RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 CUL7Q14999 1698 aa16.39■□□□□ 0.21
UBFD1-203ENST00000564106 JPH4Q96JJ6 628 aa16.37■□□□□ 0.21
UBFD1-203ENST00000564106 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
UBFD1-203ENST00000564106 KIF13AQ9H1H9 1805 aa16.33■□□□□ 0.2
UBFD1-203ENST00000564106 KIAA0586Q9BVV6 1533 aa16.32■□□□□ 0.2
UBFD1-203ENST00000564106 ADCY10Q96PN6 1610 aa16.31■□□□□ 0.2
UBFD1-203ENST00000564106 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
UBFD1-203ENST00000564106 IQGAP2Q13576 1575 aa16.21■□□□□ 0.19
UBFD1-203ENST00000564106 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
UBFD1-203ENST00000564106 DIP2BQ9P265 1576 aa16.18■□□□□ 0.18
UBFD1-203ENST00000564106 MAPKBP1O60336 1514 aa16.18■□□□□ 0.18
UBFD1-203ENST00000564106 RAPGEF2Q9Y4G8 1499 aa16.16■□□□□ 0.18
UBFD1-203ENST00000564106 TTBK1Q5TCY1 1321 aaPredicted RBP16.16■□□□□ 0.18
UBFD1-203ENST00000564106 ABCC10Q5T3U5 1492 aa16.16■□□□□ 0.18
UBFD1-203ENST00000564106 PTPRGP23470 1445 aa16.12■□□□□ 0.17
UBFD1-203ENST00000564106 UGGT2Q9NYU1 1516 aa16.12■□□□□ 0.17
UBFD1-203ENST00000564106 KIAA0556O60303 1618 aa16.11■□□□□ 0.17
UBFD1-203ENST00000564106 CTTNBP2Q8WZ74 1663 aa16.11■□□□□ 0.17
UBFD1-203ENST00000564106 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
UBFD1-203ENST00000564106 FAM69CQ0P6D2 419 aa16.09■□□□□ 0.17
UBFD1-203ENST00000564106 ABCC2Q92887 1545 aa16.09■□□□□ 0.17
UBFD1-203ENST00000564106 TSPOAP1O95153 1857 aa16.08■□□□□ 0.17
UBFD1-203ENST00000564106 PRXQ9BXM0 1461 aa16.08■□□□□ 0.16
UBFD1-203ENST00000564106 CARMIL2Q6F5E8 1435 aa16.06■□□□□ 0.16
UBFD1-203ENST00000564106 PPRC1Q5VV67 1664 aaKnown RBP16.05■□□□□ 0.16
UBFD1-203ENST00000564106 UHRF1BP1LA0JNW5 1464 aa16.04■□□□□ 0.16
UBFD1-203ENST00000564106 UACAQ9BZF9 1416 aa16.02■□□□□ 0.16
UBFD1-203ENST00000564106 ZCCHC11Q5TAX3 1644 aaKnown RBP16.02■□□□□ 0.16
UBFD1-203ENST00000564106 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.16
UBFD1-203ENST00000564106 ASXL2Q76L83 1435 aa16.02■□□□□ 0.15
UBFD1-203ENST00000564106 PLB1Q6P1J6 1458 aa16■□□□□ 0.15
UBFD1-203ENST00000564106 KDM5BQ9UGL1 1544 aa15.99■□□□□ 0.15
UBFD1-203ENST00000564106 ABCA8O94911 1581 aa15.96■□□□□ 0.15
UBFD1-203ENST00000564106 KDM6BO15054 1643 aa15.96■□□□□ 0.15
UBFD1-203ENST00000564106 GLI2P10070 1586 aa15.96■□□□□ 0.14
UBFD1-203ENST00000564106 EPRSP07814 1512 aaKnown RBP15.94■□□□□ 0.14
UBFD1-203ENST00000564106 MAP3K4Q9Y6R4 1608 aa15.93■□□□□ 0.14
UBFD1-203ENST00000564106 COL17A1Q9UMD9 1497 aaPredicted RBP15.91■□□□□ 0.14
UBFD1-203ENST00000564106 EEA1Q15075 1411 aa15.91■□□□□ 0.14
UBFD1-203ENST00000564106 SAMD9Q5K651 1589 aa15.9■□□□□ 0.14
UBFD1-203ENST00000564106 P3H3Q8IVL6 736 aa15.88■□□□□ 0.13
UBFD1-203ENST00000564106 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
UBFD1-203ENST00000564106 GOLGA3Q08378 1498 aa15.88■□□□□ 0.13
UBFD1-203ENST00000564106 WDR7Q9Y4E6 1490 aa15.86■□□□□ 0.13
UBFD1-203ENST00000564106 FAM9AQ8IZU1 332 aaPredicted RBP15.85■□□□□ 0.13
UBFD1-203ENST00000564106 ARID3CA6NKF2 412 aa15.84■□□□□ 0.13
UBFD1-203ENST00000564106 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.12
UBFD1-203ENST00000564106 KDM4FA0A1W2PPD8 638 aa15.81■□□□□ 0.12
UBFD1-203ENST00000564106 ATP10BO94823 1461 aa15.8■□□□□ 0.12
UBFD1-203ENST00000564106 KIF21BO75037 1637 aa15.79■□□□□ 0.12
UBFD1-203ENST00000564106 FHOD3Q2V2M9 1422 aa15.79■□□□□ 0.12
UBFD1-203ENST00000564106 RANGAP1P46060 587 aaPredicted RBP15.78■□□□□ 0.12
UBFD1-203ENST00000564106 RAPGEF6Q8TEU7 1601 aa15.78■□□□□ 0.12
UBFD1-203ENST00000564106 CFAP43Q8NDM7 1665 aa15.77■□□□□ 0.12
UBFD1-203ENST00000564106 KCNH8Q96L42 1107 aa15.76■□□□□ 0.11
UBFD1-203ENST00000564106 NUP153P49790 1475 aaKnown RBP15.75■□□□□ 0.11
UBFD1-203ENST00000564106 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
UBFD1-203ENST00000564106 CD109Q6YHK3 1445 aa15.73■□□□□ 0.11
UBFD1-203ENST00000564106 MAGI3Q5TCQ9 1506 aa15.73■□□□□ 0.11
UBFD1-203ENST00000564106 TEX14Q8IWB6 1497 aa15.72■□□□□ 0.11
UBFD1-203ENST00000564106 ABCA9Q8IUA7 1624 aa15.7■□□□□ 0.1
UBFD1-203ENST00000564106 ADGRL1O94910 1474 aa15.69■□□□□ 0.1
UBFD1-203ENST00000564106 EFCAB5A4FU69 1503 aa15.65■□□□□ 0.1
UBFD1-203ENST00000564106 CDK13Q14004 1512 aaKnown RBP15.65■□□□□ 0.1
UBFD1-203ENST00000564106 FRMPD1Q5SYB0 1578 aa15.63■□□□□ 0.09
UBFD1-203ENST00000564106 ARHGAP35Q9NRY4 1499 aa15.63■□□□□ 0.09
UBFD1-203ENST00000564106 LOC105371045A0A1W2PR82 267 aa15.62■□□□□ 0.09
UBFD1-203ENST00000564106 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
UBFD1-203ENST00000564106 LRRIQ1Q96JM4 1722 aa15.61■□□□□ 0.09
UBFD1-203ENST00000564106 ARAP3Q8WWN8 1544 aa15.6■□□□□ 0.09
UBFD1-203ENST00000564106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.58■□□□□ 0.09
UBFD1-203ENST00000564106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
UBFD1-203ENST00000564106 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
UBFD1-203ENST00000564106 RAPGEF3O95398 923 aa15.55■□□□□ 0.08
UBFD1-203ENST00000564106 UBTFP17480 764 aaKnown RBP15.55■□□□□ 0.08
UBFD1-203ENST00000564106 SIGLEC1Q9BZZ2 1709 aa15.54■□□□□ 0.08
UBFD1-203ENST00000564106 RICTORQ6R327 1708 aa15.53■□□□□ 0.08
UBFD1-203ENST00000564106 KIF14Q15058 1648 aa15.53■□□□□ 0.08
UBFD1-203ENST00000564106 NEO1Q92859 1461 aa15.52■□□□□ 0.08
UBFD1-203ENST00000564106 HECW1Q76N89 1606 aa15.5■□□□□ 0.07
UBFD1-203ENST00000564106 PCF11O94913 1555 aaKnown RBP15.49■□□□□ 0.07
UBFD1-203ENST00000564106 FANCAO15360 1455 aa15.47■□□□□ 0.07
UBFD1-203ENST00000564106 PLEKHD1A6NEE1 506 aa15.47■□□□□ 0.07
UBFD1-203ENST00000564106 AKNAQ7Z591 1439 aa15.47■□□□□ 0.07
UBFD1-203ENST00000564106 HECW2Q9P2P5 1572 aa15.47■□□□□ 0.07
UBFD1-203ENST00000564106 ADAMTSL3P82987 1691 aa15.47■□□□□ 0.07
UBFD1-203ENST00000564106 ARHGEF40Q8TER5 1519 aa15.46■□□□□ 0.07
UBFD1-203ENST00000564106 FMN1Q68DA7 1419 aa15.45■□□□□ 0.06
UBFD1-203ENST00000564106 PHLDB1Q86UU1 1377 aa15.44■□□□□ 0.06
UBFD1-203ENST00000564106 YEATS2Q9ULM3 1422 aa15.43■□□□□ 0.06
UBFD1-203ENST00000564106 BCORL1Q5H9F3 1711 aa15.43■□□□□ 0.06
UBFD1-203ENST00000564106 ATP1B4Q9UN42 357 aaPredicted RBP15.43■□□□□ 0.06
UBFD1-203ENST00000564106 MYO5CQ9NQX4 1742 aa15.43■□□□□ 0.06
UBFD1-203ENST00000564106 MADDQ8WXG6 1647 aa15.43■□□□□ 0.06
UBFD1-203ENST00000564106 CEP162Q5TB80 1403 aa15.43■□□□□ 0.06
UBFD1-203ENST00000564106 CFAP74Q9C0B2 1584 aa15.42■□□□□ 0.06
UBFD1-203ENST00000564106 DENND4BO75064 1496 aaPredicted RBP15.42■□□□□ 0.06
UBFD1-203ENST00000564106 ZMYM4Q5VZL5 1548 aa15.42■□□□□ 0.06
UBFD1-203ENST00000564106 PLCH2O75038 1416 aa15.41■□□□□ 0.06
UBFD1-203ENST00000564106 TROQ12816 1431 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms