RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 TIAM1Q13009 1591 aa29.46■■■□□ 2.31
CDH5-204ENST00000563425 FHAD1B1AJZ9 1412 aa29.43■■■□□ 2.3
CDH5-204ENST00000563425 MRC2Q9UBG0 1479 aa29.43■■■□□ 2.3
CDH5-204ENST00000563425 RRBP1Q9P2E9 1410 aaKnown RBP29.41■■■□□ 2.3
CDH5-204ENST00000563425 PBRM1Q86U86 1689 aa29.38■■■□□ 2.29
CDH5-204ENST00000563425 CFAP43Q8NDM7 1665 aa29.38■■■□□ 2.29
CDH5-204ENST00000563425 PCF11O94913 1555 aaKnown RBP29.38■■■□□ 2.29
CDH5-204ENST00000563425 FHOD3Q2V2M9 1422 aa29.31■■■□□ 2.28
CDH5-204ENST00000563425 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.28
CDH5-204ENST00000563425 LRRC9Q6ZRR7 1453 aa29.28■■■□□ 2.28
CDH5-204ENST00000563425 FYCO1Q9BQS8 1478 aa29.28■■■□□ 2.28
CDH5-204ENST00000563425 SAMD9Q5K651 1589 aa29.28■■■□□ 2.28
CDH5-204ENST00000563425 P3H3Q8IVL6 736 aa29.28■■■□□ 2.28
CDH5-204ENST00000563425 WDR62O43379 1518 aa29.26■■■□□ 2.27
CDH5-204ENST00000563425 CCNB3Q8WWL7 1395 aa29.25■■■□□ 2.27
CDH5-204ENST00000563425 CASKIN1Q8WXD9 1431 aa29.24■■■□□ 2.27
CDH5-204ENST00000563425 ADAMTS12P58397 1594 aa29.2■■■□□ 2.27
CDH5-204ENST00000563425 FMN1Q68DA7 1419 aa29.19■■■□□ 2.26
CDH5-204ENST00000563425 IFT140Q96RY7 1462 aa29.17■■■□□ 2.26
CDH5-204ENST00000563425 GRIN2BQ13224 1484 aa29.14■■■□□ 2.26
CDH5-204ENST00000563425 SNAPC4Q5SXM2 1469 aa29.14■■■□□ 2.26
CDH5-204ENST00000563425 LRRIQ1Q96JM4 1722 aa29.08■■■□□ 2.25
CDH5-204ENST00000563425 PHLDB1Q86UU1 1377 aa29.07■■■□□ 2.24
CDH5-204ENST00000563425 ZNF608Q9ULD9 1512 aaPredicted RBP29.07■■■□□ 2.24
CDH5-204ENST00000563425 ATP1B4Q9UN42 357 aaPredicted RBP29.06■■■□□ 2.24
CDH5-204ENST00000563425 IQGAP2Q13576 1575 aa29.04■■■□□ 2.24
CDH5-204ENST00000563425 THOC2Q8NI27 1593 aaKnown RBP29.04■■■□□ 2.24
CDH5-204ENST00000563425 ERCC6Q03468 1493 aa29.03■■■□□ 2.24
CDH5-204ENST00000563425 DHX57Q6P158 1386 aaKnown RBP29.03■■■□□ 2.24
CDH5-204ENST00000563425 CLSPNQ9HAW4 1339 aa29.02■■■□□ 2.24
CDH5-204ENST00000563425 EIF4G3O43432 1585 aaKnown RBP28.99■■■□□ 2.23
CDH5-204ENST00000563425 ITGAEP38570 1179 aa28.91■■■□□ 2.22
CDH5-204ENST00000563425 UGGT2Q9NYU1 1516 aa28.9■■■□□ 2.22
CDH5-204ENST00000563425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.88■■■□□ 2.21
CDH5-204ENST00000563425 MTUS2Q5JR59 1369 aa28.85■■■□□ 2.21
CDH5-204ENST00000563425 HECW1Q76N89 1606 aa28.85■■■□□ 2.21
CDH5-204ENST00000563425 ZNF316A6NFI3 1004 aaPredicted RBP28.84■■■□□ 2.21
CDH5-204ENST00000563425 RAB3GAP2Q9H2M9 1393 aa28.84■■■□□ 2.21
CDH5-204ENST00000563425 SUPT6HQ7KZ85 1726 aaKnown RBP28.83■■■□□ 2.21
CDH5-204ENST00000563425 CCDC18Q5T9S5 1454 aa28.83■■■□□ 2.21
CDH5-204ENST00000563425 FAM50AQ14320 339 aaKnown RBP28.83■■■□□ 2.21
CDH5-204ENST00000563425 EHBP1L1Q8N3D4 1523 aa28.83■■■□□ 2.21
CDH5-204ENST00000563425 KIAA0586Q9BVV6 1533 aa28.82■■■□□ 2.2
CDH5-204ENST00000563425 GRIN2AQ12879 1464 aa28.82■■■□□ 2.2
CDH5-204ENST00000563425 SETD5Q9C0A6 1442 aa28.82■■■□□ 2.2
CDH5-204ENST00000563425 DIEXFQ68CQ4 756 aaKnown RBP28.81■■■□□ 2.2
CDH5-204ENST00000563425 MAGI1Q96QZ7 1491 aaPredicted RBP28.8■■■□□ 2.2
CDH5-204ENST00000563425 FGD6Q6ZV73 1430 aa28.8■■■□□ 2.2
CDH5-204ENST00000563425 NCOA2Q15596 1464 aa28.76■■■□□ 2.2
CDH5-204ENST00000563425 KIAA0556O60303 1618 aa28.75■■■□□ 2.19
CDH5-204ENST00000563425 MAGI3Q5TCQ9 1506 aa28.74■■■□□ 2.19
CDH5-204ENST00000563425 ARHGEF11O15085 1522 aa28.72■■■□□ 2.19
CDH5-204ENST00000563425 EPRSP07814 1512 aaKnown RBP28.71■■■□□ 2.19
CDH5-204ENST00000563425 DISP1Q96F81 1524 aa28.71■■■□□ 2.19
CDH5-204ENST00000563425 MYOM3Q5VTT5 1437 aa28.71■■■□□ 2.19
CDH5-204ENST00000563425 SYNJ2O15056 1496 aa28.7■■■□□ 2.19
CDH5-204ENST00000563425 MAPKBP1O60336 1514 aa28.68■■■□□ 2.18
CDH5-204ENST00000563425 CEP170Q5SW79 1584 aa28.65■■■□□ 2.18
CDH5-204ENST00000563425 PTPN23Q9H3S7 1636 aa28.62■■■□□ 2.17
CDH5-204ENST00000563425 CDK13Q14004 1512 aaKnown RBP28.62■■■□□ 2.17
CDH5-204ENST00000563425 CHMP7Q8WUX9 453 aaPredicted RBP28.59■■■□□ 2.17
CDH5-204ENST00000563425 RAPGEF6Q8TEU7 1601 aa28.58■■■□□ 2.17
CDH5-204ENST00000563425 NUP160Q12769 1436 aa28.55■■■□□ 2.16
CDH5-204ENST00000563425 PTPRKQ15262 1439 aa28.54■■■□□ 2.16
CDH5-204ENST00000563425 TCOF1Q13428 1488 aaKnown RBP28.53■■■□□ 2.16
CDH5-204ENST00000563425 NUP153P49790 1475 aaKnown RBP28.51■■■□□ 2.15
CDH5-204ENST00000563425 HFM1A2PYH4 1435 aa28.51■■■□□ 2.15
CDH5-204ENST00000563425 MIA2Q96PC5 1412 aa28.46■■■□□ 2.15
CDH5-204ENST00000563425 FBLN2P98095 1184 aa28.45■■■□□ 2.14
CDH5-204ENST00000563425 NAIPQ13075 1403 aa28.42■■■□□ 2.14
CDH5-204ENST00000563425 CARMIL2Q6F5E8 1435 aa28.41■■■□□ 2.14
CDH5-204ENST00000563425 GCC2Q8IWJ2 1684 aa28.4■■■□□ 2.14
CDH5-204ENST00000563425 ARID3CA6NKF2 412 aa28.39■■■□□ 2.14
CDH5-204ENST00000563425 JPH4Q96JJ6 628 aa28.37■■■□□ 2.13
CDH5-204ENST00000563425 UACAQ9BZF9 1416 aa28.36■■■□□ 2.13
CDH5-204ENST00000563425 PLB1Q6P1J6 1458 aa28.34■■■□□ 2.13
CDH5-204ENST00000563425 AKNAQ7Z591 1439 aa28.33■■■□□ 2.13
CDH5-204ENST00000563425 CDK11AQ9UQ88 783 aaPredicted RBP28.32■■■□□ 2.12
CDH5-204ENST00000563425 SIN3AQ96ST3 1273 aa28.3■■■□□ 2.12
CDH5-204ENST00000563425 TIMELESSQ9UNS1 1208 aa28.3■■■□□ 2.12
CDH5-204ENST00000563425 ADCY10Q96PN6 1610 aa28.3■■■□□ 2.12
CDH5-204ENST00000563425 TROQ12816 1431 aaPredicted RBP28.28■■■□□ 2.12
CDH5-204ENST00000563425 CHD1O14646 1710 aa28.28■■■□□ 2.12
CDH5-204ENST00000563425 ABCA8O94911 1581 aa28.27■■■□□ 2.12
CDH5-204ENST00000563425 DNMT1P26358 1616 aaKnown RBP28.26■■■□□ 2.11
CDH5-204ENST00000563425 ITSN2Q9NZM3 1697 aa28.25■■■□□ 2.11
CDH5-204ENST00000563425 NEUROD1Q13562 356 aa28.24■■■□□ 2.11
CDH5-204ENST00000563425 MIER1Q8N108 512 aa28.24■■■□□ 2.11
CDH5-204ENST00000563425 PRG4Q92954 1404 aaPredicted RBP28.23■■■□□ 2.11
CDH5-204ENST00000563425 KIF14Q15058 1648 aa28.2■■■□□ 2.1
CDH5-204ENST00000563425 RRP7BPQ9NSQ0 103 aa28.2■■■□□ 2.1
CDH5-204ENST00000563425 CHIC2Q9UKJ5 165 aa28.2■■■□□ 2.1
CDH5-204ENST00000563425 KDM6BO15054 1643 aa28.19■■■□□ 2.1
CDH5-204ENST00000563425 DAPK1P53355 1430 aa28.19■■■□□ 2.1
CDH5-204ENST00000563425 ROCK1Q13464 1354 aa28.15■■■□□ 2.1
CDH5-204ENST00000563425 ABCC5O15440 1437 aa28.14■■■□□ 2.09
CDH5-204ENST00000563425 ACIN1Q9UKV3 1341 aaKnown RBP28.13■■■□□ 2.09
CDH5-204ENST00000563425 CENPBP07199 599 aaPredicted RBP28.13■■■□□ 2.09
CDH5-204ENST00000563425 GPATCH8Q9UKJ3 1502 aaKnown RBP28.12■■■□□ 2.09
CDH5-204ENST00000563425 SHROOM2Q13796 1616 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms