■□□ 2.15
CPNE7-207ENST00000564421 ARAP1Q96P48 1450 aa28.46■■■□□ 2.15
CPNE7-207ENST00000564421 JPH4Q96JJ6 628 aa28.46■■■□□ 2.15
CPNE7-207ENST00000564421 IQGAP2Q13576 1575 aa28.45■■■□□ 2.15
CPNE7-207ENST00000564421 ERCC6L2Q5T890 1561 aa28.44■■■□□ 2.14
CPNE7-207ENST00000564421 PRG4Q92954 1404 aaPredicted RBP28.41■■■□□ 2.14
CPNE7-207ENST00000564421 FAM9AQ8IZU1 332 aaPredicted RBP28.39■■■□□ 2.14
CPNE7-207ENST00000564421 KIF21BO75037 1637 aa28.39■■■□□ 2.13
CPNE7-207ENST00000564421 CYB5RLQ6IPT4 315 aa28.35■■■□□ 2.13
CPNE7-207ENST00000564421 UGGT2Q9NYU1 1516 aa28.3■■■□□ 2.12
CPNE7-207ENST00000564421 CARMIL2Q6F5E8 1435 aa28.24■■■□□ 2.11
CPNE7-207ENST00000564421 DISP1Q96F81 1524 aa28.2■■■□□ 2.1
CPNE7-207ENST00000564421 KIAA0556O60303 1618 aa28.18■■■□□ 2.1
CPNE7-207ENST00000564421 GOLGA3Q08378 1498 aa28.17■■■□□ 2.1
CPNE7-207ENST00000564421 TNIKQ9UKE5 1360 aa28.13■■■□□ 2.09
CPNE7-207ENST00000564421 PTPRGP23470 1445 aa28.08■■■□□ 2.09
CPNE7-207ENST00000564421 SAMD9Q5K651 1589 aa28.06■■■□□ 2.08
CPNE7-207ENST00000564421 ADCY10Q96PN6 1610 aa28.02■■■□□ 2.08
CPNE7-207ENST00000564421 UBTFP17480 764 aaKnown RBP28.01■■■□□ 2.07
CPNE7-207ENST00000564421 EHMT2Q96KQ7 1210 aa27.97■■■□□ 2.07
CPNE7-207ENST00000564421 EFCAB5A4FU69 1503 aa27.96■■■□□ 2.07
CPNE7-207ENST00000564421 UHRF1BP1LA0JNW5 1464 aa27.93■■■□□ 2.06
CPNE7-207ENST00000564421 TTBK1Q5TCY1 1321 aaPredicted RBP27.92■■■□□ 2.06
CPNE7-207ENST00000564421 UACAQ9BZF9 1416 aa27.92■■■□□ 2.06
CPNE7-207ENST00000564421 ABCC2Q92887 1545 aa27.91■■■□□ 2.06
CPNE7-207ENST00000564421 ABCA8O94911 1581 aa27.86■■■□□ 2.05
CPNE7-207ENST00000564421 RANGAP1P46060 587 aaPredicted RBP27.85■■■□□ 2.05
CPNE7-207ENST00000564421 P3H3Q8IVL6 736 aa27.85■■■□□ 2.05
CPNE7-207ENST00000564421 NPM1P06748 294 aaKnown RBP eCLIP27.84■■■□□ 2.05
CPNE7-207ENST00000564421 PLB1Q6P1J6 1458 aa27.83■■■□□ 2.04
CPNE7-207ENST00000564421 MAPKBP1O60336 1514 aa27.82■■■□□ 2.04
CPNE7-207ENST00000564421 FHOD3Q2V2M9 1422 aa27.8■■■□□ 2.04
CPNE7-207ENST00000564421 KDM5BQ9UGL1 1544 aa27.78■■■□□ 2.04
CPNE7-207ENST00000564421 ARHGAP35Q9NRY4 1499 aa27.78■■■□□ 2.04
CPNE7-207ENST00000564421 LOC105371045A0A1W2PR82 267 aa27.78■■■□□ 2.04
CPNE7-207ENST00000564421 ZCCHC11Q5TAX3 1644 aaKnown RBP27.77■■■□□ 2.04
CPNE7-207ENST00000564421 RAPGEF6Q8TEU7 1601 aa27.76■■■□□ 2.03
CPNE7-207ENST00000564421 KIF13AQ9H1H9 1805 aa27.72■■■□□ 2.03
CPNE7-207ENST00000564421 TRHP20396 242 aaPredicted RBP27.72■■■□□ 2.03
CPNE7-207ENST00000564421 FMN1Q68DA7 1419 aa27.66■■■□□ 2.02
CPNE7-207ENST00000564421 ABCC10Q5T3U5 1492 aa27.64■■■□□ 2.02
CPNE7-207ENST00000564421 CLIP1P30622 1438 aa27.64■■■□□ 2.02
CPNE7-207ENST00000564421 DIP2BQ9P265 1576 aa27.64■■■□□ 2.01
CPNE7-207ENST00000564421 ASXL2Q76L83 1435 aa27.63■■■□□ 2.01
CPNE7-207ENST00000564421 NUP153P49790 1475 aaKnown RBP27.6■■■□□ 2.01
CPNE7-207ENST00000564421 ATP10BO94823 1461 aa27.58■■■□□ 2.01
CPNE7-207ENST00000564421 CEP162Q5TB80 1403 aa27.55■■■□□ 2
CPNE7-207ENST00000564421 HECW1Q76N89 1606 aa27.55■■■□□ 2
CPNE7-207ENST00000564421 WDR7Q9Y4E6 1490 aa27.54■■■□□ 2
CPNE7-207ENST00000564421 GLI2P10070 1586 aa27.53■■■□□ 2
CPNE7-207ENST00000564421 FAM69CQ0P6D2 419 aa27.51■■□□□ 1.99
CPNE7-207ENST00000564421 EPRSP07814 1512 aaKnown RBP27.5■■□□□ 1.99
CPNE7-207ENST00000564421 ARID3CA6NKF2 412 aa27.47■■□□□ 1.99
CPNE7-207ENST00000564421 PCF11O94913 1555 aaKnown RBP27.47■■□□□ 1.99
CPNE7-207ENST00000564421 LRRIQ1Q96JM4 1722 aa27.46■■□□□ 1.99
CPNE7-207ENST00000564421 CASKIN1Q8WXD9 1431 aa27.45■■□□□ 1.98
CPNE7-207ENST00000564421 TSPOAP1O95153 1857 aa27.44■■□□□ 1.98
CPNE7-207ENST00000564421 MAP3K4Q9Y6R4 1608 aa27.42■■□□□ 1.98
CPNE7-207ENST00000564421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.42■■□□□ 1.98
CPNE7-207ENST00000564421 HNRNPUL2Q1KMD3 747 aaKnown RBP27.42■■□□□ 1.98
CPNE7-207ENST00000564421 FYCO1Q9BQS8 1478 aa27.41■■□□□ 1.98
CPNE7-207ENST00000564421 CDK13Q14004 1512 aaKnown RBP27.41■■□□□ 1.98
CPNE7-207ENST00000564421 CFAP43Q8NDM7 1665 aa27.4■■□□□ 1.98
CPNE7-207ENST00000564421 ATP1B4Q9UN42 357 aaPredicted RBP27.37■■□□□ 1.97
CPNE7-207ENST00000564421 PPRC1Q5VV67 1664 aaKnown RBP27.36■■□□□ 1.97
CPNE7-207ENST00000564421 CCDC18Q5T9S5 1454 aa27.35■■□□□ 1.97
CPNE7-207ENST00000564421 PLEKHD1A6NEE1 506 aa27.34■■□□□ 1.97
CPNE7-207ENST00000564421 KCNH8Q96L42 1107 aa27.34■■□□□ 1.97
CPNE7-207ENST00000564421 ABCA9Q8IUA7 1624 aa27.33■■□□□ 1.97
CPNE7-207ENST00000564421 CDK11AQ9UQ88 783 aaPredicted RBP27.28■■□□□ 1.96
CPNE7-207ENST00000564421 CD109Q6YHK3 1445 aa27.24■■□□□ 1.95
CPNE7-207ENST00000564421 TEX14Q8IWB6 1497 aa27.24■■□□□ 1.95
CPNE7-207ENST00000564421 VPS8Q8N3P4 1428 aa27.24■■□□□ 1.95
CPNE7-207ENST00000564421 MAGI3Q5TCQ9 1506 aa27.23■■□□□ 1.95
CPNE7-207ENST00000564421 TROQ12816 1431 aaPredicted RBP27.21■■□□□ 1.95
CPNE7-207ENST00000564421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.21■■□□□ 1.952e-8■■□□□ 11.8
CPNE7-207ENST00000564421 KIF14Q15058 1648 aa27.19■■□□□ 1.94
CPNE7-207ENST00000564421 TTC37Q6PGP7 1564 aa27.17■■□□□ 1.94
CPNE7-207ENST00000564421 KDM6BO15054 1643 aa27.15■■□□□ 1.94
CPNE7-207ENST00000564421 MYO5CQ9NQX4 1742 aa27.12■■□□□ 1.93
CPNE7-207ENST00000564421 TIAM1Q13009 1591 aa27.07■■□□□ 1.92
CPNE7-207ENST00000564421 CFAP74Q9C0B2 1584 aa27.06■■□□□ 1.92
CPNE7-207ENST00000564421 NEO1Q92859 1461 aa27.06■■□□□ 1.92
CPNE7-207ENST00000564421 PHLDB1Q86UU1 1377 aa27.05■■□□□ 1.92
CPNE7-207ENST00000564421 ARAP3Q8WWN8 1544 aa27.05■■□□□ 1.92
CPNE7-207ENST00000564421 MAP3K1Q13233 1512 aa27.04■■□□□ 1.92
CPNE7-207ENST00000564421 EHBP1L1Q8N3D4 1523 aa27.04■■□□□ 1.92
CPNE7-207ENST00000564421 PLCH2O75038 1416 aa27.02■■□□□ 1.92
CPNE7-207ENST00000564421 MTUS2Q5JR59 1369 aa27.02■■□□□ 1.92
CPNE7-207ENST00000564421 CDC42BPAQ5VT25 1732 aa27■■□□□ 1.91
CPNE7-207ENST00000564421 CDC42BPBQ9Y5S2 1711 aa27■■□□□ 1.91
CPNE7-207ENST00000564421 COL17A1Q9UMD9 1497 aaPredicted RBP27■■□□□ 1.91
CPNE7-207ENST00000564421 FANCAO15360 1455 aa26.99■■□□□ 1.91
CPNE7-207ENST00000564421 PREX2Q70Z35 1606 aa26.98■■□□□ 1.91
CPNE7-207ENST00000564421 SUPT6HQ7KZ85 1726 aaKnown RBP26.95■■□□□ 1.9
CPNE7-207ENST00000564421 AKNAQ7Z591 1439 aa26.93■■□□□ 1.9
CPNE7-207ENST00000564421 LRRC9Q6ZRR7 1453 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms