RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 NPM1P06748 294 aaKnown RBP eCLIP30.23■■■□□ 2.43
MAP1LC3B-204ENST00000563720 FAM69CQ0P6D2 419 aa30.22■■■□□ 2.43
MAP1LC3B-204ENST00000563720 KIF27Q86VH2 1401 aa30.21■■■□□ 2.43
MAP1LC3B-204ENST00000563720 CUL7Q14999 1698 aa30.17■■■□□ 2.42
MAP1LC3B-204ENST00000563720 ABCC10Q5T3U5 1492 aa30.16■■■□□ 2.42
MAP1LC3B-204ENST00000563720 RUSC2Q8N2Y8 1516 aa30.16■■■□□ 2.42
MAP1LC3B-204ENST00000563720 IGF1RP08069 1367 aa30.15■■■□□ 2.42
MAP1LC3B-204ENST00000563720 MAPKBP1O60336 1514 aa30.09■■■□□ 2.41
MAP1LC3B-204ENST00000563720 ADCY10Q96PN6 1610 aa30.04■■■□□ 2.4
MAP1LC3B-204ENST00000563720 DIP2BQ9P265 1576 aa30.03■■■□□ 2.4
MAP1LC3B-204ENST00000563720 KIAA0586Q9BVV6 1533 aa30■■■□□ 2.39
MAP1LC3B-204ENST00000563720 CARMIL1Q5VZK9 1371 aa29.95■■■□□ 2.39
MAP1LC3B-204ENST00000563720 KDM6BO15054 1643 aa29.93■■■□□ 2.38
MAP1LC3B-204ENST00000563720 KDM4FA0A1W2PPD8 638 aa29.87■■■□□ 2.37
MAP1LC3B-204ENST00000563720 TSPOAP1O95153 1857 aa29.87■■■□□ 2.37
MAP1LC3B-204ENST00000563720 TTBK1Q5TCY1 1321 aaPredicted RBP29.86■■■□□ 2.37
MAP1LC3B-204ENST00000563720 PTPRGP23470 1445 aa29.85■■■□□ 2.37
MAP1LC3B-204ENST00000563720 CARMIL2Q6F5E8 1435 aa29.76■■■□□ 2.35
MAP1LC3B-204ENST00000563720 TNIKQ9UKE5 1360 aa29.76■■■□□ 2.35
MAP1LC3B-204ENST00000563720 IQGAP2Q13576 1575 aa29.74■■■□□ 2.35
MAP1LC3B-204ENST00000563720 RAPGEF2Q9Y4G8 1499 aa29.74■■■□□ 2.35
MAP1LC3B-204ENST00000563720 ABCC2Q92887 1545 aa29.72■■■□□ 2.35
MAP1LC3B-204ENST00000563720 ASXL2Q76L83 1435 aa29.68■■■□□ 2.34
MAP1LC3B-204ENST00000563720 PLB1Q6P1J6 1458 aa29.68■■■□□ 2.34
MAP1LC3B-204ENST00000563720 GLI2P10070 1586 aa29.61■■■□□ 2.33
MAP1LC3B-204ENST00000563720 CTTNBP2Q8WZ74 1663 aa29.61■■■□□ 2.33
MAP1LC3B-204ENST00000563720 UHRF1BP1LA0JNW5 1464 aa29.6■■■□□ 2.33
MAP1LC3B-204ENST00000563720 UACAQ9BZF9 1416 aa29.59■■■□□ 2.33
MAP1LC3B-204ENST00000563720 PPRC1Q5VV67 1664 aaKnown RBP29.56■■■□□ 2.32
MAP1LC3B-204ENST00000563720 DISP1Q96F81 1524 aa29.56■■■□□ 2.32
MAP1LC3B-204ENST00000563720 UGGT2Q9NYU1 1516 aa29.56■■■□□ 2.32
MAP1LC3B-204ENST00000563720 PRXQ9BXM0 1461 aa29.55■■■□□ 2.32
MAP1LC3B-204ENST00000563720 ADGRL1O94910 1474 aa29.51■■■□□ 2.31
MAP1LC3B-204ENST00000563720 EPRSP07814 1512 aaKnown RBP29.49■■■□□ 2.31
MAP1LC3B-204ENST00000563720 KIAA0556O60303 1618 aa29.49■■■□□ 2.31
MAP1LC3B-204ENST00000563720 ILDR1Q86SU0 546 aaPredicted RBP29.48■■■□□ 2.31
MAP1LC3B-204ENST00000563720 KDM5BQ9UGL1 1544 aa29.46■■■□□ 2.31
MAP1LC3B-204ENST00000563720 COL17A1Q9UMD9 1497 aaPredicted RBP29.45■■■□□ 2.31
MAP1LC3B-204ENST00000563720 TEX14Q8IWB6 1497 aa29.44■■■□□ 2.3
MAP1LC3B-204ENST00000563720 MAP3K4Q9Y6R4 1608 aa29.42■■■□□ 2.3
MAP1LC3B-204ENST00000563720 ZCCHC11Q5TAX3 1644 aaKnown RBP29.39■■■□□ 2.3
MAP1LC3B-204ENST00000563720 CSRNP3Q8WYN3 585 aa29.35■■■□□ 2.29
MAP1LC3B-204ENST00000563720 EEA1Q15075 1411 aa29.33■■■□□ 2.29
MAP1LC3B-204ENST00000563720 GOLGA3Q08378 1498 aa29.31■■■□□ 2.28
MAP1LC3B-204ENST00000563720 WDR7Q9Y4E6 1490 aa29.3■■■□□ 2.28
MAP1LC3B-204ENST00000563720 HECW2Q9P2P5 1572 aa29.24■■■□□ 2.27
MAP1LC3B-204ENST00000563720 KCNH8Q96L42 1107 aa29.21■■■□□ 2.27
MAP1LC3B-204ENST00000563720 CD109Q6YHK3 1445 aa29.2■■■□□ 2.27
MAP1LC3B-204ENST00000563720 ABCA8O94911 1581 aa29.19■■■□□ 2.26
MAP1LC3B-204ENST00000563720 MAGI3Q5TCQ9 1506 aa29.16■■■□□ 2.26
MAP1LC3B-204ENST00000563720 SAMD9Q5K651 1589 aa29.16■■■□□ 2.26
MAP1LC3B-204ENST00000563720 CHIC1Q5VXU3 224 aa29.15■■■□□ 2.26
MAP1LC3B-204ENST00000563720 FAM9AQ8IZU1 332 aaPredicted RBP29.15■■■□□ 2.26
MAP1LC3B-204ENST00000563720 KIF21BO75037 1637 aa29.15■■■□□ 2.26
MAP1LC3B-204ENST00000563720 CFAP43Q8NDM7 1665 aa29.13■■■□□ 2.25
MAP1LC3B-204ENST00000563720 P3H3Q8IVL6 736 aa29.05■■■□□ 2.24
MAP1LC3B-204ENST00000563720 ARID3CA6NKF2 412 aa29■■■□□ 2.23
MAP1LC3B-204ENST00000563720 RAPGEF6Q8TEU7 1601 aa28.95■■■□□ 2.23
MAP1LC3B-204ENST00000563720 ARAP3Q8WWN8 1544 aa28.94■■■□□ 2.22
MAP1LC3B-204ENST00000563720 RANGAP1P46060 587 aaPredicted RBP28.91■■■□□ 2.22
MAP1LC3B-204ENST00000563720 ATP10BO94823 1461 aa28.91■■■□□ 2.22
MAP1LC3B-204ENST00000563720 EFCAB5A4FU69 1503 aa28.9■■■□□ 2.22
MAP1LC3B-204ENST00000563720 FHOD3Q2V2M9 1422 aa28.9■■■□□ 2.22
MAP1LC3B-204ENST00000563720 PHLDB1Q86UU1 1377 aa28.87■■■□□ 2.21
MAP1LC3B-204ENST00000563720 RAPGEF3O95398 923 aa28.82■■■□□ 2.2
MAP1LC3B-204ENST00000563720 ABCA9Q8IUA7 1624 aa28.82■■■□□ 2.2
MAP1LC3B-204ENST00000563720 NUP153P49790 1475 aaKnown RBP28.81■■■□□ 2.2
MAP1LC3B-204ENST00000563720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.8■■■□□ 2.2
MAP1LC3B-204ENST00000563720 HNRNPUL2Q1KMD3 747 aaKnown RBP28.8■■■□□ 2.2
MAP1LC3B-204ENST00000563720 FBXO41Q8TF61 875 aa28.8■■■□□ 2.2
MAP1LC3B-204ENST00000563720 EHMT2Q96KQ7 1210 aa28.8■■■□□ 2.2
MAP1LC3B-204ENST00000563720 PTPRMP28827 1452 aa28.79■■■□□ 2.2
MAP1LC3B-204ENST00000563720 UBTFP17480 764 aaKnown RBP28.78■■■□□ 2.2
MAP1LC3B-204ENST00000563720 NEO1Q92859 1461 aa28.76■■■□□ 2.19
MAP1LC3B-204ENST00000563720 ADAMTSL3P82987 1691 aa28.76■■■□□ 2.19
MAP1LC3B-204ENST00000563720 ARID4BQ4LE39 1312 aaPredicted RBP28.75■■■□□ 2.19
MAP1LC3B-204ENST00000563720 ARHGAP35Q9NRY4 1499 aa28.68■■■□□ 2.18
MAP1LC3B-204ENST00000563720 BCORL1Q5H9F3 1711 aa28.66■■■□□ 2.18
MAP1LC3B-204ENST00000563720 FRMPD1Q5SYB0 1578 aa28.65■■■□□ 2.18
MAP1LC3B-204ENST00000563720 MADDQ8WXG6 1647 aa28.63■■■□□ 2.17
MAP1LC3B-204ENST00000563720 PCF11O94913 1555 aaKnown RBP28.61■■■□□ 2.17
MAP1LC3B-204ENST00000563720 PLEKHD1A6NEE1 506 aa28.6■■■□□ 2.17
MAP1LC3B-204ENST00000563720 FMN1Q68DA7 1419 aa28.59■■■□□ 2.17
MAP1LC3B-204ENST00000563720 DENND4BO75064 1496 aaPredicted RBP28.59■■■□□ 2.17
MAP1LC3B-204ENST00000563720 CDK13Q14004 1512 aaKnown RBP28.57■■■□□ 2.16
MAP1LC3B-204ENST00000563720 HECW1Q76N89 1606 aa28.57■■■□□ 2.16
MAP1LC3B-204ENST00000563720 LMTK3Q96Q04 1460 aa28.56■■■□□ 2.16
MAP1LC3B-204ENST00000563720 ARHGEF40Q8TER5 1519 aa28.54■■■□□ 2.16
MAP1LC3B-204ENST00000563720 AKNAQ7Z591 1439 aa28.54■■■□□ 2.16
MAP1LC3B-204ENST00000563720 LRRIQ1Q96JM4 1722 aa28.52■■■□□ 2.16
MAP1LC3B-204ENST00000563720 RIMS1Q86UR5 1692 aaKnown RBP28.51■■■□□ 2.16
MAP1LC3B-204ENST00000563720 PLPPR3Q6T4P5 718 aa28.51■■■□□ 2.15
MAP1LC3B-204ENST00000563720 FANCAO15360 1455 aa28.51■■■□□ 2.15
MAP1LC3B-204ENST00000563720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.5■■■□□ 2.15
MAP1LC3B-204ENST00000563720 RICTORQ6R327 1708 aa28.49■■■□□ 2.15
MAP1LC3B-204ENST00000563720 POGZQ7Z3K3 1410 aa28.48■■■□□ 2.15
MAP1LC3B-204ENST00000563720 TTC37Q6PGP7 1564 aa28.48■■■□□ 2.15
MAP1LC3B-204ENST00000563720 CFAP74Q9C0B2 1584 aa28.47■■■□□ 2.15
MAP1LC3B-204ENST00000563720 HSPA2P54652 639 aa28.46■■■□□ 2.15
MAP1LC3B-204ENST00000563720 ATP1B4Q9UN42 357 aaPredicted RBP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms