RNA–Protein interactions for RNA: ENST00000562778.1

MAP1LC3B-203, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 4

Gene MAP1LC3B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-203ENST00000562778 PRG4Q92954 1404 aaPredicted RBP32.45■■■□□ 2.79
MAP1LC3B-203ENST00000562778 JPH4Q96JJ6 628 aa32.45■■■□□ 2.79
MAP1LC3B-203ENST00000562778 CARMIL1Q5VZK9 1371 aa32.4■■■□□ 2.78
MAP1LC3B-203ENST00000562778 KIAA0586Q9BVV6 1533 aa32.33■■■□□ 2.77
MAP1LC3B-203ENST00000562778 RAPGEF2Q9Y4G8 1499 aa32.13■■■□□ 2.73
MAP1LC3B-203ENST00000562778 IQGAP2Q13576 1575 aa32.09■■■□□ 2.73
MAP1LC3B-203ENST00000562778 TTBK1Q5TCY1 1321 aaPredicted RBP32.04■■■□□ 2.72
MAP1LC3B-203ENST00000562778 ADCY10Q96PN6 1610 aa32.02■■■□□ 2.72
MAP1LC3B-203ENST00000562778 PTPRGP23470 1445 aa31.98■■■□□ 2.71
MAP1LC3B-203ENST00000562778 CARMIL2Q6F5E8 1435 aa31.98■■■□□ 2.71
MAP1LC3B-203ENST00000562778 DISP1Q96F81 1524 aa31.94■■■□□ 2.7
MAP1LC3B-203ENST00000562778 TNIKQ9UKE5 1360 aa31.94■■■□□ 2.7
MAP1LC3B-203ENST00000562778 NPM1P06748 294 aaKnown RBP eCLIP31.93■■■□□ 2.7
MAP1LC3B-203ENST00000562778 PRXQ9BXM0 1461 aa31.92■■■□□ 2.7
MAP1LC3B-203ENST00000562778 UGGT2Q9NYU1 1516 aa31.9■■■□□ 2.7
MAP1LC3B-203ENST00000562778 KIF13AQ9H1H9 1805 aa31.89■■■□□ 2.7
MAP1LC3B-203ENST00000562778 CTTNBP2Q8WZ74 1663 aa31.86■■■□□ 2.69
MAP1LC3B-203ENST00000562778 MAPKBP1O60336 1514 aa31.85■■■□□ 2.69
MAP1LC3B-203ENST00000562778 KIAA0556O60303 1618 aa31.82■■■□□ 2.68
MAP1LC3B-203ENST00000562778 CSRNP3Q8WYN3 585 aa31.79■■■□□ 2.68
MAP1LC3B-203ENST00000562778 ABCC10Q5T3U5 1492 aa31.78■■■□□ 2.68
MAP1LC3B-203ENST00000562778 FAM69CQ0P6D2 419 aa31.78■■■□□ 2.68
MAP1LC3B-203ENST00000562778 DIP2BQ9P265 1576 aa31.74■■■□□ 2.67
MAP1LC3B-203ENST00000562778 ABCC2Q92887 1545 aa31.74■■■□□ 2.67
MAP1LC3B-203ENST00000562778 UACAQ9BZF9 1416 aa31.74■■■□□ 2.67
MAP1LC3B-203ENST00000562778 UHRF1BP1LA0JNW5 1464 aa31.71■■■□□ 2.67
MAP1LC3B-203ENST00000562778 FAM9AQ8IZU1 332 aaPredicted RBP31.7■■■□□ 2.67
MAP1LC3B-203ENST00000562778 EEA1Q15075 1411 aa31.65■■■□□ 2.66
MAP1LC3B-203ENST00000562778 GOLGA3Q08378 1498 aa31.64■■■□□ 2.66
MAP1LC3B-203ENST00000562778 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
MAP1LC3B-203ENST00000562778 ASXL2Q76L83 1435 aa31.61■■■□□ 2.65
MAP1LC3B-203ENST00000562778 PLB1Q6P1J6 1458 aa31.59■■■□□ 2.65
MAP1LC3B-203ENST00000562778 KDM5BQ9UGL1 1544 aa31.58■■■□□ 2.65
MAP1LC3B-203ENST00000562778 TSPOAP1O95153 1857 aa31.55■■■□□ 2.64
MAP1LC3B-203ENST00000562778 P3H3Q8IVL6 736 aa31.55■■■□□ 2.64
MAP1LC3B-203ENST00000562778 ZCCHC11Q5TAX3 1644 aaKnown RBP31.54■■■□□ 2.64
MAP1LC3B-203ENST00000562778 ABCA8O94911 1581 aa31.49■■■□□ 2.63
MAP1LC3B-203ENST00000562778 RANGAP1P46060 587 aaPredicted RBP31.46■■■□□ 2.63
MAP1LC3B-203ENST00000562778 GLI2P10070 1586 aa31.43■■■□□ 2.62
MAP1LC3B-203ENST00000562778 SAMD9Q5K651 1589 aa31.43■■■□□ 2.62
MAP1LC3B-203ENST00000562778 KIF21BO75037 1637 aa31.42■■■□□ 2.62
MAP1LC3B-203ENST00000562778 EPRSP07814 1512 aaKnown RBP31.41■■■□□ 2.62
MAP1LC3B-203ENST00000562778 EHMT2Q96KQ7 1210 aa31.4■■■□□ 2.62
MAP1LC3B-203ENST00000562778 PPRC1Q5VV67 1664 aaKnown RBP31.36■■■□□ 2.61
MAP1LC3B-203ENST00000562778 ARID3CA6NKF2 412 aa31.36■■■□□ 2.61
MAP1LC3B-203ENST00000562778 WDR7Q9Y4E6 1490 aa31.35■■■□□ 2.61
MAP1LC3B-203ENST00000562778 KDM6BO15054 1643 aa31.35■■■□□ 2.61
MAP1LC3B-203ENST00000562778 MAP3K4Q9Y6R4 1608 aa31.3■■■□□ 2.6
MAP1LC3B-203ENST00000562778 FHOD3Q2V2M9 1422 aa31.29■■■□□ 2.6
MAP1LC3B-203ENST00000562778 KCNH8Q96L42 1107 aa31.26■■■□□ 2.59
MAP1LC3B-203ENST00000562778 ATP10BO94823 1461 aa31.25■■■□□ 2.59
MAP1LC3B-203ENST00000562778 RAPGEF6Q8TEU7 1601 aa31.23■■■□□ 2.59
MAP1LC3B-203ENST00000562778 UBTFP17480 764 aaKnown RBP31.22■■■□□ 2.59
MAP1LC3B-203ENST00000562778 EFCAB5A4FU69 1503 aa31.16■■■□□ 2.58
MAP1LC3B-203ENST00000562778 AEBP2Q6ZN18 517 aaPredicted RBP31.16■■■□□ 2.58
MAP1LC3B-203ENST00000562778 NUP153P49790 1475 aaKnown RBP31.14■■■□□ 2.58
MAP1LC3B-203ENST00000562778 COL17A1Q9UMD9 1497 aaPredicted RBP31.14■■■□□ 2.58
MAP1LC3B-203ENST00000562778 TEX14Q8IWB6 1497 aa31.14■■■□□ 2.57
MAP1LC3B-203ENST00000562778 CD109Q6YHK3 1445 aa31.13■■■□□ 2.57
MAP1LC3B-203ENST00000562778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.11■■■□□ 2.57
MAP1LC3B-203ENST00000562778 HNRNPUL2Q1KMD3 747 aaKnown RBP31.11■■■□□ 2.57
MAP1LC3B-203ENST00000562778 CFAP43Q8NDM7 1665 aa31.11■■■□□ 2.57
MAP1LC3B-203ENST00000562778 MAGI3Q5TCQ9 1506 aa31.05■■■□□ 2.56
MAP1LC3B-203ENST00000562778 ARHGAP35Q9NRY4 1499 aa31.02■■■□□ 2.56
MAP1LC3B-203ENST00000562778 ABCA9Q8IUA7 1624 aa30.97■■■□□ 2.55
MAP1LC3B-203ENST00000562778 CDK13Q14004 1512 aaKnown RBP30.92■■■□□ 2.54
MAP1LC3B-203ENST00000562778 KDM4FA0A1W2PPD8 638 aa30.91■■■□□ 2.54
MAP1LC3B-203ENST00000562778 PLEKHD1A6NEE1 506 aa30.9■■■□□ 2.54
MAP1LC3B-203ENST00000562778 ATP1B4Q9UN42 357 aaPredicted RBP30.9■■■□□ 2.54
MAP1LC3B-203ENST00000562778 FMN1Q68DA7 1419 aa30.88■■■□□ 2.53
MAP1LC3B-203ENST00000562778 HECW1Q76N89 1606 aa30.82■■■□□ 2.52
MAP1LC3B-203ENST00000562778 ARAP3Q8WWN8 1544 aa30.8■■■□□ 2.52
MAP1LC3B-203ENST00000562778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.78■■■□□ 2.52
MAP1LC3B-203ENST00000562778 TTC37Q6PGP7 1564 aa30.75■■■□□ 2.51
MAP1LC3B-203ENST00000562778 ADGRL1O94910 1474 aa30.74■■■□□ 2.51
MAP1LC3B-203ENST00000562778 NEO1Q92859 1461 aa30.74■■■□□ 2.51
MAP1LC3B-203ENST00000562778 PHLDB1Q86UU1 1377 aa30.72■■■□□ 2.51
MAP1LC3B-203ENST00000562778 RAPGEF3O95398 923 aa30.72■■■□□ 2.51
MAP1LC3B-203ENST00000562778 LRRIQ1Q96JM4 1722 aa30.71■■■□□ 2.51
MAP1LC3B-203ENST00000562778 PCF11O94913 1555 aaKnown RBP30.67■■■□□ 2.5
MAP1LC3B-203ENST00000562778 CLIP1P30622 1438 aa30.66■■■□□ 2.5
MAP1LC3B-203ENST00000562778 FANCAO15360 1455 aa30.64■■■□□ 2.5
MAP1LC3B-203ENST00000562778 FRMPD1Q5SYB0 1578 aa30.63■■■□□ 2.49
MAP1LC3B-203ENST00000562778 CASKIN1Q8WXD9 1431 aa30.63■■■□□ 2.49
MAP1LC3B-203ENST00000562778 CDK11AQ9UQ88 783 aaPredicted RBP30.62■■■□□ 2.49
MAP1LC3B-203ENST00000562778 AKNAQ7Z591 1439 aa30.62■■■□□ 2.49
MAP1LC3B-203ENST00000562778 KIF14Q15058 1648 aa30.61■■■□□ 2.49
MAP1LC3B-203ENST00000562778 TROQ12816 1431 aaPredicted RBP30.58■■■□□ 2.49
MAP1LC3B-203ENST00000562778 CFAP74Q9C0B2 1584 aa30.57■■■□□ 2.48
MAP1LC3B-203ENST00000562778 PLCH2O75038 1416 aa30.56■■■□□ 2.48
MAP1LC3B-203ENST00000562778 DENND4BO75064 1496 aaPredicted RBP30.56■■■□□ 2.48
MAP1LC3B-203ENST00000562778 RICTORQ6R327 1708 aa30.53■■■□□ 2.48
MAP1LC3B-203ENST00000562778 CCDC18Q5T9S5 1454 aa30.51■■■□□ 2.48
MAP1LC3B-203ENST00000562778 MYO5CQ9NQX4 1742 aa30.51■■■□□ 2.47
MAP1LC3B-203ENST00000562778 FYCO1Q9BQS8 1478 aa30.5■■■□□ 2.47
MAP1LC3B-203ENST00000562778 SCAPERQ9BY12 1400 aa30.46■■■□□ 2.47
MAP1LC3B-203ENST00000562778 EFCAB2Q5VUJ9 269 aa30.44■■■□□ 2.46
MAP1LC3B-203ENST00000562778 CEP162Q5TB80 1403 aa30.42■■■□□ 2.46
MAP1LC3B-203ENST00000562778 ARHGAP5Q13017 1502 aa30.41■■■□□ 2.46
MAP1LC3B-203ENST00000562778 ARHGEF40Q8TER5 1519 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms