RNA–Protein interactions for RNA: ENST00000563709.1

NR2E3-201, Transcript of nuclear receptor subfamily 2 group E member 3, humanhuman

TSL 2

Gene NR2E3, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3-201ENST00000563709 ZRANB1Q9UGI0 708 aa10.27□□□□□ -0.77
NR2E3-201ENST00000563709 GALR2O43603 387 aaPredicted RBP10.24□□□□□ -0.77
NR2E3-201ENST00000563709 CC2D2AQ9P2K1 1620 aa10.22□□□□□ -0.77
NR2E3-201ENST00000563709 CECR2Q9BXF3 1484 aa10.18□□□□□ -0.78
NR2E3-201ENST00000563709 BAZ1AQ9NRL2 1556 aaPredicted RBP10.14□□□□□ -0.79
NR2E3-201ENST00000563709 ZBTB22O15209 634 aa10.13□□□□□ -0.79
NR2E3-201ENST00000563709 SMARCA4P51532 1647 aa10.11□□□□□ -0.79
NR2E3-201ENST00000563709 FAM163AQ96GL9 167 aaPredicted RBP10.11□□□□□ -0.79
NR2E3-201ENST00000563709 PELP1Q8IZL8 1130 aaKnown RBP10.1□□□□□ -0.79
NR2E3-201ENST00000563709 SMARCA2P51531 1590 aa10.09□□□□□ -0.79
NR2E3-201ENST00000563709 LCE2DQ5TA82 110 aaPredicted RBP10.08□□□□□ -0.8
NR2E3-201ENST00000563709 MAMSTRQ6ZN01 415 aa10.06□□□□□ -0.8
NR2E3-201ENST00000563709 HMGXB3Q12766 1538 aa10.06□□□□□ -0.8
NR2E3-201ENST00000563709 METRNQ9UJH8 293 aa10.05□□□□□ -0.8
NR2E3-201ENST00000563709 POTEJP0CG39 1038 aa10.04□□□□□ -0.8
NR2E3-201ENST00000563709 PHF12Q96QT6 1004 aa10.04□□□□□ -0.8
NR2E3-201ENST00000563709 ATAD2BQ9ULI0 1458 aa10.04□□□□□ -0.8
NR2E3-201ENST00000563709 PAK3O75914 559 aaPredicted RBP10.03□□□□□ -0.8
NR2E3-201ENST00000563709 NCAPD3P42695 1498 aa10.03□□□□□ -0.8
NR2E3-201ENST00000563709 PEG3Q9GZU2 1588 aa10.02□□□□□ -0.81
NR2E3-201ENST00000563709 BAZ1BQ9UIG0 1483 aaKnown RBP10.01□□□□□ -0.81
NR2E3-201ENST00000563709 CREBZFQ9NS37 354 aa10□□□□□ -0.81
NR2E3-201ENST00000563709 MROH2BQ7Z745 1585 aa10□□□□□ -0.81
NR2E3-201ENST00000563709 C7P10643 843 aa9.99□□□□□ -0.81
NR2E3-201ENST00000563709 SLC39A7Q92504 469 aa9.99□□□□□ -0.81
NR2E3-201ENST00000563709 SCUBE2Q9NQ36 999 aa9.96□□□□□ -0.82
NR2E3-201ENST00000563709 ASTLQ6HA08 431 aaPredicted RBP9.95□□□□□ -0.82
NR2E3-201ENST00000563709 CDAN1Q8IWY9 1227 aa9.94□□□□□ -0.82
NR2E3-201ENST00000563709 ATMINO43313 823 aaPredicted RBP9.93□□□□□ -0.82
NR2E3-201ENST00000563709 RSF1Q96T23 1441 aaPredicted RBP9.89□□□□□ -0.83
NR2E3-201ENST00000563709 MS4A3Q96HJ5 214 aa9.88□□□□□ -0.83
NR2E3-201ENST00000563709 WIZO95785 1651 aa9.87□□□□□ -0.83
NR2E3-201ENST00000563709 TOP2AP11388 1531 aaKnown RBP9.87□□□□□ -0.83
NR2E3-201ENST00000563709 STAG3Q9UJ98 1225 aa9.86□□□□□ -0.83
NR2E3-201ENST00000563709 NPM1P06748 294 aaKnown RBP eCLIP9.83□□□□□ -0.84
NR2E3-201ENST00000563709 ERCC6Q03468 1493 aa9.82□□□□□ -0.84
NR2E3-201ENST00000563709 LAMC3Q9Y6N6 1575 aa9.81□□□□□ -0.84
NR2E3-201ENST00000563709 ATN1P54259 1190 aaPredicted RBP9.79□□□□□ -0.84
NR2E3-201ENST00000563709 MMRN1Q13201 1228 aa9.76□□□□□ -0.85
NR2E3-201ENST00000563709 PDS5BQ9NTI5 1447 aa9.75□□□□□ -0.85
NR2E3-201ENST00000563709 CADPSQ9ULU8 1353 aa9.75□□□□□ -0.85
NR2E3-201ENST00000563709 POTEFA5A3E0 1075 aa9.74□□□□□ -0.85
NR2E3-201ENST00000563709 NESP48681 1621 aa9.74□□□□□ -0.85
NR2E3-201ENST00000563709 CUX2O14529 1486 aa9.72□□□□□ -0.85
NR2E3-201ENST00000563709 MNX1P50219 401 aaPredicted RBP9.7□□□□□ -0.86
NR2E3-201ENST00000563709 SPNS2Q8IVW8 549 aa9.7□□□□□ -0.86
NR2E3-201ENST00000563709 CFTRP13569 1480 aa9.69□□□□□ -0.86
NR2E3-201ENST00000563709 CEP164Q9UPV0 1460 aa9.68□□□□□ -0.86
NR2E3-201ENST00000563709 ST18O60284 1047 aa9.67□□□□□ -0.86
NR2E3-201ENST00000563709 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
NR2E3-201ENST00000563709 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
NR2E3-201ENST00000563709 BMP2KQ9NSY1 1161 aaPredicted RBP9.66□□□□□ -0.86
NR2E3-201ENST00000563709 FANCD2Q9BXW9 1451 aa9.66□□□□□ -0.86
NR2E3-201ENST00000563709 MRC2Q9UBG0 1479 aa9.66□□□□□ -0.86
NR2E3-201ENST00000563709 SEC24BO95487 1268 aa9.65□□□□□ -0.86
NR2E3-201ENST00000563709 TSPYL2Q9H2G4 693 aaPredicted RBP9.65□□□□□ -0.86
NR2E3-201ENST00000563709 KIF21AQ7Z4S6 1674 aa9.64□□□□□ -0.87
NR2E3-201ENST00000563709 COLQQ9Y215 455 aaPredicted RBP9.63□□□□□ -0.87
NR2E3-201ENST00000563709 PRDM2Q13029 1718 aa9.62□□□□□ -0.87
NR2E3-201ENST00000563709 SUPT5HO00267 1087 aaKnown RBP9.61□□□□□ -0.87
NR2E3-201ENST00000563709 SLAIN1Q8ND83 568 aa9.61□□□□□ -0.87
NR2E3-201ENST00000563709 WDR62O43379 1518 aa9.61□□□□□ -0.87
NR2E3-201ENST00000563709 KIF12Q96FN5 646 aa9.59□□□□□ -0.87
NR2E3-201ENST00000563709 TRPC6Q9Y210 931 aa9.59□□□□□ -0.87
NR2E3-201ENST00000563709 CCDC61Q9Y6R9 512 aa9.58□□□□□ -0.88
NR2E3-201ENST00000563709 TIE1P35590 1138 aa9.57□□□□□ -0.88
NR2E3-201ENST00000563709 ABCC8Q09428 1581 aa9.53□□□□□ -0.88
NR2E3-201ENST00000563709 URB2Q14146 1524 aaKnown RBP9.52□□□□□ -0.88
NR2E3-201ENST00000563709 DNMBPQ6XZF7 1577 aa9.51□□□□□ -0.89
NR2E3-201ENST00000563709 MAP3K13O43283 966 aa9.51□□□□□ -0.89
NR2E3-201ENST00000563709 TTLL13PA6NNM8 815 aa9.5□□□□□ -0.89
NR2E3-201ENST00000563709 TMEM121BQ9BXQ6 578 aaPredicted RBP9.5□□□□□ -0.89
NR2E3-201ENST00000563709 SPDYE4A6NLX3 237 aa9.49□□□□□ -0.89
NR2E3-201ENST00000563709 TOPBP1Q92547 1522 aa9.49□□□□□ -0.89
NR2E3-201ENST00000563709 IER5LQ5T953 404 aa9.48□□□□□ -0.89
NR2E3-201ENST00000563709 IFT140Q96RY7 1462 aa9.47□□□□□ -0.89
NR2E3-201ENST00000563709 MARVELD3Q96A59 401 aa9.46□□□□□ -0.9
NR2E3-201ENST00000563709 TRIM35Q9UPQ4 493 aa9.46□□□□□ -0.9
NR2E3-201ENST00000563709 POLA1P09884 1462 aaPredicted RBP9.41□□□□□ -0.9
NR2E3-201ENST00000563709 SNPHO15079 494 aa9.41□□□□□ -0.9
NR2E3-201ENST00000563709 WDR97A6NE52 1622 aa9.4□□□□□ -0.9
NR2E3-201ENST00000563709 CUX1P39880 1505 aa9.4□□□□□ -0.91
NR2E3-201ENST00000563709 FGD5Q6ZNL6 1462 aa9.39□□□□□ -0.91
NR2E3-201ENST00000563709 WRNQ14191 1432 aaPredicted RBP eCLIP9.39□□□□□ -0.91
NR2E3-201ENST00000563709 EIF4G3O43432 1585 aaKnown RBP9.38□□□□□ -0.91
NR2E3-201ENST00000563709 PLCG2P16885 1265 aa9.38□□□□□ -0.91
NR2E3-201ENST00000563709 TOP2BQ02880 1626 aa9.35□□□□□ -0.91
NR2E3-201ENST00000563709 TARBP1Q13395 1621 aaKnown RBP9.35□□□□□ -0.91
NR2E3-201ENST00000563709 BIVM-ERCC5R4GMW8 1640 aa9.34□□□□□ -0.91
NR2E3-201ENST00000563709 SOGA1O94964 1423 aa9.34□□□□□ -0.91
NR2E3-201ENST00000563709 ZNF608Q9ULD9 1512 aaPredicted RBP9.34□□□□□ -0.91
NR2E3-201ENST00000563709 EMP3P54852 163 aa9.33□□□□□ -0.92
NR2E3-201ENST00000563709 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
NR2E3-201ENST00000563709 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
NR2E3-201ENST00000563709 RAD54L2Q9Y4B4 1467 aa9.32□□□□□ -0.92
NR2E3-201ENST00000563709 SYNJ1O43426 1573 aa9.32□□□□□ -0.92
NR2E3-201ENST00000563709 ABCA10Q8WWZ4 1543 aa9.31□□□□□ -0.92
NR2E3-201ENST00000563709 RASEFQ8IZ41 740 aa9.31□□□□□ -0.92
NR2E3-201ENST00000563709 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.31□□□□□ -0.92
NR2E3-201ENST00000563709 PCDHB13Q9Y5F0 798 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms