RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 JPH4Q96JJ6 628 aa32.84■■■□□ 2.85
TMEM249-202ENST00000562477 PRG4Q92954 1404 aaPredicted RBP32.8■■■□□ 2.84
TMEM249-202ENST00000562477 KIAA0586Q9BVV6 1533 aa32.77■■■□□ 2.84
TMEM249-202ENST00000562477 RAPGEF2Q9Y4G8 1499 aa32.72■■■□□ 2.83
TMEM249-202ENST00000562477 CHIC1Q5VXU3 224 aa32.59■■■□□ 2.81
TMEM249-202ENST00000562477 PRXQ9BXM0 1461 aa32.58■■■□□ 2.81
TMEM249-202ENST00000562477 IQGAP2Q13576 1575 aa32.56■■■□□ 2.8
TMEM249-202ENST00000562477 CSRNP3Q8WYN3 585 aa32.51■■■□□ 2.79
TMEM249-202ENST00000562477 TRHP20396 242 aaPredicted RBP32.5■■■□□ 2.79
TMEM249-202ENST00000562477 FAM9AQ8IZU1 332 aaPredicted RBP32.46■■■□□ 2.79
TMEM249-202ENST00000562477 EEA1Q15075 1411 aa32.43■■■□□ 2.78
TMEM249-202ENST00000562477 CARMIL2Q6F5E8 1435 aa32.42■■■□□ 2.78
TMEM249-202ENST00000562477 TTBK1Q5TCY1 1321 aaPredicted RBP32.41■■■□□ 2.78
TMEM249-202ENST00000562477 DISP1Q96F81 1524 aa32.4■■■□□ 2.78
TMEM249-202ENST00000562477 UGGT2Q9NYU1 1516 aa32.39■■■□□ 2.78
TMEM249-202ENST00000562477 PTPRGP23470 1445 aa32.37■■■□□ 2.77
TMEM249-202ENST00000562477 TNIKQ9UKE5 1360 aa32.36■■■□□ 2.77
TMEM249-202ENST00000562477 CTTNBP2Q8WZ74 1663 aa32.34■■■□□ 2.77
TMEM249-202ENST00000562477 ADCY10Q96PN6 1610 aa32.32■■■□□ 2.76
TMEM249-202ENST00000562477 KIAA0556O60303 1618 aa32.26■■■□□ 2.76
TMEM249-202ENST00000562477 NPM1P06748 294 aaKnown RBP eCLIP32.2■■■□□ 2.75
TMEM249-202ENST00000562477 GOLGA3Q08378 1498 aa32.15■■■□□ 2.74
TMEM249-202ENST00000562477 UACAQ9BZF9 1416 aa32.14■■■□□ 2.74
TMEM249-202ENST00000562477 KIF21BO75037 1637 aa32.13■■■□□ 2.73
TMEM249-202ENST00000562477 EHMT2Q96KQ7 1210 aa32.12■■■□□ 2.73
TMEM249-202ENST00000562477 MAPKBP1O60336 1514 aa32.09■■■□□ 2.73
TMEM249-202ENST00000562477 ABCC2Q92887 1545 aa32.09■■■□□ 2.73
TMEM249-202ENST00000562477 UHRF1BP1LA0JNW5 1464 aa32.09■■■□□ 2.73
TMEM249-202ENST00000562477 P3H3Q8IVL6 736 aa32.08■■■□□ 2.73
TMEM249-202ENST00000562477 RANGAP1P46060 587 aaPredicted RBP32.05■■■□□ 2.72
TMEM249-202ENST00000562477 PLB1Q6P1J6 1458 aa32.03■■■□□ 2.72
TMEM249-202ENST00000562477 ABCC10Q5T3U5 1492 aa32.01■■■□□ 2.71
TMEM249-202ENST00000562477 KIF13AQ9H1H9 1805 aa32■■■□□ 2.71
TMEM249-202ENST00000562477 FAM69CQ0P6D2 419 aa32■■■□□ 2.71
TMEM249-202ENST00000562477 SAMD9Q5K651 1589 aa31.98■■■□□ 2.71
TMEM249-202ENST00000562477 KDM5BQ9UGL1 1544 aa31.95■■■□□ 2.7
TMEM249-202ENST00000562477 DIP2BQ9P265 1576 aa31.94■■■□□ 2.7
TMEM249-202ENST00000562477 ABCA8O94911 1581 aa31.94■■■□□ 2.7
TMEM249-202ENST00000562477 ASXL2Q76L83 1435 aa31.93■■■□□ 2.7
TMEM249-202ENST00000562477 UBTFP17480 764 aaKnown RBP31.93■■■□□ 2.7
TMEM249-202ENST00000562477 ZCCHC11Q5TAX3 1644 aaKnown RBP31.89■■■□□ 2.7
TMEM249-202ENST00000562477 FHOD3Q2V2M9 1422 aa31.87■■■□□ 2.69
TMEM249-202ENST00000562477 ARID3CA6NKF2 412 aa31.81■■■□□ 2.68
TMEM249-202ENST00000562477 EFCAB5A4FU69 1503 aa31.76■■■□□ 2.68
TMEM249-202ENST00000562477 EPRSP07814 1512 aaKnown RBP31.74■■■□□ 2.67
TMEM249-202ENST00000562477 WDR7Q9Y4E6 1490 aa31.72■■■□□ 2.67
TMEM249-202ENST00000562477 ATP10BO94823 1461 aa31.71■■■□□ 2.67
TMEM249-202ENST00000562477 RAPGEF6Q8TEU7 1601 aa31.71■■■□□ 2.67
TMEM249-202ENST00000562477 TSPOAP1O95153 1857 aa31.7■■■□□ 2.67
TMEM249-202ENST00000562477 GLI2P10070 1586 aa31.7■■■□□ 2.67
TMEM249-202ENST00000562477 ARHGAP35Q9NRY4 1499 aa31.66■■■□□ 2.66
TMEM249-202ENST00000562477 NUP153P49790 1475 aaKnown RBP31.65■■■□□ 2.66
TMEM249-202ENST00000562477 KCNH8Q96L42 1107 aa31.63■■■□□ 2.65
TMEM249-202ENST00000562477 PPRC1Q5VV67 1664 aaKnown RBP31.57■■■□□ 2.65
TMEM249-202ENST00000562477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.56■■■□□ 2.64
TMEM249-202ENST00000562477 HNRNPUL2Q1KMD3 747 aaKnown RBP31.56■■■□□ 2.64
TMEM249-202ENST00000562477 MAP3K4Q9Y6R4 1608 aa31.55■■■□□ 2.64
TMEM249-202ENST00000562477 FMN1Q68DA7 1419 aa31.49■■■□□ 2.63
TMEM249-202ENST00000562477 KDM6BO15054 1643 aa31.46■■■□□ 2.63
TMEM249-202ENST00000562477 CD109Q6YHK3 1445 aa31.46■■■□□ 2.63
TMEM249-202ENST00000562477 ATP1B4Q9UN42 357 aaPredicted RBP31.44■■■□□ 2.62
TMEM249-202ENST00000562477 CDK13Q14004 1512 aaKnown RBP31.44■■■□□ 2.62
TMEM249-202ENST00000562477 CLIP1P30622 1438 aa31.41■■■□□ 2.62
TMEM249-202ENST00000562477 TEX14Q8IWB6 1497 aa31.4■■■□□ 2.62
TMEM249-202ENST00000562477 CFAP43Q8NDM7 1665 aa31.4■■■□□ 2.62
TMEM249-202ENST00000562477 COL17A1Q9UMD9 1497 aaPredicted RBP31.38■■■□□ 2.61
TMEM249-202ENST00000562477 PLEKHD1A6NEE1 506 aa31.37■■■□□ 2.61
TMEM249-202ENST00000562477 MAGI3Q5TCQ9 1506 aa31.37■■■□□ 2.61
TMEM249-202ENST00000562477 HECW1Q76N89 1606 aa31.36■■■□□ 2.61
TMEM249-202ENST00000562477 ABCA9Q8IUA7 1624 aa31.33■■■□□ 2.61
TMEM249-202ENST00000562477 LOC105371045A0A1W2PR82 267 aa31.31■■■□□ 2.6
TMEM249-202ENST00000562477 PCF11O94913 1555 aaKnown RBP31.28■■■□□ 2.6
TMEM249-202ENST00000562477 CASKIN1Q8WXD9 1431 aa31.25■■■□□ 2.59
TMEM249-202ENST00000562477 CEP162Q5TB80 1403 aa31.24■■■□□ 2.59
TMEM249-202ENST00000562477 LRRIQ1Q96JM4 1722 aa31.22■■■□□ 2.59
TMEM249-202ENST00000562477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.2■■■□□ 2.59
TMEM249-202ENST00000562477 TTC37Q6PGP7 1564 aa31.17■■■□□ 2.58
TMEM249-202ENST00000562477 FYCO1Q9BQS8 1478 aa31.15■■■□□ 2.58
TMEM249-202ENST00000562477 CDK11AQ9UQ88 783 aaPredicted RBP31.15■■■□□ 2.58
TMEM249-202ENST00000562477 TROQ12816 1431 aaPredicted RBP31.13■■■□□ 2.57
TMEM249-202ENST00000562477 CCDC18Q5T9S5 1454 aa31.1■■■□□ 2.57
TMEM249-202ENST00000562477 ARAP3Q8WWN8 1544 aa31.09■■■□□ 2.57
TMEM249-202ENST00000562477 NEO1Q92859 1461 aa31.09■■■□□ 2.57
TMEM249-202ENST00000562477 KIF14Q15058 1648 aa31.09■■■□□ 2.57
TMEM249-202ENST00000562477 PHLDB1Q86UU1 1377 aa31.06■■■□□ 2.56
TMEM249-202ENST00000562477 FANCAO15360 1455 aa31.03■■■□□ 2.56
TMEM249-202ENST00000562477 RAPGEF3O95398 923 aa31.03■■■□□ 2.56
TMEM249-202ENST00000562477 PLCH2O75038 1416 aa31■■■□□ 2.55
TMEM249-202ENST00000562477 AKNAQ7Z591 1439 aa31■■■□□ 2.55
TMEM249-202ENST00000562477 AEBP2Q6ZN18 517 aaPredicted RBP30.96■■■□□ 2.55
TMEM249-202ENST00000562477 KDM4FA0A1W2PPD8 638 aa30.94■■■□□ 2.54
TMEM249-202ENST00000562477 FRMPD1Q5SYB0 1578 aa30.94■■■□□ 2.54
TMEM249-202ENST00000562477 CFAP74Q9C0B2 1584 aa30.92■■■□□ 2.54
TMEM249-202ENST00000562477 MYO5CQ9NQX4 1742 aa30.92■■■□□ 2.54
TMEM249-202ENST00000562477 DENND4BO75064 1496 aaPredicted RBP30.91■■■□□ 2.54
TMEM249-202ENST00000562477 EFCAB2Q5VUJ9 269 aa30.88■■■□□ 2.53
TMEM249-202ENST00000562477 ADGRL1O94910 1474 aa30.87■■■□□ 2.53
TMEM249-202ENST00000562477 ARHGAP5Q13017 1502 aa30.86■■■□□ 2.53
TMEM249-202ENST00000562477 SCAPERQ9BY12 1400 aa30.85■■■□□ 2.53
TMEM249-202ENST00000562477 RICTORQ6R327 1708 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms