RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
TRADD-203ENST00000563348 RUSC2Q8N2Y8 1516 aa32.33■■■□□ 2.77
TRADD-203ENST00000563348 KIAA0586Q9BVV6 1533 aa32.32■■■□□ 2.76
TRADD-203ENST00000563348 TRHP20396 242 aaPredicted RBP32.2■■■□□ 2.75
TRADD-203ENST00000563348 RAPGEF2Q9Y4G8 1499 aa32.18■■■□□ 2.74
TRADD-203ENST00000563348 PRXQ9BXM0 1461 aa32.02■■■□□ 2.72
TRADD-203ENST00000563348 IQGAP2Q13576 1575 aa32.02■■■□□ 2.72
TRADD-203ENST00000563348 CSRNP3Q8WYN3 585 aa31.99■■■□□ 2.71
TRADD-203ENST00000563348 CARMIL2Q6F5E8 1435 aa31.99■■■□□ 2.71
TRADD-203ENST00000563348 PTPRGP23470 1445 aa31.95■■■□□ 2.71
TRADD-203ENST00000563348 TNIKQ9UKE5 1360 aa31.93■■■□□ 2.7
TRADD-203ENST00000563348 CHIC1Q5VXU3 224 aa31.91■■■□□ 2.7
TRADD-203ENST00000563348 NPM1P06748 294 aaKnown RBP eCLIP31.9■■■□□ 2.7
TRADD-203ENST00000563348 EEA1Q15075 1411 aa31.89■■■□□ 2.7
TRADD-203ENST00000563348 UGGT2Q9NYU1 1516 aa31.88■■■□□ 2.69
TRADD-203ENST00000563348 DISP1Q96F81 1524 aa31.87■■■□□ 2.69
TRADD-203ENST00000563348 TTBK1Q5TCY1 1321 aaPredicted RBP31.87■■■□□ 2.69
TRADD-203ENST00000563348 ADCY10Q96PN6 1610 aa31.8■■■□□ 2.68
TRADD-203ENST00000563348 FAM9AQ8IZU1 332 aaPredicted RBP31.79■■■□□ 2.68
TRADD-203ENST00000563348 CTTNBP2Q8WZ74 1663 aa31.74■■■□□ 2.67
TRADD-203ENST00000563348 KIAA0556O60303 1618 aa31.71■■■□□ 2.67
TRADD-203ENST00000563348 UACAQ9BZF9 1416 aa31.7■■■□□ 2.67
TRADD-203ENST00000563348 GOLGA3Q08378 1498 aa31.69■■■□□ 2.66
TRADD-203ENST00000563348 MAPKBP1O60336 1514 aa31.69■■■□□ 2.66
TRADD-203ENST00000563348 UHRF1BP1LA0JNW5 1464 aa31.67■■■□□ 2.66
TRADD-203ENST00000563348 ABCC2Q92887 1545 aa31.65■■■□□ 2.66
TRADD-203ENST00000563348 FAM69CQ0P6D2 419 aa31.64■■■□□ 2.66
TRADD-203ENST00000563348 ABCC10Q5T3U5 1492 aa31.64■■■□□ 2.66
TRADD-203ENST00000563348 KIF13AQ9H1H9 1805 aa31.55■■■□□ 2.64
TRADD-203ENST00000563348 P3H3Q8IVL6 736 aa31.52■■■□□ 2.64
TRADD-203ENST00000563348 KDM5BQ9UGL1 1544 aa31.51■■■□□ 2.63
TRADD-203ENST00000563348 KIF21BO75037 1637 aa31.5■■■□□ 2.63
TRADD-203ENST00000563348 DIP2BQ9P265 1576 aa31.49■■■□□ 2.63
TRADD-203ENST00000563348 PLB1Q6P1J6 1458 aa31.49■■■□□ 2.63
TRADD-203ENST00000563348 ASXL2Q76L83 1435 aa31.49■■■□□ 2.63
TRADD-203ENST00000563348 ABCA8O94911 1581 aa31.43■■■□□ 2.62
TRADD-203ENST00000563348 RANGAP1P46060 587 aaPredicted RBP31.42■■■□□ 2.62
TRADD-203ENST00000563348 SAMD9Q5K651 1589 aa31.4■■■□□ 2.62
TRADD-203ENST00000563348 UBTFP17480 764 aaKnown RBP31.39■■■□□ 2.62
TRADD-203ENST00000563348 EHMT2Q96KQ7 1210 aa31.37■■■□□ 2.61
TRADD-203ENST00000563348 ZCCHC11Q5TAX3 1644 aaKnown RBP31.36■■■□□ 2.61
TRADD-203ENST00000563348 GLI2P10070 1586 aa31.3■■■□□ 2.6
TRADD-203ENST00000563348 EPRSP07814 1512 aaKnown RBP31.29■■■□□ 2.6
TRADD-203ENST00000563348 FHOD3Q2V2M9 1422 aa31.26■■■□□ 2.6
TRADD-203ENST00000563348 WDR7Q9Y4E6 1490 aa31.26■■■□□ 2.59
TRADD-203ENST00000563348 ARID3CA6NKF2 412 aa31.23■■■□□ 2.59
TRADD-203ENST00000563348 ATP10BO94823 1461 aa31.22■■■□□ 2.59
TRADD-203ENST00000563348 EFCAB5A4FU69 1503 aa31.22■■■□□ 2.59
TRADD-203ENST00000563348 TSPOAP1O95153 1857 aa31.21■■■□□ 2.59
TRADD-203ENST00000563348 KCNH8Q96L42 1107 aa31.2■■■□□ 2.59
TRADD-203ENST00000563348 RAPGEF6Q8TEU7 1601 aa31.16■■■□□ 2.58
TRADD-203ENST00000563348 NUP153P49790 1475 aaKnown RBP31.1■■■□□ 2.57
TRADD-203ENST00000563348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.1■■■□□ 2.57
TRADD-203ENST00000563348 HNRNPUL2Q1KMD3 747 aaKnown RBP31.1■■■□□ 2.57
TRADD-203ENST00000563348 MAP3K4Q9Y6R4 1608 aa31.09■■■□□ 2.57
TRADD-203ENST00000563348 PPRC1Q5VV67 1664 aaKnown RBP31.08■■■□□ 2.57
TRADD-203ENST00000563348 ARHGAP35Q9NRY4 1499 aa31.08■■■□□ 2.57
TRADD-203ENST00000563348 KDM6BO15054 1643 aa31.06■■■□□ 2.56
TRADD-203ENST00000563348 CD109Q6YHK3 1445 aa31.05■■■□□ 2.56
TRADD-203ENST00000563348 TEX14Q8IWB6 1497 aa31.03■■■□□ 2.56
TRADD-203ENST00000563348 FMN1Q68DA7 1419 aa30.99■■■□□ 2.55
TRADD-203ENST00000563348 PLEKHD1A6NEE1 506 aa30.99■■■□□ 2.55
TRADD-203ENST00000563348 MAGI3Q5TCQ9 1506 aa30.98■■■□□ 2.55
TRADD-203ENST00000563348 CFAP43Q8NDM7 1665 aa30.96■■■□□ 2.55
TRADD-203ENST00000563348 COL17A1Q9UMD9 1497 aaPredicted RBP30.95■■■□□ 2.54
TRADD-203ENST00000563348 ATP1B4Q9UN42 357 aaPredicted RBP30.92■■■□□ 2.54
TRADD-203ENST00000563348 ABCA9Q8IUA7 1624 aa30.85■■■□□ 2.53
TRADD-203ENST00000563348 CDK13Q14004 1512 aaKnown RBP30.83■■■□□ 2.53
TRADD-203ENST00000563348 CLIP1P30622 1438 aa30.81■■■□□ 2.52
TRADD-203ENST00000563348 AEBP2Q6ZN18 517 aaPredicted RBP30.8■■■□□ 2.52
TRADD-203ENST00000563348 HECW1Q76N89 1606 aa30.79■■■□□ 2.52
TRADD-203ENST00000563348 CDK11AQ9UQ88 783 aaPredicted RBP30.78■■■□□ 2.52
TRADD-203ENST00000563348 PHLDB1Q86UU1 1377 aa30.78■■■□□ 2.52
TRADD-203ENST00000563348 ARAP3Q8WWN8 1544 aa30.73■■■□□ 2.51
TRADD-203ENST00000563348 CASKIN1Q8WXD9 1431 aa30.73■■■□□ 2.51
TRADD-203ENST00000563348 NEO1Q92859 1461 aa30.7■■■□□ 2.5
TRADD-203ENST00000563348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.69■■■□□ 2.5
TRADD-203ENST00000563348 KDM4FA0A1W2PPD8 638 aa30.64■■■□□ 2.5
TRADD-203ENST00000563348 TROQ12816 1431 aaPredicted RBP30.63■■■□□ 2.49
TRADD-203ENST00000563348 LOC105371045A0A1W2PR82 267 aa30.62■■■□□ 2.49
TRADD-203ENST00000563348 RAPGEF3O95398 923 aa30.61■■■□□ 2.49
TRADD-203ENST00000563348 PCF11O94913 1555 aaKnown RBP30.61■■■□□ 2.49
TRADD-203ENST00000563348 TTC37Q6PGP7 1564 aa30.59■■■□□ 2.49
TRADD-203ENST00000563348 CCDC18Q5T9S5 1454 aa30.59■■■□□ 2.49
TRADD-203ENST00000563348 FYCO1Q9BQS8 1478 aa30.58■■■□□ 2.49
TRADD-203ENST00000563348 FANCAO15360 1455 aa30.57■■■□□ 2.48
TRADD-203ENST00000563348 PLCH2O75038 1416 aa30.57■■■□□ 2.48
TRADD-203ENST00000563348 CEP162Q5TB80 1403 aa30.57■■■□□ 2.48
TRADD-203ENST00000563348 AKNAQ7Z591 1439 aa30.57■■■□□ 2.48
TRADD-203ENST00000563348 LRRIQ1Q96JM4 1722 aa30.57■■■□□ 2.48
TRADD-203ENST00000563348 EFCAB2Q5VUJ9 269 aa30.51■■■□□ 2.47
TRADD-203ENST00000563348 DENND4BO75064 1496 aaPredicted RBP30.5■■■□□ 2.47
TRADD-203ENST00000563348 KIF14Q15058 1648 aa30.48■■■□□ 2.47
TRADD-203ENST00000563348 CFAP74Q9C0B2 1584 aa30.47■■■□□ 2.47
TRADD-203ENST00000563348 ADGRL1O94910 1474 aa30.44■■■□□ 2.46
TRADD-203ENST00000563348 FRMPD1Q5SYB0 1578 aa30.41■■■□□ 2.46
TRADD-203ENST00000563348 SCAPERQ9BY12 1400 aa30.41■■■□□ 2.46
TRADD-203ENST00000563348 MYO5CQ9NQX4 1742 aa30.39■■■□□ 2.45
TRADD-203ENST00000563348 RICTORQ6R327 1708 aa30.34■■■□□ 2.45
TRADD-203ENST00000563348 ARHGAP5Q13017 1502 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms