RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 EEA1Q15075 1411 aa39.1■■■■□ 3.85
SMPD3-202ENST00000561749 ERCC6L2Q5T890 1561 aa39.1■■■■□ 3.85
SMPD3-202ENST00000561749 ARAP1Q96P48 1450 aa39.09■■■■□ 3.85
SMPD3-202ENST00000561749 CSRNP3Q8WYN3 585 aa39.08■■■■□ 3.85
SMPD3-202ENST00000561749 KIAA0586Q9BVV6 1533 aa39.08■■■■□ 3.85
SMPD3-202ENST00000561749 PRXQ9BXM0 1461 aa39.07■■■■□ 3.85
SMPD3-202ENST00000561749 JPH4Q96JJ6 628 aa39.01■■■■□ 3.84
SMPD3-202ENST00000561749 CYB5RLQ6IPT4 315 aa39■■■■□ 3.83
SMPD3-202ENST00000561749 PRG4Q92954 1404 aaPredicted RBP38.97■■■■□ 3.83
SMPD3-202ENST00000561749 IQGAP2Q13576 1575 aa38.95■■■■□ 3.83
SMPD3-202ENST00000561749 CTTNBP2Q8WZ74 1663 aa38.94■■■■□ 3.82
SMPD3-202ENST00000561749 KIF21BO75037 1637 aa38.79■■■■□ 3.8
SMPD3-202ENST00000561749 UGGT2Q9NYU1 1516 aa38.7■■■■□ 3.79
SMPD3-202ENST00000561749 EHMT2Q96KQ7 1210 aa38.69■■■■□ 3.78
SMPD3-202ENST00000561749 CARMIL2Q6F5E8 1435 aa38.65■■■■□ 3.78
SMPD3-202ENST00000561749 DISP1Q96F81 1524 aa38.64■■■■□ 3.78
SMPD3-202ENST00000561749 KIAA0556O60303 1618 aa38.6■■■■□ 3.77
SMPD3-202ENST00000561749 TTBK1Q5TCY1 1321 aaPredicted RBP38.59■■■■□ 3.77
SMPD3-202ENST00000561749 GOLGA3Q08378 1498 aa38.54■■■■□ 3.76
SMPD3-202ENST00000561749 TNIKQ9UKE5 1360 aa38.53■■■■□ 3.76
SMPD3-202ENST00000561749 PTPRGP23470 1445 aa38.5■■■■□ 3.75
SMPD3-202ENST00000561749 UBTFP17480 764 aaKnown RBP38.46■■■■□ 3.75
SMPD3-202ENST00000561749 RANGAP1P46060 587 aaPredicted RBP38.45■■■■□ 3.75
SMPD3-202ENST00000561749 ADCY10Q96PN6 1610 aa38.41■■■■□ 3.74
SMPD3-202ENST00000561749 SAMD9Q5K651 1589 aa38.37■■■■□ 3.73
SMPD3-202ENST00000561749 P3H3Q8IVL6 736 aa38.36■■■■□ 3.73
SMPD3-202ENST00000561749 UACAQ9BZF9 1416 aa38.25■■■■□ 3.71
SMPD3-202ENST00000561749 ABCC2Q92887 1545 aa38.21■■■■□ 3.71
SMPD3-202ENST00000561749 NPM1P06748 294 aaKnown RBP eCLIP38.19■■■■□ 3.7
SMPD3-202ENST00000561749 TRHP20396 242 aaPredicted RBP38.19■■■■□ 3.7
SMPD3-202ENST00000561749 PLB1Q6P1J6 1458 aa38.19■■■■□ 3.7
SMPD3-202ENST00000561749 EFCAB5A4FU69 1503 aa38.18■■■■□ 3.7
SMPD3-202ENST00000561749 FHOD3Q2V2M9 1422 aa38.18■■■■□ 3.7
SMPD3-202ENST00000561749 UHRF1BP1LA0JNW5 1464 aa38.17■■■■□ 3.7
SMPD3-202ENST00000561749 ABCA8O94911 1581 aa38.14■■■■□ 3.7
SMPD3-202ENST00000561749 MAPKBP1O60336 1514 aa38.06■■■■□ 3.68
SMPD3-202ENST00000561749 ARHGAP35Q9NRY4 1499 aa38.05■■■■□ 3.68
SMPD3-202ENST00000561749 ZCCHC11Q5TAX3 1644 aaKnown RBP38.05■■■■□ 3.68
SMPD3-202ENST00000561749 KDM5BQ9UGL1 1544 aa38.02■■■■□ 3.68
SMPD3-202ENST00000561749 RAPGEF6Q8TEU7 1601 aa38.01■■■■□ 3.67
SMPD3-202ENST00000561749 KIF13AQ9H1H9 1805 aa37.98■■■■□ 3.67
SMPD3-202ENST00000561749 LOC105371045A0A1W2PR82 267 aa37.94■■■■□ 3.66
SMPD3-202ENST00000561749 ARID3CA6NKF2 412 aa37.93■■■■□ 3.66
SMPD3-202ENST00000561749 ASXL2Q76L83 1435 aa37.91■■■■□ 3.66
SMPD3-202ENST00000561749 DIP2BQ9P265 1576 aa37.88■■■■□ 3.65
SMPD3-202ENST00000561749 CLIP1P30622 1438 aa37.87■■■■□ 3.65
SMPD3-202ENST00000561749 ABCC10Q5T3U5 1492 aa37.86■■■■□ 3.65
SMPD3-202ENST00000561749 NUP153P49790 1475 aaKnown RBP37.82■■■■□ 3.64
SMPD3-202ENST00000561749 ATP10BO94823 1461 aa37.8■■■■□ 3.64
SMPD3-202ENST00000561749 FAM69CQ0P6D2 419 aa37.8■■■■□ 3.64
SMPD3-202ENST00000561749 FMN1Q68DA7 1419 aa37.79■■■■□ 3.64
SMPD3-202ENST00000561749 CEP162Q5TB80 1403 aa37.75■■■■□ 3.63
SMPD3-202ENST00000561749 WDR7Q9Y4E6 1490 aa37.73■■■■□ 3.63
SMPD3-202ENST00000561749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.7■■■■□ 3.63
SMPD3-202ENST00000561749 HNRNPUL2Q1KMD3 747 aaKnown RBP37.7■■■■□ 3.63
SMPD3-202ENST00000561749 ATP1B4Q9UN42 357 aaPredicted RBP37.7■■■■□ 3.63
SMPD3-202ENST00000561749 TSPOAP1O95153 1857 aa37.7■■■■□ 3.63
SMPD3-202ENST00000561749 HECW1Q76N89 1606 aa37.69■■■■□ 3.62
SMPD3-202ENST00000561749 EPRSP07814 1512 aaKnown RBP37.68■■■■□ 3.62
SMPD3-202ENST00000561749 PCF11O94913 1555 aaKnown RBP37.66■■■■□ 3.62
SMPD3-202ENST00000561749 CDK13Q14004 1512 aaKnown RBP37.64■■■■□ 3.62
SMPD3-202ENST00000561749 GLI2P10070 1586 aa37.63■■■■□ 3.62
SMPD3-202ENST00000561749 LRRIQ1Q96JM4 1722 aa37.62■■■■□ 3.61
SMPD3-202ENST00000561749 KCNH8Q96L42 1107 aa37.61■■■■□ 3.61
SMPD3-202ENST00000561749 CASKIN1Q8WXD9 1431 aa37.54■■■■□ 3.6
SMPD3-202ENST00000561749 MAP3K4Q9Y6R4 1608 aa37.54■■■■□ 3.6
SMPD3-202ENST00000561749 PPRC1Q5VV67 1664 aaKnown RBP37.5■■■■□ 3.59
SMPD3-202ENST00000561749 FYCO1Q9BQS8 1478 aa37.48■■■■□ 3.59
SMPD3-202ENST00000561749 PLEKHD1A6NEE1 506 aa37.46■■■■□ 3.59
SMPD3-202ENST00000561749 CFAP43Q8NDM7 1665 aa37.46■■■■□ 3.59
SMPD3-202ENST00000561749 ABCA9Q8IUA7 1624 aa37.39■■■■□ 3.58
SMPD3-202ENST00000561749 CCDC18Q5T9S5 1454 aa37.38■■■■□ 3.57
SMPD3-202ENST00000561749 CD109Q6YHK3 1445 aa37.36■■■■□ 3.57
SMPD3-202ENST00000561749 CDK11AQ9UQ88 783 aaPredicted RBP37.3■■■■□ 3.56
SMPD3-202ENST00000561749 TEX14Q8IWB6 1497 aa37.27■■■■□ 3.56
SMPD3-202ENST00000561749 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.27■■■■□ 3.56
SMPD3-202ENST00000561749 TTC37Q6PGP7 1564 aa37.26■■■■□ 3.56
SMPD3-202ENST00000561749 VPS8Q8N3P4 1428 aa37.26■■■■□ 3.55
SMPD3-202ENST00000561749 MAGI3Q5TCQ9 1506 aa37.26■■■■□ 3.55
SMPD3-202ENST00000561749 KDM6BO15054 1643 aa37.25■■■■□ 3.55
SMPD3-202ENST00000561749 KIF14Q15058 1648 aa37.25■■■■□ 3.55
SMPD3-202ENST00000561749 TROQ12816 1431 aaPredicted RBP37.25■■■■□ 3.55
SMPD3-202ENST00000561749 MYO5CQ9NQX4 1742 aa37.1■■■■□ 3.53
SMPD3-202ENST00000561749 COL17A1Q9UMD9 1497 aaPredicted RBP37.07■■■■□ 3.53
SMPD3-202ENST00000561749 TIAM1Q13009 1591 aa37.04■■■■□ 3.52
SMPD3-202ENST00000561749 MTUS2Q5JR59 1369 aa37.04■■■■□ 3.52
SMPD3-202ENST00000561749 NEO1Q92859 1461 aa37■■■■□ 3.51
SMPD3-202ENST00000561749 FANCAO15360 1455 aa36.99■■■■□ 3.51
SMPD3-202ENST00000561749 EHBP1L1Q8N3D4 1523 aa36.99■■■■□ 3.51
SMPD3-202ENST00000561749 CFAP74Q9C0B2 1584 aa36.99■■■■□ 3.51
SMPD3-202ENST00000561749 PLCH2O75038 1416 aa36.98■■■■□ 3.51
SMPD3-202ENST00000561749 CDC42BPAQ5VT25 1732 aa36.95■■■■□ 3.51
SMPD3-202ENST00000561749 CDC42BPBQ9Y5S2 1711 aa36.95■■■■□ 3.51
SMPD3-202ENST00000561749 PREX2Q70Z35 1606 aa36.92■■■■□ 3.5
SMPD3-202ENST00000561749 ARAP3Q8WWN8 1544 aa36.92■■■■□ 3.5
SMPD3-202ENST00000561749 ARHGAP5Q13017 1502 aa36.91■■■■□ 3.5
SMPD3-202ENST00000561749 AKNAQ7Z591 1439 aa36.91■■■■□ 3.5
SMPD3-202ENST00000561749 PHLDB1Q86UU1 1377 aa36.91■■■■□ 3.5
SMPD3-202ENST00000561749 MAP3K1Q13233 1512 aa36.86■■■■□ 3.49
SMPD3-202ENST00000561749 SUPT6HQ7KZ85 1726 aaKnown RBP36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms