RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 GRIN2AQ12879 1464 aa11.56□□□□□ -0.56
SCAPER-205ENST00000562948 FHAD1B1AJZ9 1412 aa11.56□□□□□ -0.56
SCAPER-205ENST00000562948 LRRIQ1Q96JM4 1722 aa11.55□□□□□ -0.56
SCAPER-205ENST00000562948 ARHGAP35Q9NRY4 1499 aa11.55□□□□□ -0.56
SCAPER-205ENST00000562948 MAGI1Q96QZ7 1491 aaPredicted RBP11.54□□□□□ -0.56
SCAPER-205ENST00000562948 UBTFP17480 764 aaKnown RBP11.53□□□□□ -0.56
SCAPER-205ENST00000562948 SYNJ2O15056 1496 aa11.53□□□□□ -0.56
SCAPER-205ENST00000562948 ERCC6L2Q5T890 1561 aa11.52□□□□□ -0.57
SCAPER-205ENST00000562948 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
SCAPER-205ENST00000562948 NUP160Q12769 1436 aa11.49□□□□□ -0.57
SCAPER-205ENST00000562948 DISP1Q96F81 1524 aa11.48□□□□□ -0.57
SCAPER-205ENST00000562948 CLIP1P30622 1438 aa11.47□□□□□ -0.57
SCAPER-205ENST00000562948 IQGAP2Q13576 1575 aa11.46□□□□□ -0.57
SCAPER-205ENST00000562948 FBLN2P98095 1184 aa11.46□□□□□ -0.58
SCAPER-205ENST00000562948 PPARGC1BQ86YN6 1023 aaKnown RBP11.45□□□□□ -0.58
SCAPER-205ENST00000562948 P3H3Q8IVL6 736 aa11.44□□□□□ -0.58
SCAPER-205ENST00000562948 CLASP1Q7Z460 1538 aa11.44□□□□□ -0.58
SCAPER-205ENST00000562948 FHOD3Q2V2M9 1422 aa11.44□□□□□ -0.58
SCAPER-205ENST00000562948 SHROOM2Q13796 1616 aa11.43□□□□□ -0.58
SCAPER-205ENST00000562948 KIAA0586Q9BVV6 1533 aa11.41□□□□□ -0.58
SCAPER-205ENST00000562948 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
SCAPER-205ENST00000562948 UGGT2Q9NYU1 1516 aa11.41□□□□□ -0.58
SCAPER-205ENST00000562948 KIAA0556O60303 1618 aa11.4□□□□□ -0.58
SCAPER-205ENST00000562948 PCF11O94913 1555 aaKnown RBP11.4□□□□□ -0.58
SCAPER-205ENST00000562948 VPS8Q8N3P4 1428 aa11.36□□□□□ -0.59
SCAPER-205ENST00000562948 MAGI3Q5TCQ9 1506 aa11.34□□□□□ -0.59
SCAPER-205ENST00000562948 KANK4Q5T7N3 995 aaPredicted RBP11.34□□□□□ -0.59
SCAPER-205ENST00000562948 EFCAB5A4FU69 1503 aa11.33□□□□□ -0.6
SCAPER-205ENST00000562948 JPH4Q96JJ6 628 aa11.33□□□□□ -0.6
SCAPER-205ENST00000562948 PLB1Q6P1J6 1458 aa11.32□□□□□ -0.6
SCAPER-205ENST00000562948 PRG4Q92954 1404 aaPredicted RBP11.3□□□□□ -0.6
SCAPER-205ENST00000562948 TTBK1Q5TCY1 1321 aaPredicted RBP11.3□□□□□ -0.6
SCAPER-205ENST00000562948 CDK13Q14004 1512 aaKnown RBP11.28□□□□□ -0.6
SCAPER-205ENST00000562948 NUP153P49790 1475 aaKnown RBP11.28□□□□□ -0.6
SCAPER-205ENST00000562948 CFAP43Q8NDM7 1665 aa11.27□□□□□ -0.6
SCAPER-205ENST00000562948 PCGF6Q9BYE7 350 aa11.27□□□□□ -0.61
SCAPER-205ENST00000562948 TIAM1Q13009 1591 aa11.26□□□□□ -0.61
SCAPER-205ENST00000562948 ABCA8O94911 1581 aa11.25□□□□□ -0.61
SCAPER-205ENST00000562948 ARID3CA6NKF2 412 aa11.25□□□□□ -0.61
SCAPER-205ENST00000562948 CASKIN1Q8WXD9 1431 aa11.24□□□□□ -0.61
SCAPER-205ENST00000562948 RAPGEF6Q8TEU7 1601 aa11.24□□□□□ -0.61
SCAPER-205ENST00000562948 ADCY10Q96PN6 1610 aa11.23□□□□□ -0.61
SCAPER-205ENST00000562948 FYCO1Q9BQS8 1478 aa11.23□□□□□ -0.61
SCAPER-205ENST00000562948 EPRSP07814 1512 aaKnown RBP11.21□□□□□ -0.62
SCAPER-205ENST00000562948 SCAF1Q9H7N4 1312 aaKnown RBP11.21□□□□□ -0.62
SCAPER-205ENST00000562948 OSCARQ8IYS5 282 aa11.2□□□□□ -0.62
SCAPER-205ENST00000562948 RIMBP3CA6NJZ7 1639 aa11.19□□□□□ -0.62
SCAPER-205ENST00000562948 RIMBP3BA6NNM3 1639 aa11.19□□□□□ -0.62
SCAPER-205ENST00000562948 RIMBP3Q9UFD9 1639 aa11.19□□□□□ -0.62
SCAPER-205ENST00000562948 ARHGEF11O15085 1522 aa11.19□□□□□ -0.62
SCAPER-205ENST00000562948 LRRC9Q6ZRR7 1453 aa11.19□□□□□ -0.62
SCAPER-205ENST00000562948 KIF14Q15058 1648 aa11.18□□□□□ -0.62
SCAPER-205ENST00000562948 FMN1Q68DA7 1419 aa11.18□□□□□ -0.62
SCAPER-205ENST00000562948 ABCC2Q92887 1545 aa11.17□□□□□ -0.62
SCAPER-205ENST00000562948 ATP10BO94823 1461 aa11.17□□□□□ -0.62
SCAPER-205ENST00000562948 PHLDB1Q86UU1 1377 aa11.16□□□□□ -0.62
SCAPER-205ENST00000562948 HECW1Q76N89 1606 aa11.16□□□□□ -0.62
SCAPER-205ENST00000562948 ZCCHC11Q5TAX3 1644 aaKnown RBP11.15□□□□□ -0.62
SCAPER-205ENST00000562948 MAP3K1Q13233 1512 aa11.15□□□□□ -0.63
SCAPER-205ENST00000562948 PTPRGP23470 1445 aa11.14□□□□□ -0.63
SCAPER-205ENST00000562948 ATP1B4Q9UN42 357 aaPredicted RBP11.13□□□□□ -0.63
SCAPER-205ENST00000562948 CARMIL2Q6F5E8 1435 aa11.12□□□□□ -0.63
SCAPER-205ENST00000562948 UACAQ9BZF9 1416 aa11.1□□□□□ -0.63
SCAPER-205ENST00000562948 CDC42BPAQ5VT25 1732 aa11.09□□□□□ -0.63
SCAPER-205ENST00000562948 KDM5BQ9UGL1 1544 aa11.08□□□□□ -0.64
SCAPER-205ENST00000562948 TTC37Q6PGP7 1564 aa11.08□□□□□ -0.64
SCAPER-205ENST00000562948 CDC42BPBQ9Y5S2 1711 aa11.07□□□□□ -0.64
SCAPER-205ENST00000562948 NCOA2Q15596 1464 aa11.07□□□□□ -0.64
SCAPER-205ENST00000562948 UHRF1BP1LA0JNW5 1464 aa11.06□□□□□ -0.64
SCAPER-205ENST00000562948 PTPRKQ15262 1439 aa11.05□□□□□ -0.64
SCAPER-205ENST00000562948 CCDC18Q5T9S5 1454 aa11.05□□□□□ -0.64
SCAPER-205ENST00000562948 ABCC10Q5T3U5 1492 aa11.05□□□□□ -0.64
SCAPER-205ENST00000562948 SUPT6HQ7KZ85 1726 aaKnown RBP11.05□□□□□ -0.64
SCAPER-205ENST00000562948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCAPER-205ENST00000562948 RRBP1Q9P2E9 1410 aaKnown RBP11.04□□□□□ -0.64
SCAPER-205ENST00000562948 EHBP1L1Q8N3D4 1523 aa11.04□□□□□ -0.64
SCAPER-205ENST00000562948 ZNF644Q9H582 1327 aaPredicted RBP11.03□□□□□ -0.64
SCAPER-205ENST00000562948 TRIM26Q12899 539 aaPredicted RBP11.02□□□□□ -0.65
SCAPER-205ENST00000562948 CYB5RLQ6IPT4 315 aa11.02□□□□□ -0.65
SCAPER-205ENST00000562948 GPATCH8Q9UKJ3 1502 aaKnown RBP11□□□□□ -0.65
SCAPER-205ENST00000562948 TROQ12816 1431 aaPredicted RBP11□□□□□ -0.65
SCAPER-205ENST00000562948 MTUS2Q5JR59 1369 aa10.99□□□□□ -0.65
SCAPER-205ENST00000562948 PTPN23Q9H3S7 1636 aa10.98□□□□□ -0.65
SCAPER-205ENST00000562948 KDM6BO15054 1643 aa10.98□□□□□ -0.65
SCAPER-205ENST00000562948 FGD6Q6ZV73 1430 aa10.98□□□□□ -0.65
SCAPER-205ENST00000562948 KIF13AQ9H1H9 1805 aa10.97□□□□□ -0.65
SCAPER-205ENST00000562948 ASXL2Q76L83 1435 aa10.97□□□□□ -0.65
SCAPER-205ENST00000562948 SAMD9LQ8IVG5 1584 aa10.96□□□□□ -0.65
SCAPER-205ENST00000562948 ARHGEF12Q9NZN5 1544 aa10.96□□□□□ -0.65
SCAPER-205ENST00000562948 MYOM3Q5VTT5 1437 aa10.96□□□□□ -0.65
SCAPER-205ENST00000562948 PREX2Q70Z35 1606 aa10.96□□□□□ -0.65
SCAPER-205ENST00000562948 PPRC1Q5VV67 1664 aaKnown RBP10.95□□□□□ -0.66
SCAPER-205ENST00000562948 CCNB3Q8WWL7 1395 aa10.94□□□□□ -0.66
SCAPER-205ENST00000562948 WDR7Q9Y4E6 1490 aa10.94□□□□□ -0.66
SCAPER-205ENST00000562948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.94□□□□□ -0.66
SCAPER-205ENST00000562948 HNRNPUL2Q1KMD3 747 aaKnown RBP10.94□□□□□ -0.66
SCAPER-205ENST00000562948 ABCA9Q8IUA7 1624 aa10.93□□□□□ -0.66
SCAPER-205ENST00000562948 MYO5CQ9NQX4 1742 aa10.93□□□□□ -0.66
SCAPER-205ENST00000562948 TCOF1Q13428 1488 aaKnown RBP10.93□□□□□ -0.66
SCAPER-205ENST00000562948 KCNH8Q96L42 1107 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms