RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 KIF21BO75037 1637 aa21.08■□□□□ 0.97
SPG7-209ENST00000564047 RAPGEF2Q9Y4G8 1499 aa21.07■□□□□ 0.96
SPG7-209ENST00000564047 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
SPG7-209ENST00000564047 GOLGA3Q08378 1498 aa21.03■□□□□ 0.96
SPG7-209ENST00000564047 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
SPG7-209ENST00000564047 LOC105371045A0A1W2PR82 267 aa20.99■□□□□ 0.95
SPG7-209ENST00000564047 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
SPG7-209ENST00000564047 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
SPG7-209ENST00000564047 UBTFP17480 764 aaKnown RBP20.92■□□□□ 0.94
SPG7-209ENST00000564047 TNIKQ9UKE5 1360 aa20.89■□□□□ 0.93
SPG7-209ENST00000564047 NUP160Q12769 1436 aa20.84■□□□□ 0.93
SPG7-209ENST00000564047 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
SPG7-209ENST00000564047 KIAA0586Q9BVV6 1533 aa20.78■□□□□ 0.92
SPG7-209ENST00000564047 ERCC6L2Q5T890 1561 aa20.77■□□□□ 0.92
SPG7-209ENST00000564047 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
SPG7-209ENST00000564047 KIF13AQ9H1H9 1805 aa20.75■□□□□ 0.91
SPG7-209ENST00000564047 IQGAP2Q13576 1575 aa20.72■□□□□ 0.91
SPG7-209ENST00000564047 CEP162Q5TB80 1403 aa20.7■□□□□ 0.9
SPG7-209ENST00000564047 CLIP1P30622 1438 aa20.67■□□□□ 0.9
SPG7-209ENST00000564047 SHROOM2Q13796 1616 aa20.65■□□□□ 0.9
SPG7-209ENST00000564047 UGGT2Q9NYU1 1516 aa20.65■□□□□ 0.9
SPG7-209ENST00000564047 RANGAP1P46060 587 aaPredicted RBP20.64■□□□□ 0.89
SPG7-209ENST00000564047 JPH4Q96JJ6 628 aa20.64■□□□□ 0.89
SPG7-209ENST00000564047 EFCAB5A4FU69 1503 aa20.61■□□□□ 0.89
SPG7-209ENST00000564047 ARHGAP35Q9NRY4 1499 aa20.6■□□□□ 0.89
SPG7-209ENST00000564047 SAMD9Q5K651 1589 aa20.57■□□□□ 0.88
SPG7-209ENST00000564047 FAM69CQ0P6D2 419 aa20.56■□□□□ 0.88
SPG7-209ENST00000564047 DISP1Q96F81 1524 aa20.55■□□□□ 0.88
SPG7-209ENST00000564047 CARMIL2Q6F5E8 1435 aa20.54■□□□□ 0.88
SPG7-209ENST00000564047 PRG4Q92954 1404 aaPredicted RBP20.53■□□□□ 0.88
SPG7-209ENST00000564047 ABCC10Q5T3U5 1492 aa20.53■□□□□ 0.88
SPG7-209ENST00000564047 NPM1P06748 294 aaKnown RBP eCLIP20.52■□□□□ 0.88
SPG7-209ENST00000564047 P3H3Q8IVL6 736 aa20.51■□□□□ 0.87
SPG7-209ENST00000564047 KIAA0556O60303 1618 aa20.51■□□□□ 0.87
SPG7-209ENST00000564047 ILDR1Q86SU0 546 aaPredicted RBP20.5■□□□□ 0.87
SPG7-209ENST00000564047 FHOD3Q2V2M9 1422 aa20.49■□□□□ 0.87
SPG7-209ENST00000564047 KDM4FA0A1W2PPD8 638 aa20.48■□□□□ 0.87
SPG7-209ENST00000564047 KDM6BO15054 1643 aa20.48■□□□□ 0.87
SPG7-209ENST00000564047 MAPKBP1O60336 1514 aa20.48■□□□□ 0.87
SPG7-209ENST00000564047 DIP2BQ9P265 1576 aa20.47■□□□□ 0.87
SPG7-209ENST00000564047 VPS8Q8N3P4 1428 aa20.44■□□□□ 0.86
SPG7-209ENST00000564047 FMN1Q68DA7 1419 aa20.43■□□□□ 0.86
SPG7-209ENST00000564047 TSPOAP1O95153 1857 aa20.42■□□□□ 0.86
SPG7-209ENST00000564047 ADCY10Q96PN6 1610 aa20.38■□□□□ 0.85
SPG7-209ENST00000564047 PTPRGP23470 1445 aa20.37■□□□□ 0.85
SPG7-209ENST00000564047 CASKIN1Q8WXD9 1431 aa20.33■□□□□ 0.84
SPG7-209ENST00000564047 TTBK1Q5TCY1 1321 aaPredicted RBP20.32■□□□□ 0.84
SPG7-209ENST00000564047 FYCO1Q9BQS8 1478 aa20.3■□□□□ 0.84
SPG7-209ENST00000564047 PCF11O94913 1555 aaKnown RBP20.29■□□□□ 0.84
SPG7-209ENST00000564047 PLB1Q6P1J6 1458 aa20.27■□□□□ 0.84
SPG7-209ENST00000564047 ABCA8O94911 1581 aa20.26■□□□□ 0.83
SPG7-209ENST00000564047 UACAQ9BZF9 1416 aa20.26■□□□□ 0.83
SPG7-209ENST00000564047 RAPGEF6Q8TEU7 1601 aa20.25■□□□□ 0.83
SPG7-209ENST00000564047 ATP1B4Q9UN42 357 aaPredicted RBP20.23■□□□□ 0.83
SPG7-209ENST00000564047 HECW1Q76N89 1606 aa20.23■□□□□ 0.83
SPG7-209ENST00000564047 APLP2Q06481 763 aa20.21■□□□□ 0.83
SPG7-209ENST00000564047 UHRF1BP1LA0JNW5 1464 aa20.21■□□□□ 0.83
SPG7-209ENST00000564047 ADGRL1O94910 1474 aa20.2■□□□□ 0.82
SPG7-209ENST00000564047 NUP153P49790 1475 aaKnown RBP20.2■□□□□ 0.82
SPG7-209ENST00000564047 MAP3K1Q13233 1512 aa20.19■□□□□ 0.82
SPG7-209ENST00000564047 ABCC2Q92887 1545 aa20.19■□□□□ 0.82
SPG7-209ENST00000564047 CCDC18Q5T9S5 1454 aa20.18■□□□□ 0.82
SPG7-209ENST00000564047 EPRSP07814 1512 aaKnown RBP20.17■□□□□ 0.82
SPG7-209ENST00000564047 PPRC1Q5VV67 1664 aaKnown RBP20.13■□□□□ 0.81
SPG7-209ENST00000564047 TIAM1Q13009 1591 aa20.13■□□□□ 0.81
SPG7-209ENST00000564047 HECW2Q9P2P5 1572 aa20.13■□□□□ 0.81
SPG7-209ENST00000564047 GLI2P10070 1586 aa20.12■□□□□ 0.81
SPG7-209ENST00000564047 ATP10BO94823 1461 aa20.11■□□□□ 0.81
SPG7-209ENST00000564047 ARID3CA6NKF2 412 aa20.1■□□□□ 0.81
SPG7-209ENST00000564047 CDK13Q14004 1512 aaKnown RBP20.1■□□□□ 0.81
SPG7-209ENST00000564047 KDM5BQ9UGL1 1544 aa20.1■□□□□ 0.81
SPG7-209ENST00000564047 LRRIQ1Q96JM4 1722 aa20.1■□□□□ 0.81
SPG7-209ENST00000564047 ASXL2Q76L83 1435 aa20.1■□□□□ 0.81
SPG7-209ENST00000564047 CFAP43Q8NDM7 1665 aa20.1■□□□□ 0.81
SPG7-209ENST00000564047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.08■□□□□ 0.81
SPG7-209ENST00000564047 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.81
SPG7-209ENST00000564047 CDK11AQ9UQ88 783 aaPredicted RBP20.07■□□□□ 0.8
SPG7-209ENST00000564047 KANK4Q5T7N3 995 aaPredicted RBP20.06■□□□□ 0.8
SPG7-209ENST00000564047 LRRC9Q6ZRR7 1453 aa20.05■□□□□ 0.8
SPG7-209ENST00000564047 MTUS2Q5JR59 1369 aa20.03■□□□□ 0.8
SPG7-209ENST00000564047 PLEKHD1A6NEE1 506 aa20.02■□□□□ 0.8
SPG7-209ENST00000564047 TEX14Q8IWB6 1497 aa20.02■□□□□ 0.8
SPG7-209ENST00000564047 ZCCHC11Q5TAX3 1644 aaKnown RBP20.02■□□□□ 0.79
SPG7-209ENST00000564047 COL17A1Q9UMD9 1497 aaPredicted RBP20.01■□□□□ 0.79
SPG7-209ENST00000564047 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
SPG7-209ENST00000564047 MAGI3Q5TCQ9 1506 aa20■□□□□ 0.79
SPG7-209ENST00000564047 EHBP1L1Q8N3D4 1523 aa20■□□□□ 0.79
SPG7-209ENST00000564047 MAP3K4Q9Y6R4 1608 aa19.99■□□□□ 0.79
SPG7-209ENST00000564047 TROQ12816 1431 aaPredicted RBP19.99■□□□□ 0.79
SPG7-209ENST00000564047 WDR7Q9Y4E6 1490 aa19.92■□□□□ 0.78
SPG7-209ENST00000564047 FBXO41Q8TF61 875 aa19.91■□□□□ 0.78
SPG7-209ENST00000564047 NCOA2Q15596 1464 aa19.89■□□□□ 0.77
SPG7-209ENST00000564047 SUPT6HQ7KZ85 1726 aaKnown RBP19.89■□□□□ 0.77
SPG7-209ENST00000564047 KIF14Q15058 1648 aa19.87■□□□□ 0.77
SPG7-209ENST00000564047 KCNH8Q96L42 1107 aa19.84■□□□□ 0.77
SPG7-209ENST00000564047 PHLDB1Q86UU1 1377 aa19.83■□□□□ 0.77
SPG7-209ENST00000564047 CCNB3Q8WWL7 1395 aa19.81■□□□□ 0.76
SPG7-209ENST00000564047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.8■□□□□ 0.76
SPG7-209ENST00000564047 MYOM3Q5VTT5 1437 aa19.79■□□□□ 0.76
SPG7-209ENST00000564047 GPATCH8Q9UKJ3 1502 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms