RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 KIF27Q86VH2 1401 aa37.19■■■■□ 3.54
GGA2-204ENST00000563047 CUL7Q14999 1698 aa37.12■■■■□ 3.53
GGA2-204ENST00000563047 KIAA0586Q9BVV6 1533 aa37.1■■■■□ 3.53
GGA2-204ENST00000563047 KIF13AQ9H1H9 1805 aa37.08■■■■□ 3.53
GGA2-204ENST00000563047 ADCY10Q96PN6 1610 aa36.97■■■■□ 3.51
GGA2-204ENST00000563047 CARMIL1Q5VZK9 1371 aa36.96■■■■□ 3.51
GGA2-204ENST00000563047 NPM1P06748 294 aaKnown RBP eCLIP36.94■■■■□ 3.5
GGA2-204ENST00000563047 AEBP2Q6ZN18 517 aaPredicted RBP36.94■■■■□ 3.5
GGA2-204ENST00000563047 MAPKBP1O60336 1514 aa36.92■■■■□ 3.5
GGA2-204ENST00000563047 ABCC10Q5T3U5 1492 aa36.92■■■■□ 3.5
GGA2-204ENST00000563047 FAM69CQ0P6D2 419 aa36.89■■■■□ 3.5
GGA2-204ENST00000563047 DIP2BQ9P265 1576 aa36.82■■■■□ 3.48
GGA2-204ENST00000563047 PTPRGP23470 1445 aa36.77■■■■□ 3.48
GGA2-204ENST00000563047 IQGAP2Q13576 1575 aa36.73■■■■□ 3.47
GGA2-204ENST00000563047 CARMIL2Q6F5E8 1435 aa36.71■■■■□ 3.47
GGA2-204ENST00000563047 TNIKQ9UKE5 1360 aa36.7■■■■□ 3.47
GGA2-204ENST00000563047 TTBK1Q5TCY1 1321 aaPredicted RBP36.69■■■■□ 3.46
GGA2-204ENST00000563047 RAPGEF2Q9Y4G8 1499 aa36.61■■■■□ 3.45
GGA2-204ENST00000563047 ABCC2Q92887 1545 aa36.59■■■■□ 3.45
GGA2-204ENST00000563047 DISP1Q96F81 1524 aa36.59■■■■□ 3.45
GGA2-204ENST00000563047 TSPOAP1O95153 1857 aa36.56■■■■□ 3.44
GGA2-204ENST00000563047 UHRF1BP1LA0JNW5 1464 aa36.52■■■■□ 3.44
GGA2-204ENST00000563047 KDM6BO15054 1643 aa36.51■■■■□ 3.43
GGA2-204ENST00000563047 UGGT2Q9NYU1 1516 aa36.5■■■■□ 3.43
GGA2-204ENST00000563047 UACAQ9BZF9 1416 aa36.5■■■■□ 3.43
GGA2-204ENST00000563047 ASXL2Q76L83 1435 aa36.49■■■■□ 3.43
GGA2-204ENST00000563047 PLB1Q6P1J6 1458 aa36.44■■■■□ 3.42
GGA2-204ENST00000563047 KIAA0556O60303 1618 aa36.41■■■■□ 3.42
GGA2-204ENST00000563047 GLI2P10070 1586 aa36.39■■■■□ 3.42
GGA2-204ENST00000563047 KDM5BQ9UGL1 1544 aa36.37■■■■□ 3.41
GGA2-204ENST00000563047 PPRC1Q5VV67 1664 aaKnown RBP36.34■■■■□ 3.41
GGA2-204ENST00000563047 CTTNBP2Q8WZ74 1663 aa36.3■■■■□ 3.4
GGA2-204ENST00000563047 ZCCHC11Q5TAX3 1644 aaKnown RBP36.28■■■■□ 3.4
GGA2-204ENST00000563047 EPRSP07814 1512 aaKnown RBP36.27■■■■□ 3.4
GGA2-204ENST00000563047 KDM4FA0A1W2PPD8 638 aa36.22■■■■□ 3.39
GGA2-204ENST00000563047 PRXQ9BXM0 1461 aa36.22■■■■□ 3.39
GGA2-204ENST00000563047 MAP3K4Q9Y6R4 1608 aa36.19■■■■□ 3.38
GGA2-204ENST00000563047 GOLGA3Q08378 1498 aa36.17■■■■□ 3.38
GGA2-204ENST00000563047 COL17A1Q9UMD9 1497 aaPredicted RBP36.11■■■■□ 3.37
GGA2-204ENST00000563047 WDR7Q9Y4E6 1490 aa36.11■■■■□ 3.37
GGA2-204ENST00000563047 ABCA8O94911 1581 aa36.09■■■■□ 3.37
GGA2-204ENST00000563047 TEX14Q8IWB6 1497 aa36.06■■■■□ 3.36
GGA2-204ENST00000563047 KCNH8Q96L42 1107 aa35.92■■■■□ 3.34
GGA2-204ENST00000563047 CSRNP3Q8WYN3 585 aa35.9■■■■□ 3.34
GGA2-204ENST00000563047 CD109Q6YHK3 1445 aa35.9■■■■□ 3.34
GGA2-204ENST00000563047 CFAP43Q8NDM7 1665 aa35.89■■■■□ 3.34
GGA2-204ENST00000563047 ADGRL1O94910 1474 aa35.89■■■■□ 3.34
GGA2-204ENST00000563047 P3H3Q8IVL6 736 aa35.89■■■■□ 3.34
GGA2-204ENST00000563047 MAGI3Q5TCQ9 1506 aa35.88■■■■□ 3.33
GGA2-204ENST00000563047 ARID3CA6NKF2 412 aa35.8■■■■□ 3.32
GGA2-204ENST00000563047 SAMD9Q5K651 1589 aa35.8■■■■□ 3.32
GGA2-204ENST00000563047 ATP10BO94823 1461 aa35.8■■■■□ 3.32
GGA2-204ENST00000563047 FAM9AQ8IZU1 332 aaPredicted RBP35.78■■■■□ 3.32
GGA2-204ENST00000563047 EEA1Q15075 1411 aa35.71■■■■□ 3.31
GGA2-204ENST00000563047 RAPGEF6Q8TEU7 1601 aa35.67■■■■□ 3.3
GGA2-204ENST00000563047 ABCA9Q8IUA7 1624 aa35.61■■■■□ 3.29
GGA2-204ENST00000563047 ARAP3Q8WWN8 1544 aa35.6■■■■□ 3.29
GGA2-204ENST00000563047 RANGAP1P46060 587 aaPredicted RBP35.59■■■■□ 3.29
GGA2-204ENST00000563047 NUP153P49790 1475 aaKnown RBP35.56■■■■□ 3.28
GGA2-204ENST00000563047 FHOD3Q2V2M9 1422 aa35.56■■■■□ 3.28
GGA2-204ENST00000563047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.53■■■■□ 3.28
GGA2-204ENST00000563047 HNRNPUL2Q1KMD3 747 aaKnown RBP35.53■■■■□ 3.28
GGA2-204ENST00000563047 KIF21BO75037 1637 aa35.5■■■■□ 3.27
GGA2-204ENST00000563047 PHLDB1Q86UU1 1377 aa35.5■■■■□ 3.27
GGA2-204ENST00000563047 NEO1Q92859 1461 aa35.43■■■■□ 3.26
GGA2-204ENST00000563047 HECW2Q9P2P5 1572 aa35.42■■■■□ 3.26
GGA2-204ENST00000563047 RAPGEF3O95398 923 aa35.4■■■■□ 3.26
GGA2-204ENST00000563047 EFCAB5A4FU69 1503 aa35.39■■■■□ 3.26
GGA2-204ENST00000563047 PLEKHD1A6NEE1 506 aa35.35■■■■□ 3.25
GGA2-204ENST00000563047 FRMPD1Q5SYB0 1578 aa35.33■■■■□ 3.25
GGA2-204ENST00000563047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.26■■■■□ 3.23
GGA2-204ENST00000563047 ADAMTSL3P82987 1691 aa35.23■■■■□ 3.23
GGA2-204ENST00000563047 EHMT2Q96KQ7 1210 aa35.22■■■■□ 3.23
GGA2-204ENST00000563047 CDK13Q14004 1512 aaKnown RBP35.21■■■■□ 3.23
GGA2-204ENST00000563047 AKNAQ7Z591 1439 aa35.2■■■■□ 3.23
GGA2-204ENST00000563047 TTC37Q6PGP7 1564 aa35.2■■■■□ 3.23
GGA2-204ENST00000563047 FANCAO15360 1455 aa35.19■■■■□ 3.22
GGA2-204ENST00000563047 ILDR1Q86SU0 546 aaPredicted RBP35.19■■■■□ 3.22
GGA2-204ENST00000563047 DENND4BO75064 1496 aaPredicted RBP35.18■■■■□ 3.22
GGA2-204ENST00000563047 UBTFP17480 764 aaKnown RBP35.18■■■■□ 3.22
GGA2-204ENST00000563047 CHIC1Q5VXU3 224 aa35.17■■■■□ 3.22
GGA2-204ENST00000563047 RICTORQ6R327 1708 aa35.16■■■■□ 3.22
GGA2-204ENST00000563047 PTPRMP28827 1452 aa35.16■■■■□ 3.22
GGA2-204ENST00000563047 CFAP74Q9C0B2 1584 aa35.15■■■■□ 3.22
GGA2-204ENST00000563047 BCORL1Q5H9F3 1711 aa35.14■■■■□ 3.22
GGA2-204ENST00000563047 ARHGEF40Q8TER5 1519 aa35.12■■■■□ 3.21
GGA2-204ENST00000563047 ARHGAP35Q9NRY4 1499 aa35.1■■■■□ 3.21
GGA2-204ENST00000563047 ARID4BQ4LE39 1312 aaPredicted RBP35.1■■■■□ 3.21
GGA2-204ENST00000563047 FMN1Q68DA7 1419 aa35.08■■■■□ 3.21
GGA2-204ENST00000563047 MADDQ8WXG6 1647 aa35.06■■■■□ 3.2
GGA2-204ENST00000563047 HECW1Q76N89 1606 aa35.05■■■■□ 3.2
GGA2-204ENST00000563047 ATP1B4Q9UN42 357 aaPredicted RBP35.04■■■■□ 3.2
GGA2-204ENST00000563047 ZMYM4Q5VZL5 1548 aa35.03■■■■□ 3.2
GGA2-204ENST00000563047 PLCH2O75038 1416 aa35.02■■■■□ 3.2
GGA2-204ENST00000563047 YEATS2Q9ULM3 1422 aa34.98■■■■□ 3.19
GGA2-204ENST00000563047 ZFYVE16Q7Z3T8 1539 aa34.96■■■■□ 3.19
GGA2-204ENST00000563047 SCAPERQ9BY12 1400 aa34.95■■■■□ 3.19
GGA2-204ENST00000563047 SIGLEC1Q9BZZ2 1709 aa34.93■■■■□ 3.18
GGA2-204ENST00000563047 MAGI2Q86UL8 1455 aa34.93■■■■□ 3.18
GGA2-204ENST00000563047 POGZQ7Z3K3 1410 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms