RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
FANCA-210ENST00000563318 CARMIL1Q5VZK9 1371 aa21.03■□□□□ 0.96
FANCA-210ENST00000563318 TRIM41Q8WV44 630 aa21.03■□□□□ 0.96
FANCA-210ENST00000563318 ERCC6L2Q5T890 1561 aa20.98■□□□□ 0.95
FANCA-210ENST00000563318 KIAA0586Q9BVV6 1533 aa20.96■□□□□ 0.95
FANCA-210ENST00000563318 PRXQ9BXM0 1461 aa20.92■□□□□ 0.94
FANCA-210ENST00000563318 RAPGEF2Q9Y4G8 1499 aa20.91■□□□□ 0.94
FANCA-210ENST00000563318 CYB5RLQ6IPT4 315 aa20.9■□□□□ 0.94
FANCA-210ENST00000563318 JPH4Q96JJ6 628 aa20.88■□□□□ 0.93
FANCA-210ENST00000563318 PRG4Q92954 1404 aaPredicted RBP20.87■□□□□ 0.93
FANCA-210ENST00000563318 EEA1Q15075 1411 aa20.82■□□□□ 0.92
FANCA-210ENST00000563318 IQGAP2Q13576 1575 aa20.8■□□□□ 0.92
FANCA-210ENST00000563318 UGGT2Q9NYU1 1516 aa20.75■□□□□ 0.91
FANCA-210ENST00000563318 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
FANCA-210ENST00000563318 DISP1Q96F81 1524 aa20.73■□□□□ 0.91
FANCA-210ENST00000563318 CTTNBP2Q8WZ74 1663 aa20.69■□□□□ 0.9
FANCA-210ENST00000563318 FOXD1Q16676 465 aa20.68■□□□□ 0.9
FANCA-210ENST00000563318 KIF21BO75037 1637 aa20.64■□□□□ 0.9
FANCA-210ENST00000563318 KIAA0556O60303 1618 aa20.64■□□□□ 0.89
FANCA-210ENST00000563318 CARMIL2Q6F5E8 1435 aa20.63■□□□□ 0.89
FANCA-210ENST00000563318 TNIKQ9UKE5 1360 aa20.62■□□□□ 0.89
FANCA-210ENST00000563318 ADCY10Q96PN6 1610 aa20.62■□□□□ 0.89
FANCA-210ENST00000563318 PTPRGP23470 1445 aa20.59■□□□□ 0.89
FANCA-210ENST00000563318 ADRA2BP18089 450 aa20.58■□□□□ 0.89
FANCA-210ENST00000563318 UHRF1BP1LA0JNW5 1464 aa20.55■□□□□ 0.88
FANCA-210ENST00000563318 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
FANCA-210ENST00000563318 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
FANCA-210ENST00000563318 SAMD9Q5K651 1589 aa20.53■□□□□ 0.88
FANCA-210ENST00000563318 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
FANCA-210ENST00000563318 MAPKBP1O60336 1514 aa20.52■□□□□ 0.87
FANCA-210ENST00000563318 UACAQ9BZF9 1416 aa20.49■□□□□ 0.87
FANCA-210ENST00000563318 ABCC2Q92887 1545 aa20.48■□□□□ 0.87
FANCA-210ENST00000563318 KDM5BQ9UGL1 1544 aa20.45■□□□□ 0.86
FANCA-210ENST00000563318 ABCA8O94911 1581 aa20.45■□□□□ 0.86
FANCA-210ENST00000563318 PLB1Q6P1J6 1458 aa20.42■□□□□ 0.86
FANCA-210ENST00000563318 ABCC10Q5T3U5 1492 aa20.41■□□□□ 0.86
FANCA-210ENST00000563318 KIF13AQ9H1H9 1805 aa20.39■□□□□ 0.85
FANCA-210ENST00000563318 TRHP20396 242 aaPredicted RBP20.38■□□□□ 0.85
FANCA-210ENST00000563318 DIP2BQ9P265 1576 aa20.38■□□□□ 0.85
FANCA-210ENST00000563318 EFCAB5A4FU69 1503 aa20.37■□□□□ 0.85
FANCA-210ENST00000563318 TTBK1Q5TCY1 1321 aaPredicted RBP20.34■□□□□ 0.85
FANCA-210ENST00000563318 ZCCHC11Q5TAX3 1644 aaKnown RBP20.34■□□□□ 0.85
FANCA-210ENST00000563318 NPM1P06748 294 aaKnown RBP eCLIP20.33■□□□□ 0.85
FANCA-210ENST00000563318 ASXL2Q76L83 1435 aa20.33■□□□□ 0.84
FANCA-210ENST00000563318 FHOD3Q2V2M9 1422 aa20.31■□□□□ 0.84
FANCA-210ENST00000563318 P3H3Q8IVL6 736 aa20.29■□□□□ 0.84
FANCA-210ENST00000563318 ARHGAP35Q9NRY4 1499 aa20.29■□□□□ 0.84
FANCA-210ENST00000563318 GLI2P10070 1586 aa20.28■□□□□ 0.84
FANCA-210ENST00000563318 RAPGEF6Q8TEU7 1601 aa20.26■□□□□ 0.83
FANCA-210ENST00000563318 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
FANCA-210ENST00000563318 ATP10BO94823 1461 aa20.24■□□□□ 0.83
FANCA-210ENST00000563318 NUP153P49790 1475 aaKnown RBP20.24■□□□□ 0.83
FANCA-210ENST00000563318 EPRSP07814 1512 aaKnown RBP20.24■□□□□ 0.83
FANCA-210ENST00000563318 FAM69CQ0P6D2 419 aa20.23■□□□□ 0.83
FANCA-210ENST00000563318 WDR7Q9Y4E6 1490 aa20.23■□□□□ 0.83
FANCA-210ENST00000563318 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
FANCA-210ENST00000563318 PPRC1Q5VV67 1664 aaKnown RBP20.17■□□□□ 0.82
FANCA-210ENST00000563318 RANGAP1P46060 587 aaPredicted RBP20.17■□□□□ 0.82
FANCA-210ENST00000563318 MAP3K4Q9Y6R4 1608 aa20.16■□□□□ 0.82
FANCA-210ENST00000563318 FMN1Q68DA7 1419 aa20.14■□□□□ 0.81
FANCA-210ENST00000563318 CLIP1P30622 1438 aa20.08■□□□□ 0.8
FANCA-210ENST00000563318 CFAP43Q8NDM7 1665 aa20.05■□□□□ 0.8
FANCA-210ENST00000563318 MAGI3Q5TCQ9 1506 aa20.05■□□□□ 0.8
FANCA-210ENST00000563318 HECW1Q76N89 1606 aa20.05■□□□□ 0.8
FANCA-210ENST00000563318 ABCA9Q8IUA7 1624 aa20.05■□□□□ 0.8
FANCA-210ENST00000563318 CDK13Q14004 1512 aaKnown RBP20.04■□□□□ 0.8
FANCA-210ENST00000563318 ARID3CA6NKF2 412 aa20.04■□□□□ 0.8
FANCA-210ENST00000563318 TSPOAP1O95153 1857 aa20.03■□□□□ 0.8
FANCA-210ENST00000563318 CASKIN1Q8WXD9 1431 aa20.02■□□□□ 0.8
FANCA-210ENST00000563318 PCF11O94913 1555 aaKnown RBP20.02■□□□□ 0.8
FANCA-210ENST00000563318 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.79
FANCA-210ENST00000563318 CEP162Q5TB80 1403 aa20■□□□□ 0.79
FANCA-210ENST00000563318 CD109Q6YHK3 1445 aa20■□□□□ 0.79
FANCA-210ENST00000563318 COL17A1Q9UMD9 1497 aaPredicted RBP19.99■□□□□ 0.79
FANCA-210ENST00000563318 TEX14Q8IWB6 1497 aa19.99■□□□□ 0.79
FANCA-210ENST00000563318 FYCO1Q9BQS8 1478 aa19.98■□□□□ 0.79
FANCA-210ENST00000563318 KDM6BO15054 1643 aa19.98■□□□□ 0.79
FANCA-210ENST00000563318 KCNH8Q96L42 1107 aa19.97■□□□□ 0.79
FANCA-210ENST00000563318 LOC105371045A0A1W2PR82 267 aa19.94■□□□□ 0.78
FANCA-210ENST00000563318 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.93■□□□□ 0.78
FANCA-210ENST00000563318 PLEKHD1A6NEE1 506 aa19.92■□□□□ 0.78
FANCA-210ENST00000563318 CCDC18Q5T9S5 1454 aa19.92■□□□□ 0.78
FANCA-210ENST00000563318 TTC37Q6PGP7 1564 aa19.91■□□□□ 0.78
FANCA-210ENST00000563318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.89■□□□□ 0.77
FANCA-210ENST00000563318 TROQ12816 1431 aaPredicted RBP19.89■□□□□ 0.77
FANCA-210ENST00000563318 HNRNPUL2Q1KMD3 747 aaKnown RBP19.89■□□□□ 0.77
FANCA-210ENST00000563318 ARAP3Q8WWN8 1544 aa19.88■□□□□ 0.77
FANCA-210ENST00000563318 NEO1Q92859 1461 aa19.86■□□□□ 0.77
FANCA-210ENST00000563318 KIF14Q15058 1648 aa19.86■□□□□ 0.77
FANCA-210ENST00000563318 PHLDB1Q86UU1 1377 aa19.84■□□□□ 0.77
FANCA-210ENST00000563318 KCNA4P22459 653 aa19.84■□□□□ 0.77
FANCA-210ENST00000563318 CDK11AQ9UQ88 783 aaPredicted RBP19.81■□□□□ 0.76
FANCA-210ENST00000563318 PLCH2O75038 1416 aa19.81■□□□□ 0.76
FANCA-210ENST00000563318 ATP1B4Q9UN42 357 aaPredicted RBP19.8■□□□□ 0.76
FANCA-210ENST00000563318 FRMPD1Q5SYB0 1578 aa19.78■□□□□ 0.76
FANCA-210ENST00000563318 VPS8Q8N3P4 1428 aa19.77■□□□□ 0.76
FANCA-210ENST00000563318 FANCAO15360 1455 aa19.77■□□□□ 0.76
FANCA-210ENST00000563318 AKNAQ7Z591 1439 aa19.75■□□□□ 0.75
FANCA-210ENST00000563318 CFAP74Q9C0B2 1584 aa19.74■□□□□ 0.75
FANCA-210ENST00000563318 MYO5CQ9NQX4 1742 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms