RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 CARMIL1Q5VZK9 1371 aa16.18■□□□□ 0.18
NSMCE1-203ENST00000562039 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
NSMCE1-203ENST00000562039 CUL7Q14999 1698 aa16.17■□□□□ 0.18
NSMCE1-203ENST00000562039 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
NSMCE1-203ENST00000562039 KIAA0586Q9BVV6 1533 aa16.09■□□□□ 0.17
NSMCE1-203ENST00000562039 RAPGEF2Q9Y4G8 1499 aa16.03■□□□□ 0.16
NSMCE1-203ENST00000562039 FAM9AQ8IZU1 332 aaPredicted RBP16.01■□□□□ 0.15
NSMCE1-203ENST00000562039 IQGAP2Q13576 1575 aa15.99■□□□□ 0.15
NSMCE1-203ENST00000562039 PTPRGP23470 1445 aa15.96■□□□□ 0.15
NSMCE1-203ENST00000562039 NPM1P06748 294 aaKnown RBP eCLIP15.96■□□□□ 0.15
NSMCE1-203ENST00000562039 CARMIL2Q6F5E8 1435 aa15.94■□□□□ 0.14
NSMCE1-203ENST00000562039 ADCY10Q96PN6 1610 aa15.94■□□□□ 0.14
NSMCE1-203ENST00000562039 TNIKQ9UKE5 1360 aa15.93■□□□□ 0.14
NSMCE1-203ENST00000562039 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
NSMCE1-203ENST00000562039 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
NSMCE1-203ENST00000562039 DISP1Q96F81 1524 aa15.92■□□□□ 0.14
NSMCE1-203ENST00000562039 PRXQ9BXM0 1461 aa15.91■□□□□ 0.14
NSMCE1-203ENST00000562039 RANGAP1P46060 587 aaPredicted RBP15.9■□□□□ 0.14
NSMCE1-203ENST00000562039 CHIC1Q5VXU3 224 aa15.89■□□□□ 0.13
NSMCE1-203ENST00000562039 FAM69CQ0P6D2 419 aa15.88■□□□□ 0.13
NSMCE1-203ENST00000562039 P3H3Q8IVL6 736 aa15.88■□□□□ 0.13
NSMCE1-203ENST00000562039 CTTNBP2Q8WZ74 1663 aa15.88■□□□□ 0.13
NSMCE1-203ENST00000562039 UGGT2Q9NYU1 1516 aa15.88■□□□□ 0.13
NSMCE1-203ENST00000562039 KIAA0556O60303 1618 aa15.86■□□□□ 0.13
NSMCE1-203ENST00000562039 KIF13AQ9H1H9 1805 aa15.85■□□□□ 0.13
NSMCE1-203ENST00000562039 UACAQ9BZF9 1416 aa15.82■□□□□ 0.12
NSMCE1-203ENST00000562039 MAPKBP1O60336 1514 aa15.8■□□□□ 0.12
NSMCE1-203ENST00000562039 ABCC10Q5T3U5 1492 aa15.8■□□□□ 0.12
NSMCE1-203ENST00000562039 ARID3CA6NKF2 412 aa15.8■□□□□ 0.12
NSMCE1-203ENST00000562039 ABCC2Q92887 1545 aa15.79■□□□□ 0.12
NSMCE1-203ENST00000562039 DIP2BQ9P265 1576 aa15.79■□□□□ 0.12
NSMCE1-203ENST00000562039 PLB1Q6P1J6 1458 aa15.78■□□□□ 0.12
NSMCE1-203ENST00000562039 EEA1Q15075 1411 aa15.77■□□□□ 0.12
NSMCE1-203ENST00000562039 TSPOAP1O95153 1857 aa15.77■□□□□ 0.11
NSMCE1-203ENST00000562039 GOLGA3Q08378 1498 aa15.77■□□□□ 0.11
NSMCE1-203ENST00000562039 ASXL2Q76L83 1435 aa15.76■□□□□ 0.11
NSMCE1-203ENST00000562039 UHRF1BP1LA0JNW5 1464 aa15.75■□□□□ 0.11
NSMCE1-203ENST00000562039 ZCCHC11Q5TAX3 1644 aaKnown RBP15.72■□□□□ 0.11
NSMCE1-203ENST00000562039 KDM5BQ9UGL1 1544 aa15.7■□□□□ 0.1
NSMCE1-203ENST00000562039 UBTFP17480 764 aaKnown RBP15.7■□□□□ 0.1
NSMCE1-203ENST00000562039 KCNH8Q96L42 1107 aa15.69■□□□□ 0.1
NSMCE1-203ENST00000562039 ABCA8O94911 1581 aa15.68■□□□□ 0.1
NSMCE1-203ENST00000562039 FHOD3Q2V2M9 1422 aa15.68■□□□□ 0.1
NSMCE1-203ENST00000562039 KIF21BO75037 1637 aa15.67■□□□□ 0.1
NSMCE1-203ENST00000562039 SAMD9Q5K651 1589 aa15.66■□□□□ 0.1
NSMCE1-203ENST00000562039 EPRSP07814 1512 aaKnown RBP15.65■□□□□ 0.1
NSMCE1-203ENST00000562039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.64■□□□□ 0.09
NSMCE1-203ENST00000562039 HNRNPUL2Q1KMD3 747 aaKnown RBP15.64■□□□□ 0.09
NSMCE1-203ENST00000562039 WDR7Q9Y4E6 1490 aa15.62■□□□□ 0.09
NSMCE1-203ENST00000562039 KDM6BO15054 1643 aa15.61■□□□□ 0.09
NSMCE1-203ENST00000562039 GLI2P10070 1586 aa15.6■□□□□ 0.09
NSMCE1-203ENST00000562039 PPRC1Q5VV67 1664 aaKnown RBP15.6■□□□□ 0.09
NSMCE1-203ENST00000562039 ATP10BO94823 1461 aa15.59■□□□□ 0.09
NSMCE1-203ENST00000562039 RAPGEF6Q8TEU7 1601 aa15.58■□□□□ 0.09
NSMCE1-203ENST00000562039 ATP1B4Q9UN42 357 aaPredicted RBP15.58■□□□□ 0.08
NSMCE1-203ENST00000562039 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
NSMCE1-203ENST00000562039 MAP3K4Q9Y6R4 1608 aa15.56■□□□□ 0.08
NSMCE1-203ENST00000562039 NUP153P49790 1475 aaKnown RBP15.53■□□□□ 0.08
NSMCE1-203ENST00000562039 CD109Q6YHK3 1445 aa15.53■□□□□ 0.08
NSMCE1-203ENST00000562039 COL17A1Q9UMD9 1497 aaPredicted RBP15.52■□□□□ 0.08
NSMCE1-203ENST00000562039 EFCAB5A4FU69 1503 aa15.52■□□□□ 0.07
NSMCE1-203ENST00000562039 ARHGAP35Q9NRY4 1499 aa15.51■□□□□ 0.07
NSMCE1-203ENST00000562039 TEX14Q8IWB6 1497 aa15.49■□□□□ 0.07
NSMCE1-203ENST00000562039 CFAP43Q8NDM7 1665 aa15.47■□□□□ 0.07
NSMCE1-203ENST00000562039 CDK13Q14004 1512 aaKnown RBP15.47■□□□□ 0.07
NSMCE1-203ENST00000562039 PLEKHD1A6NEE1 506 aa15.46■□□□□ 0.07
NSMCE1-203ENST00000562039 MAGI3Q5TCQ9 1506 aa15.43■□□□□ 0.06
NSMCE1-203ENST00000562039 KDM4FA0A1W2PPD8 638 aa15.41■□□□□ 0.06
NSMCE1-203ENST00000562039 ABCA9Q8IUA7 1624 aa15.4■□□□□ 0.06
NSMCE1-203ENST00000562039 FMN1Q68DA7 1419 aa15.4■□□□□ 0.06
NSMCE1-203ENST00000562039 HECW1Q76N89 1606 aa15.37■□□□□ 0.05
NSMCE1-203ENST00000562039 RAPGEF3O95398 923 aa15.37■□□□□ 0.05
NSMCE1-203ENST00000562039 CLIP1P30622 1438 aa15.35■□□□□ 0.05
NSMCE1-203ENST00000562039 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.34■□□□□ 0.05
NSMCE1-203ENST00000562039 PCF11O94913 1555 aaKnown RBP15.34■□□□□ 0.05
NSMCE1-203ENST00000562039 TTC37Q6PGP7 1564 aa15.34■□□□□ 0.05
NSMCE1-203ENST00000562039 LOC105371045A0A1W2PR82 267 aa15.34■□□□□ 0.05
NSMCE1-203ENST00000562039 LRRIQ1Q96JM4 1722 aa15.34■□□□□ 0.05
NSMCE1-203ENST00000562039 ADGRL1O94910 1474 aa15.31■□□□□ 0.04
NSMCE1-203ENST00000562039 KIF14Q15058 1648 aa15.3■□□□□ 0.04
NSMCE1-203ENST00000562039 ARAP3Q8WWN8 1544 aa15.3■□□□□ 0.04
NSMCE1-203ENST00000562039 CDK11AQ9UQ88 783 aaPredicted RBP15.3■□□□□ 0.04
NSMCE1-203ENST00000562039 FANCAO15360 1455 aa15.28■□□□□ 0.04
NSMCE1-203ENST00000562039 NEO1Q92859 1461 aa15.28■□□□□ 0.04
NSMCE1-203ENST00000562039 AKNAQ7Z591 1439 aa15.28■□□□□ 0.04
NSMCE1-203ENST00000562039 CASKIN1Q8WXD9 1431 aa15.28■□□□□ 0.04
NSMCE1-203ENST00000562039 TROQ12816 1431 aaPredicted RBP15.26■□□□□ 0.03
NSMCE1-203ENST00000562039 PHLDB1Q86UU1 1377 aa15.24■□□□□ 0.03
NSMCE1-203ENST00000562039 FRMPD1Q5SYB0 1578 aa15.24■□□□□ 0.03
NSMCE1-203ENST00000562039 DENND4BO75064 1496 aaPredicted RBP15.24■□□□□ 0.03
NSMCE1-203ENST00000562039 CEP162Q5TB80 1403 aa15.24■□□□□ 0.03
NSMCE1-203ENST00000562039 PLCH2O75038 1416 aa15.23■□□□□ 0.03
NSMCE1-203ENST00000562039 ARID4BQ4LE39 1312 aaPredicted RBP15.22■□□□□ 0.03
NSMCE1-203ENST00000562039 CCDC18Q5T9S5 1454 aa15.21■□□□□ 0.03
NSMCE1-203ENST00000562039 FYCO1Q9BQS8 1478 aa15.21■□□□□ 0.03
NSMCE1-203ENST00000562039 SCAPERQ9BY12 1400 aa15.21■□□□□ 0.03
NSMCE1-203ENST00000562039 EFCAB2Q5VUJ9 269 aa15.21■□□□□ 0.03
NSMCE1-203ENST00000562039 MYO5CQ9NQX4 1742 aa15.2■□□□□ 0.02
NSMCE1-203ENST00000562039 ARHGAP5Q13017 1502 aa15.2■□□□□ 0.02
NSMCE1-203ENST00000562039 CFAP74Q9C0B2 1584 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms