RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 KIAA0586Q9BVV6 1533 aa27.27■■□□□ 1.96
COMMD4-206ENST00000562610 RAPGEF2Q9Y4G8 1499 aa27.26■■□□□ 1.95
COMMD4-206ENST00000562610 PRG4Q92954 1404 aaPredicted RBP27.25■■□□□ 1.95
COMMD4-206ENST00000562610 CTTNBP2Q8WZ74 1663 aa27.22■■□□□ 1.95
COMMD4-206ENST00000562610 IQGAP2Q13576 1575 aa27.22■■□□□ 1.95
COMMD4-206ENST00000562610 JPH4Q96JJ6 628 aa27.21■■□□□ 1.95
COMMD4-206ENST00000562610 PRXQ9BXM0 1461 aa27.11■■□□□ 1.93
COMMD4-206ENST00000562610 EEA1Q15075 1411 aa27.08■■□□□ 1.93
COMMD4-206ENST00000562610 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
COMMD4-206ENST00000562610 CARMIL2Q6F5E8 1435 aa27.01■■□□□ 1.91
COMMD4-206ENST00000562610 CSRNP3Q8WYN3 585 aa27■■□□□ 1.91
COMMD4-206ENST00000562610 UGGT2Q9NYU1 1516 aa27■■□□□ 1.91
COMMD4-206ENST00000562610 KIAA0556O60303 1618 aa26.98■■□□□ 1.91
COMMD4-206ENST00000562610 FAM9AQ8IZU1 332 aaPredicted RBP26.96■■□□□ 1.91
COMMD4-206ENST00000562610 DISP1Q96F81 1524 aa26.95■■□□□ 1.91
COMMD4-206ENST00000562610 ADCY10Q96PN6 1610 aa26.95■■□□□ 1.91
COMMD4-206ENST00000562610 TRHP20396 242 aaPredicted RBP26.93■■□□□ 1.9
COMMD4-206ENST00000562610 KIF21BO75037 1637 aa26.92■■□□□ 1.9
COMMD4-206ENST00000562610 TNIKQ9UKE5 1360 aa26.9■■□□□ 1.9
COMMD4-206ENST00000562610 TTBK1Q5TCY1 1321 aaPredicted RBP26.9■■□□□ 1.9
COMMD4-206ENST00000562610 PTPRGP23470 1445 aa26.88■■□□□ 1.89
COMMD4-206ENST00000562610 GOLGA3Q08378 1498 aa26.84■■□□□ 1.89
COMMD4-206ENST00000562610 KIF13AQ9H1H9 1805 aa26.79■■□□□ 1.88
COMMD4-206ENST00000562610 MAPKBP1O60336 1514 aa26.75■■□□□ 1.87
COMMD4-206ENST00000562610 NPM1P06748 294 aaKnown RBP eCLIP26.75■■□□□ 1.87
COMMD4-206ENST00000562610 ABCC2Q92887 1545 aa26.75■■□□□ 1.87
COMMD4-206ENST00000562610 SAMD9Q5K651 1589 aa26.74■■□□□ 1.87
COMMD4-206ENST00000562610 UACAQ9BZF9 1416 aa26.72■■□□□ 1.87
COMMD4-206ENST00000562610 UHRF1BP1LA0JNW5 1464 aa26.7■■□□□ 1.87
COMMD4-206ENST00000562610 EHMT2Q96KQ7 1210 aa26.67■■□□□ 1.86
COMMD4-206ENST00000562610 ZCCHC11Q5TAX3 1644 aaKnown RBP26.67■■□□□ 1.86
COMMD4-206ENST00000562610 DIP2BQ9P265 1576 aa26.66■■□□□ 1.86
COMMD4-206ENST00000562610 PLB1Q6P1J6 1458 aa26.63■■□□□ 1.85
COMMD4-206ENST00000562610 ABCA8O94911 1581 aa26.63■■□□□ 1.85
COMMD4-206ENST00000562610 RANGAP1P46060 587 aaPredicted RBP26.62■■□□□ 1.85
COMMD4-206ENST00000562610 ABCC10Q5T3U5 1492 aa26.61■■□□□ 1.85
COMMD4-206ENST00000562610 P3H3Q8IVL6 736 aa26.6■■□□□ 1.85
COMMD4-206ENST00000562610 EFCAB5A4FU69 1503 aa26.59■■□□□ 1.85
COMMD4-206ENST00000562610 KDM5BQ9UGL1 1544 aa26.59■■□□□ 1.85
COMMD4-206ENST00000562610 UBTFP17480 764 aaKnown RBP26.57■■□□□ 1.84
COMMD4-206ENST00000562610 TSPOAP1O95153 1857 aa26.55■■□□□ 1.84
COMMD4-206ENST00000562610 ASXL2Q76L83 1435 aa26.54■■□□□ 1.84
COMMD4-206ENST00000562610 RAPGEF6Q8TEU7 1601 aa26.54■■□□□ 1.84
COMMD4-206ENST00000562610 FHOD3Q2V2M9 1422 aa26.52■■□□□ 1.84
COMMD4-206ENST00000562610 FAM69CQ0P6D2 419 aa26.51■■□□□ 1.83
COMMD4-206ENST00000562610 GLI2P10070 1586 aa26.42■■□□□ 1.82
COMMD4-206ENST00000562610 WDR7Q9Y4E6 1490 aa26.42■■□□□ 1.82
COMMD4-206ENST00000562610 EPRSP07814 1512 aaKnown RBP26.39■■□□□ 1.82
COMMD4-206ENST00000562610 ARHGAP35Q9NRY4 1499 aa26.38■■□□□ 1.81
COMMD4-206ENST00000562610 MAP3K4Q9Y6R4 1608 aa26.37■■□□□ 1.81
COMMD4-206ENST00000562610 ARID3CA6NKF2 412 aa26.37■■□□□ 1.81
COMMD4-206ENST00000562610 PPRC1Q5VV67 1664 aaKnown RBP26.36■■□□□ 1.81
COMMD4-206ENST00000562610 ATP10BO94823 1461 aa26.34■■□□□ 1.81
COMMD4-206ENST00000562610 NUP153P49790 1475 aaKnown RBP26.34■■□□□ 1.81
COMMD4-206ENST00000562610 CFAP43Q8NDM7 1665 aa26.31■■□□□ 1.8
COMMD4-206ENST00000562610 HECW1Q76N89 1606 aa26.29■■□□□ 1.8
COMMD4-206ENST00000562610 KDM6BO15054 1643 aa26.28■■□□□ 1.8
COMMD4-206ENST00000562610 FMN1Q68DA7 1419 aa26.28■■□□□ 1.8
COMMD4-206ENST00000562610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.25■■□□□ 1.79
COMMD4-206ENST00000562610 HNRNPUL2Q1KMD3 747 aaKnown RBP26.25■■□□□ 1.79
COMMD4-206ENST00000562610 KCNH8Q96L42 1107 aa26.22■■□□□ 1.79
COMMD4-206ENST00000562610 CDK13Q14004 1512 aaKnown RBP26.2■■□□□ 1.79
COMMD4-206ENST00000562610 LRRIQ1Q96JM4 1722 aa26.2■■□□□ 1.79
COMMD4-206ENST00000562610 TEX14Q8IWB6 1497 aa26.19■■□□□ 1.78
COMMD4-206ENST00000562610 CLIP1P30622 1438 aa26.19■■□□□ 1.78
COMMD4-206ENST00000562610 PCF11O94913 1555 aaKnown RBP26.19■■□□□ 1.78
COMMD4-206ENST00000562610 ABCA9Q8IUA7 1624 aa26.18■■□□□ 1.78
COMMD4-206ENST00000562610 ATP1B4Q9UN42 357 aaPredicted RBP26.14■■□□□ 1.78
COMMD4-206ENST00000562610 CD109Q6YHK3 1445 aa26.14■■□□□ 1.77
COMMD4-206ENST00000562610 MAGI3Q5TCQ9 1506 aa26.1■■□□□ 1.77
COMMD4-206ENST00000562610 PLEKHD1A6NEE1 506 aa26.06■■□□□ 1.76
COMMD4-206ENST00000562610 CEP162Q5TB80 1403 aa26.05■■□□□ 1.76
COMMD4-206ENST00000562610 CASKIN1Q8WXD9 1431 aa26.05■■□□□ 1.76
COMMD4-206ENST00000562610 TTC37Q6PGP7 1564 aa26.04■■□□□ 1.76
COMMD4-206ENST00000562610 FYCO1Q9BQS8 1478 aa26.04■■□□□ 1.76
COMMD4-206ENST00000562610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.02■■□□□ 1.76
COMMD4-206ENST00000562610 CCDC18Q5T9S5 1454 aa26.01■■□□□ 1.75
COMMD4-206ENST00000562610 KIF14Q15058 1648 aa25.99■■□□□ 1.75
COMMD4-206ENST00000562610 MYO5CQ9NQX4 1742 aa25.98■■□□□ 1.75
COMMD4-206ENST00000562610 COL17A1Q9UMD9 1497 aaPredicted RBP25.98■■□□□ 1.75
COMMD4-206ENST00000562610 CFAP74Q9C0B2 1584 aa25.96■■□□□ 1.75
COMMD4-206ENST00000562610 LOC105371045A0A1W2PR82 267 aa25.96■■□□□ 1.75
COMMD4-206ENST00000562610 CDK11AQ9UQ88 783 aaPredicted RBP25.94■■□□□ 1.74
COMMD4-206ENST00000562610 TROQ12816 1431 aaPredicted RBP25.91■■□□□ 1.74
COMMD4-206ENST00000562610 NEO1Q92859 1461 aa25.91■■□□□ 1.74
COMMD4-206ENST00000562610 ARAP3Q8WWN8 1544 aa25.88■■□□□ 1.73
COMMD4-206ENST00000562610 FANCAO15360 1455 aa25.85■■□□□ 1.73
COMMD4-206ENST00000562610 PHLDB1Q86UU1 1377 aa25.84■■□□□ 1.73
COMMD4-206ENST00000562610 RICTORQ6R327 1708 aa25.81■■□□□ 1.72
COMMD4-206ENST00000562610 FRMPD1Q5SYB0 1578 aa25.81■■□□□ 1.72
COMMD4-206ENST00000562610 CDC42BPBQ9Y5S2 1711 aa25.8■■□□□ 1.72
COMMD4-206ENST00000562610 PREX2Q70Z35 1606 aa25.8■■□□□ 1.72
COMMD4-206ENST00000562610 CDC42BPAQ5VT25 1732 aa25.79■■□□□ 1.72
COMMD4-206ENST00000562610 PLCH2O75038 1416 aa25.78■■□□□ 1.72
COMMD4-206ENST00000562610 AKNAQ7Z591 1439 aa25.77■■□□□ 1.72
COMMD4-206ENST00000562610 ARHGAP5Q13017 1502 aa25.77■■□□□ 1.72
COMMD4-206ENST00000562610 VPS8Q8N3P4 1428 aa25.74■■□□□ 1.71
COMMD4-206ENST00000562610 EHBP1L1Q8N3D4 1523 aa25.73■■□□□ 1.71
COMMD4-206ENST00000562610 DENND4BO75064 1496 aaPredicted RBP25.72■■□□□ 1.71
COMMD4-206ENST00000562610 ADGRL1O94910 1474 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms