RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 KIF27Q86VH2 1401 aa36.73■■■■□ 3.47
CHD9-208ENST00000563410 CUL7Q14999 1698 aa36.7■■■■□ 3.47
CHD9-208ENST00000563410 KIAA0586Q9BVV6 1533 aa36.6■■■■□ 3.45
CHD9-208ENST00000563410 KIF13AQ9H1H9 1805 aa36.55■■■■□ 3.44
CHD9-208ENST00000563410 CARMIL1Q5VZK9 1371 aa36.48■■■■□ 3.43
CHD9-208ENST00000563410 ADCY10Q96PN6 1610 aa36.45■■■■□ 3.42
CHD9-208ENST00000563410 MAPKBP1O60336 1514 aa36.36■■■■□ 3.41
CHD9-208ENST00000563410 ABCC10Q5T3U5 1492 aa36.31■■■■□ 3.4
CHD9-208ENST00000563410 NPM1P06748 294 aaKnown RBP eCLIP36.31■■■■□ 3.4
CHD9-208ENST00000563410 IQGAP2Q13576 1575 aa36.27■■■■□ 3.4
CHD9-208ENST00000563410 DIP2BQ9P265 1576 aa36.26■■■■□ 3.39
CHD9-208ENST00000563410 FAM69CQ0P6D2 419 aa36.23■■■■□ 3.39
CHD9-208ENST00000563410 PTPRGP23470 1445 aa36.22■■■■□ 3.39
CHD9-208ENST00000563410 CARMIL2Q6F5E8 1435 aa36.19■■■■□ 3.38
CHD9-208ENST00000563410 TNIKQ9UKE5 1360 aa36.17■■■■□ 3.38
CHD9-208ENST00000563410 RAPGEF2Q9Y4G8 1499 aa36.16■■■■□ 3.38
CHD9-208ENST00000563410 DISP1Q96F81 1524 aa36.12■■■■□ 3.37
CHD9-208ENST00000563410 TTBK1Q5TCY1 1321 aaPredicted RBP36.11■■■■□ 3.37
CHD9-208ENST00000563410 AEBP2Q6ZN18 517 aaPredicted RBP36.08■■■■□ 3.37
CHD9-208ENST00000563410 ABCC2Q92887 1545 aa36.06■■■■□ 3.36
CHD9-208ENST00000563410 UGGT2Q9NYU1 1516 aa36.05■■■■□ 3.36
CHD9-208ENST00000563410 TSPOAP1O95153 1857 aa36.04■■■■□ 3.36
CHD9-208ENST00000563410 UHRF1BP1LA0JNW5 1464 aa36■■■■□ 3.35
CHD9-208ENST00000563410 UACAQ9BZF9 1416 aa35.97■■■■□ 3.35
CHD9-208ENST00000563410 KIAA0556O60303 1618 aa35.97■■■■□ 3.35
CHD9-208ENST00000563410 CTTNBP2Q8WZ74 1663 aa35.95■■■■□ 3.35
CHD9-208ENST00000563410 ASXL2Q76L83 1435 aa35.92■■■■□ 3.34
CHD9-208ENST00000563410 KDM6BO15054 1643 aa35.9■■■■□ 3.34
CHD9-208ENST00000563410 PLB1Q6P1J6 1458 aa35.89■■■■□ 3.34
CHD9-208ENST00000563410 GLI2P10070 1586 aa35.85■■■■□ 3.33
CHD9-208ENST00000563410 KDM5BQ9UGL1 1544 aa35.85■■■■□ 3.33
CHD9-208ENST00000563410 PRXQ9BXM0 1461 aa35.83■■■■□ 3.33
CHD9-208ENST00000563410 PPRC1Q5VV67 1664 aaKnown RBP35.82■■■■□ 3.33
CHD9-208ENST00000563410 ZCCHC11Q5TAX3 1644 aaKnown RBP35.8■■■■□ 3.32
CHD9-208ENST00000563410 EPRSP07814 1512 aaKnown RBP35.73■■■■□ 3.31
CHD9-208ENST00000563410 GOLGA3Q08378 1498 aa35.71■■■■□ 3.31
CHD9-208ENST00000563410 MAP3K4Q9Y6R4 1608 aa35.68■■■■□ 3.3
CHD9-208ENST00000563410 ABCA8O94911 1581 aa35.64■■■■□ 3.3
CHD9-208ENST00000563410 WDR7Q9Y4E6 1490 aa35.58■■■■□ 3.29
CHD9-208ENST00000563410 KDM4FA0A1W2PPD8 638 aa35.52■■■■□ 3.28
CHD9-208ENST00000563410 CSRNP3Q8WYN3 585 aa35.52■■■■□ 3.28
CHD9-208ENST00000563410 COL17A1Q9UMD9 1497 aaPredicted RBP35.52■■■■□ 3.28
CHD9-208ENST00000563410 TEX14Q8IWB6 1497 aa35.49■■■■□ 3.27
CHD9-208ENST00000563410 CFAP43Q8NDM7 1665 aa35.42■■■■□ 3.26
CHD9-208ENST00000563410 SAMD9Q5K651 1589 aa35.42■■■■□ 3.26
CHD9-208ENST00000563410 P3H3Q8IVL6 736 aa35.4■■■■□ 3.26
CHD9-208ENST00000563410 EEA1Q15075 1411 aa35.37■■■■□ 3.25
CHD9-208ENST00000563410 KCNH8Q96L42 1107 aa35.36■■■■□ 3.25
CHD9-208ENST00000563410 CD109Q6YHK3 1445 aa35.34■■■■□ 3.25
CHD9-208ENST00000563410 MAGI3Q5TCQ9 1506 aa35.34■■■■□ 3.25
CHD9-208ENST00000563410 ATP10BO94823 1461 aa35.31■■■■□ 3.24
CHD9-208ENST00000563410 FAM9AQ8IZU1 332 aaPredicted RBP35.27■■■■□ 3.24
CHD9-208ENST00000563410 RAPGEF6Q8TEU7 1601 aa35.26■■■■□ 3.24
CHD9-208ENST00000563410 ARID3CA6NKF2 412 aa35.26■■■■□ 3.24
CHD9-208ENST00000563410 ADGRL1O94910 1474 aa35.24■■■■□ 3.23
CHD9-208ENST00000563410 KIF21BO75037 1637 aa35.16■■■■□ 3.22
CHD9-208ENST00000563410 ABCA9Q8IUA7 1624 aa35.15■■■■□ 3.22
CHD9-208ENST00000563410 FHOD3Q2V2M9 1422 aa35.13■■■■□ 3.21
CHD9-208ENST00000563410 RANGAP1P46060 587 aaPredicted RBP35.12■■■■□ 3.21
CHD9-208ENST00000563410 NUP153P49790 1475 aaKnown RBP35.11■■■■□ 3.21
CHD9-208ENST00000563410 ARAP3Q8WWN8 1544 aa35.07■■■■□ 3.21
CHD9-208ENST00000563410 EFCAB5A4FU69 1503 aa35.02■■■■□ 3.2
CHD9-208ENST00000563410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.01■■■■□ 3.2
CHD9-208ENST00000563410 HNRNPUL2Q1KMD3 747 aaKnown RBP35.01■■■■□ 3.2
CHD9-208ENST00000563410 PHLDB1Q86UU1 1377 aa34.95■■■■□ 3.19
CHD9-208ENST00000563410 NEO1Q92859 1461 aa34.92■■■■□ 3.18
CHD9-208ENST00000563410 CHIC1Q5VXU3 224 aa34.92■■■■□ 3.18
CHD9-208ENST00000563410 PLEKHD1A6NEE1 506 aa34.85■■■■□ 3.17
CHD9-208ENST00000563410 FRMPD1Q5SYB0 1578 aa34.83■■■■□ 3.17
CHD9-208ENST00000563410 RAPGEF3O95398 923 aa34.83■■■■□ 3.17
CHD9-208ENST00000563410 EHMT2Q96KQ7 1210 aa34.82■■■■□ 3.16
CHD9-208ENST00000563410 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.8■■■■□ 3.162e-6■■■□□ 15.9
CHD9-208ENST00000563410 UBTFP17480 764 aaKnown RBP34.79■■■■□ 3.16
CHD9-208ENST00000563410 CDK13Q14004 1512 aaKnown RBP34.78■■■■□ 3.16
CHD9-208ENST00000563410 TTC37Q6PGP7 1564 aa34.76■■■■□ 3.16
CHD9-208ENST00000563410 HECW2Q9P2P5 1572 aa34.76■■■■□ 3.16
CHD9-208ENST00000563410 ARHGAP35Q9NRY4 1499 aa34.74■■■■□ 3.15
CHD9-208ENST00000563410 RICTORQ6R327 1708 aa34.72■■■■□ 3.15
CHD9-208ENST00000563410 CFAP74Q9C0B2 1584 aa34.7■■■■□ 3.15
CHD9-208ENST00000563410 AKNAQ7Z591 1439 aa34.69■■■■□ 3.14
CHD9-208ENST00000563410 FANCAO15360 1455 aa34.69■■■■□ 3.14
CHD9-208ENST00000563410 ADAMTSL3P82987 1691 aa34.69■■■■□ 3.14
CHD9-208ENST00000563410 FMN1Q68DA7 1419 aa34.68■■■■□ 3.14
CHD9-208ENST00000563410 HECW1Q76N89 1606 aa34.67■■■■□ 3.14
CHD9-208ENST00000563410 DENND4BO75064 1496 aaPredicted RBP34.65■■■■□ 3.14
CHD9-208ENST00000563410 BCORL1Q5H9F3 1711 aa34.61■■■■□ 3.13
CHD9-208ENST00000563410 ARHGEF40Q8TER5 1519 aa34.6■■■■□ 3.13
CHD9-208ENST00000563410 ATP1B4Q9UN42 357 aaPredicted RBP34.57■■■■□ 3.12
CHD9-208ENST00000563410 LRRIQ1Q96JM4 1722 aa34.57■■■■□ 3.12
CHD9-208ENST00000563410 PTPRMP28827 1452 aa34.55■■■■□ 3.12
CHD9-208ENST00000563410 ZMYM4Q5VZL5 1548 aa34.55■■■■□ 3.12
CHD9-208ENST00000563410 PLCH2O75038 1416 aa34.55■■■■□ 3.12
CHD9-208ENST00000563410 MYO5CQ9NQX4 1742 aa34.52■■■■□ 3.12
CHD9-208ENST00000563410 MADDQ8WXG6 1647 aa34.52■■■■□ 3.12
CHD9-208ENST00000563410 KIF14Q15058 1648 aa34.5■■■■□ 3.11
CHD9-208ENST00000563410 ARID4BQ4LE39 1312 aaPredicted RBP34.5■■■■□ 3.11
CHD9-208ENST00000563410 CDK11AQ9UQ88 783 aaPredicted RBP34.46■■■■□ 3.11
CHD9-208ENST00000563410 SIGLEC1Q9BZZ2 1709 aa34.46■■■■□ 3.11
CHD9-208ENST00000563410 ZFYVE16Q7Z3T8 1539 aa34.45■■■■□ 3.11
CHD9-208ENST00000563410 SCAPERQ9BY12 1400 aa34.45■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms