RNA–Protein interactions for RNA: ENST00000562890.1

SCAPER-204, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 671 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-204ENST00000562890 ARAP1Q96P48 1450 aa11.52□□□□□ -0.56
SCAPER-204ENST00000562890 POTEDQ86YR6 584 aa11.5□□□□□ -0.57
SCAPER-204ENST00000562890 RUSC2Q8N2Y8 1516 aa11.49□□□□□ -0.57
SCAPER-204ENST00000562890 CUL7Q14999 1698 aa11.49□□□□□ -0.57
SCAPER-204ENST00000562890 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
SCAPER-204ENST00000562890 CARMIL1Q5VZK9 1371 aa11.48□□□□□ -0.57
SCAPER-204ENST00000562890 SHROOM2Q13796 1616 aa11.48□□□□□ -0.57
SCAPER-204ENST00000562890 PPP6R1Q9UPN7 881 aa11.47□□□□□ -0.57
SCAPER-204ENST00000562890 ERCC6L2Q5T890 1561 aa11.46□□□□□ -0.57
SCAPER-204ENST00000562890 ADRA2BP18089 450 aa11.45□□□□□ -0.58
SCAPER-204ENST00000562890 KIAA0586Q9BVV6 1533 aa11.43□□□□□ -0.58
SCAPER-204ENST00000562890 PRG4Q92954 1404 aaPredicted RBP11.41□□□□□ -0.58
SCAPER-204ENST00000562890 RAPGEF2Q9Y4G8 1499 aa11.38□□□□□ -0.59
SCAPER-204ENST00000562890 CSRNP3Q8WYN3 585 aa11.35□□□□□ -0.59
SCAPER-204ENST00000562890 PRXQ9BXM0 1461 aa11.35□□□□□ -0.59
SCAPER-204ENST00000562890 PIAS4Q8N2W9 510 aaPredicted RBP11.34□□□□□ -0.59
SCAPER-204ENST00000562890 IQGAP2Q13576 1575 aa11.32□□□□□ -0.6
SCAPER-204ENST00000562890 TRHP20396 242 aaPredicted RBP11.31□□□□□ -0.6
SCAPER-204ENST00000562890 EEA1Q15075 1411 aa11.29□□□□□ -0.6
SCAPER-204ENST00000562890 UGGT2Q9NYU1 1516 aa11.29□□□□□ -0.6
SCAPER-204ENST00000562890 CARMIL2Q6F5E8 1435 aa11.28□□□□□ -0.6
SCAPER-204ENST00000562890 DISP1Q96F81 1524 aa11.28□□□□□ -0.6
SCAPER-204ENST00000562890 TNIKQ9UKE5 1360 aa11.28□□□□□ -0.6
SCAPER-204ENST00000562890 PTPRGP23470 1445 aa11.27□□□□□ -0.6
SCAPER-204ENST00000562890 CTTNBP2Q8WZ74 1663 aa11.27□□□□□ -0.6
SCAPER-204ENST00000562890 ADCY10Q96PN6 1610 aa11.24□□□□□ -0.61
SCAPER-204ENST00000562890 NPM1P06748 294 aaKnown RBP eCLIP11.24□□□□□ -0.61
SCAPER-204ENST00000562890 FAM9AQ8IZU1 332 aaPredicted RBP11.24□□□□□ -0.61
SCAPER-204ENST00000562890 MSH5O43196 834 aa11.23□□□□□ -0.61
SCAPER-204ENST00000562890 KIAA0556O60303 1618 aa11.21□□□□□ -0.61
SCAPER-204ENST00000562890 TTBK1Q5TCY1 1321 aaPredicted RBP11.21□□□□□ -0.61
SCAPER-204ENST00000562890 UHRF1BP1LA0JNW5 1464 aa11.19□□□□□ -0.62
SCAPER-204ENST00000562890 UACAQ9BZF9 1416 aa11.19□□□□□ -0.62
SCAPER-204ENST00000562890 KIF13AQ9H1H9 1805 aa11.19□□□□□ -0.62
SCAPER-204ENST00000562890 MAPKBP1O60336 1514 aa11.19□□□□□ -0.62
SCAPER-204ENST00000562890 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
SCAPER-204ENST00000562890 KIF21BO75037 1637 aa11.17□□□□□ -0.62
SCAPER-204ENST00000562890 ABCC10Q5T3U5 1492 aa11.17□□□□□ -0.62
SCAPER-204ENST00000562890 ABCC2Q92887 1545 aa11.16□□□□□ -0.62
SCAPER-204ENST00000562890 FAM69CQ0P6D2 419 aa11.15□□□□□ -0.62
SCAPER-204ENST00000562890 P3H3Q8IVL6 736 aa11.15□□□□□ -0.62
SCAPER-204ENST00000562890 KDM5BQ9UGL1 1544 aa11.14□□□□□ -0.63
SCAPER-204ENST00000562890 ABCA8O94911 1581 aa11.13□□□□□ -0.63
SCAPER-204ENST00000562890 SAMD9Q5K651 1589 aa11.13□□□□□ -0.63
SCAPER-204ENST00000562890 PLB1Q6P1J6 1458 aa11.12□□□□□ -0.63
SCAPER-204ENST00000562890 DIP2BQ9P265 1576 aa11.11□□□□□ -0.63
SCAPER-204ENST00000562890 ASXL2Q76L83 1435 aa11.1□□□□□ -0.63
SCAPER-204ENST00000562890 ZCCHC11Q5TAX3 1644 aaKnown RBP11.1□□□□□ -0.63
SCAPER-204ENST00000562890 UBTFP17480 764 aaKnown RBP11.1□□□□□ -0.63
SCAPER-204ENST00000562890 RANGAP1P46060 587 aaPredicted RBP11.08□□□□□ -0.64
SCAPER-204ENST00000562890 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
SCAPER-204ENST00000562890 GLI2P10070 1586 aa11.07□□□□□ -0.64
SCAPER-204ENST00000562890 ATP10BO94823 1461 aa11.06□□□□□ -0.64
SCAPER-204ENST00000562890 TSPOAP1O95153 1857 aa11.06□□□□□ -0.64
SCAPER-204ENST00000562890 EPRSP07814 1512 aaKnown RBP11.05□□□□□ -0.64
SCAPER-204ENST00000562890 FHOD3Q2V2M9 1422 aa11.04□□□□□ -0.64
SCAPER-204ENST00000562890 RAPGEF6Q8TEU7 1601 aa11.04□□□□□ -0.64
SCAPER-204ENST00000562890 EFCAB5A4FU69 1503 aa11.04□□□□□ -0.64
SCAPER-204ENST00000562890 PPRC1Q5VV67 1664 aaKnown RBP11.02□□□□□ -0.64
SCAPER-204ENST00000562890 WDR7Q9Y4E6 1490 aa11.02□□□□□ -0.65
SCAPER-204ENST00000562890 ARHGAP35Q9NRY4 1499 aa11.01□□□□□ -0.65
SCAPER-204ENST00000562890 KCNH8Q96L42 1107 aa11.01□□□□□ -0.65
SCAPER-204ENST00000562890 MAP3K4Q9Y6R4 1608 aa11.01□□□□□ -0.65
SCAPER-204ENST00000562890 ARID3CA6NKF2 412 aa11□□□□□ -0.65
SCAPER-204ENST00000562890 NUP153P49790 1475 aaKnown RBP11□□□□□ -0.65
SCAPER-204ENST00000562890 CFAP43Q8NDM7 1665 aa10.96□□□□□ -0.65
SCAPER-204ENST00000562890 CD109Q6YHK3 1445 aa10.96□□□□□ -0.65
SCAPER-204ENST00000562890 PLEKHD1A6NEE1 506 aa10.96□□□□□ -0.65
SCAPER-204ENST00000562890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.96□□□□□ -0.65
SCAPER-204ENST00000562890 HNRNPUL2Q1KMD3 747 aaKnown RBP10.96□□□□□ -0.65
SCAPER-204ENST00000562890 FMN1Q68DA7 1419 aa10.95□□□□□ -0.66
SCAPER-204ENST00000562890 KDM6BO15054 1643 aa10.95□□□□□ -0.66
SCAPER-204ENST00000562890 MAGI3Q5TCQ9 1506 aa10.94□□□□□ -0.66
SCAPER-204ENST00000562890 COL17A1Q9UMD9 1497 aaPredicted RBP10.94□□□□□ -0.66
SCAPER-204ENST00000562890 TEX14Q8IWB6 1497 aa10.93□□□□□ -0.66
SCAPER-204ENST00000562890 ABCA9Q8IUA7 1624 aa10.93□□□□□ -0.66
SCAPER-204ENST00000562890 LRRIQ1Q96JM4 1722 aa10.91□□□□□ -0.66
SCAPER-204ENST00000562890 LOC105371045A0A1W2PR82 267 aa10.9□□□□□ -0.66
SCAPER-204ENST00000562890 ATP1B4Q9UN42 357 aaPredicted RBP10.9□□□□□ -0.66
SCAPER-204ENST00000562890 CDK13Q14004 1512 aaKnown RBP10.89□□□□□ -0.67
SCAPER-204ENST00000562890 CLIP1P30622 1438 aa10.89□□□□□ -0.67
SCAPER-204ENST00000562890 HECW1Q76N89 1606 aa10.88□□□□□ -0.67
SCAPER-204ENST00000562890 CASKIN1Q8WXD9 1431 aa10.87□□□□□ -0.67
SCAPER-204ENST00000562890 CDK11AQ9UQ88 783 aaPredicted RBP10.87□□□□□ -0.67
SCAPER-204ENST00000562890 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.87□□□□□ -0.67
SCAPER-204ENST00000562890 PHLDB1Q86UU1 1377 aa10.87□□□□□ -0.67
SCAPER-204ENST00000562890 ARAP3Q8WWN8 1544 aa10.86□□□□□ -0.67
SCAPER-204ENST00000562890 NEO1Q92859 1461 aa10.84□□□□□ -0.67
SCAPER-204ENST00000562890 PCF11O94913 1555 aaKnown RBP10.83□□□□□ -0.68
SCAPER-204ENST00000562890 KDM4FA0A1W2PPD8 638 aa10.82□□□□□ -0.68
SCAPER-204ENST00000562890 PLCH2O75038 1416 aa10.82□□□□□ -0.68
SCAPER-204ENST00000562890 TROQ12816 1431 aaPredicted RBP10.82□□□□□ -0.68
SCAPER-204ENST00000562890 CEP162Q5TB80 1403 aa10.82□□□□□ -0.68
SCAPER-204ENST00000562890 TTC37Q6PGP7 1564 aa10.82□□□□□ -0.68
SCAPER-204ENST00000562890 FYCO1Q9BQS8 1478 aa10.81□□□□□ -0.68
SCAPER-204ENST00000562890 RAPGEF3O95398 923 aa10.81□□□□□ -0.68
SCAPER-204ENST00000562890 AKNAQ7Z591 1439 aa10.81□□□□□ -0.68
SCAPER-204ENST00000562890 CCDC18Q5T9S5 1454 aa10.81□□□□□ -0.68
SCAPER-204ENST00000562890 KIF14Q15058 1648 aa10.8□□□□□ -0.68
SCAPER-204ENST00000562890 FANCAO15360 1455 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms