RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
SPG7-203ENST00000561702 ARAP1Q96P48 1450 aa22.22■■□□□ 1.15
SPG7-203ENST00000561702 ARHGAP35Q9NRY4 1499 aa22.21■■□□□ 1.15
SPG7-203ENST00000561702 VPS8Q8N3P4 1428 aa22.2■■□□□ 1.14
SPG7-203ENST00000561702 PPARGC1BQ86YN6 1023 aaKnown RBP22.19■■□□□ 1.14
SPG7-203ENST00000561702 MAGI1Q96QZ7 1491 aaPredicted RBP22.16■■□□□ 1.14
SPG7-203ENST00000561702 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
SPG7-203ENST00000561702 SYNJ2O15056 1496 aa22.08■■□□□ 1.12
SPG7-203ENST00000561702 EFCAB5A4FU69 1503 aa22.07■■□□□ 1.12
SPG7-203ENST00000561702 IQGAP2Q13576 1575 aa22.03■■□□□ 1.12
SPG7-203ENST00000561702 SAMD9Q5K651 1589 aa22.03■■□□□ 1.12
SPG7-203ENST00000561702 CHMP7Q8WUX9 453 aaPredicted RBP21.99■■□□□ 1.11
SPG7-203ENST00000561702 FHOD3Q2V2M9 1422 aa21.99■■□□□ 1.11
SPG7-203ENST00000561702 P3H3Q8IVL6 736 aa21.99■■□□□ 1.11
SPG7-203ENST00000561702 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
SPG7-203ENST00000561702 KIAA0586Q9BVV6 1533 aa21.97■■□□□ 1.11
SPG7-203ENST00000561702 FBLN2P98095 1184 aa21.94■■□□□ 1.1
SPG7-203ENST00000561702 NUP160Q12769 1436 aa21.93■■□□□ 1.1
SPG7-203ENST00000561702 UGGT2Q9NYU1 1516 aa21.93■■□□□ 1.1
SPG7-203ENST00000561702 CHD1O14646 1710 aa21.91■■□□□ 1.1
SPG7-203ENST00000561702 TTBK1Q5TCY1 1321 aaPredicted RBP21.91■■□□□ 1.1
SPG7-203ENST00000561702 APLP2Q06481 763 aa21.9■■□□□ 1.1
SPG7-203ENST00000561702 PCF11O94913 1555 aaKnown RBP21.9■■□□□ 1.1
SPG7-203ENST00000561702 FMN1Q68DA7 1419 aa21.85■■□□□ 1.09
SPG7-203ENST00000561702 KIAA0556O60303 1618 aa21.83■■□□□ 1.08
SPG7-203ENST00000561702 DISP1Q96F81 1524 aa21.83■■□□□ 1.08
SPG7-203ENST00000561702 FYCO1Q9BQS8 1478 aa21.82■■□□□ 1.08
SPG7-203ENST00000561702 CASKIN1Q8WXD9 1431 aa21.82■■□□□ 1.08
SPG7-203ENST00000561702 TIAM1Q13009 1591 aa21.81■■□□□ 1.08
SPG7-203ENST00000561702 MAP3K1Q13233 1512 aa21.81■■□□□ 1.08
SPG7-203ENST00000561702 CFAP43Q8NDM7 1665 aa21.79■■□□□ 1.08
SPG7-203ENST00000561702 KANK4Q5T7N3 995 aaPredicted RBP21.79■■□□□ 1.08
SPG7-203ENST00000561702 LRRIQ1Q96JM4 1722 aa21.75■■□□□ 1.07
SPG7-203ENST00000561702 CCER1Q8TC90 406 aaPredicted RBP21.75■■□□□ 1.07
SPG7-203ENST00000561702 JPH4Q96JJ6 628 aa21.73■■□□□ 1.07
SPG7-203ENST00000561702 ATP1B4Q9UN42 357 aaPredicted RBP21.72■■□□□ 1.07
SPG7-203ENST00000561702 LRRC9Q6ZRR7 1453 aa21.69■■□□□ 1.06
SPG7-203ENST00000561702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
SPG7-203ENST00000561702 HECW1Q76N89 1606 aa21.67■■□□□ 1.06
SPG7-203ENST00000561702 CARMIL2Q6F5E8 1435 aa21.67■■□□□ 1.06
SPG7-203ENST00000561702 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
SPG7-203ENST00000561702 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
SPG7-203ENST00000561702 PRG4Q92954 1404 aaPredicted RBP21.61■■□□□ 1.05
SPG7-203ENST00000561702 RAPGEF6Q8TEU7 1601 aa21.61■■□□□ 1.05
SPG7-203ENST00000561702 CCDC18Q5T9S5 1454 aa21.59■■□□□ 1.05
SPG7-203ENST00000561702 EPRSP07814 1512 aaKnown RBP21.58■■□□□ 1.04
SPG7-203ENST00000561702 CDK13Q14004 1512 aaKnown RBP21.55■■□□□ 1.04
SPG7-203ENST00000561702 NUP153P49790 1475 aaKnown RBP21.54■■□□□ 1.04
SPG7-203ENST00000561702 PLB1Q6P1J6 1458 aa21.54■■□□□ 1.04
SPG7-203ENST00000561702 RRBP1Q9P2E9 1410 aaKnown RBP21.53■■□□□ 1.04
SPG7-203ENST00000561702 MAGI3Q5TCQ9 1506 aa21.53■■□□□ 1.04
SPG7-203ENST00000561702 ERCC6L2Q5T890 1561 aa21.52■■□□□ 1.04
SPG7-203ENST00000561702 EHBP1L1Q8N3D4 1523 aa21.51■■□□□ 1.03
SPG7-203ENST00000561702 ABCA8O94911 1581 aa21.51■■□□□ 1.03
SPG7-203ENST00000561702 MTUS2Q5JR59 1369 aa21.51■■□□□ 1.03
SPG7-203ENST00000561702 PHLDB1Q86UU1 1377 aa21.5■■□□□ 1.03
SPG7-203ENST00000561702 ARID3CA6NKF2 412 aa21.48■■□□□ 1.03
SPG7-203ENST00000561702 SUPT6HQ7KZ85 1726 aaKnown RBP21.47■■□□□ 1.03
SPG7-203ENST00000561702 PTPRGP23470 1445 aa21.46■■□□□ 1.03
SPG7-203ENST00000561702 CCNB3Q8WWL7 1395 aa21.45■■□□□ 1.02
SPG7-203ENST00000561702 NCOA2Q15596 1464 aa21.43■■□□□ 1.02
SPG7-203ENST00000561702 HNRNPUL2Q1KMD3 747 aaKnown RBP21.41■■□□□ 1.02
SPG7-203ENST00000561702 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
SPG7-203ENST00000561702 OSCARQ8IYS5 282 aa21.36■■□□□ 1.01
SPG7-203ENST00000561702 ATP10BO94823 1461 aa21.35■■□□□ 1.01
SPG7-203ENST00000561702 UACAQ9BZF9 1416 aa21.35■■□□□ 1.01
SPG7-203ENST00000561702 MYOM3Q5VTT5 1437 aa21.33■■□□□ 1.01
SPG7-203ENST00000561702 FGD6Q6ZV73 1430 aa21.33■■□□□ 1.01
SPG7-203ENST00000561702 CDK11AQ9UQ88 783 aaPredicted RBP21.32■■□□□ 1
SPG7-203ENST00000561702 TROQ12816 1431 aaPredicted RBP21.31■■□□□ 1
SPG7-203ENST00000561702 ABCC2Q92887 1545 aa21.3■■□□□ 1
SPG7-203ENST00000561702 ADCY10Q96PN6 1610 aa21.3■■□□□ 1
SPG7-203ENST00000561702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.28■■□□□ 1
SPG7-203ENST00000561702 FAM50AQ14320 339 aaKnown RBP21.28■■□□□ 1
SPG7-203ENST00000561702 CLSPNQ9HAW4 1339 aa21.27■■□□□ 1
SPG7-203ENST00000561702 KIF14Q15058 1648 aa21.26■□□□□ 0.99
SPG7-203ENST00000561702 PTPN23Q9H3S7 1636 aa21.25■□□□□ 0.99
SPG7-203ENST00000561702 UHRF1BP1LA0JNW5 1464 aa21.24■□□□□ 0.99
SPG7-203ENST00000561702 ITGAEP38570 1179 aa21.24■□□□□ 0.99
SPG7-203ENST00000561702 PLEKHD1A6NEE1 506 aa21.21■□□□□ 0.99
SPG7-203ENST00000561702 DIEXFQ68CQ4 756 aaKnown RBP21.21■□□□□ 0.99
SPG7-203ENST00000561702 TCOF1Q13428 1488 aaKnown RBP21.21■□□□□ 0.99
SPG7-203ENST00000561702 MIA2Q96PC5 1412 aa21.2■□□□□ 0.98
SPG7-203ENST00000561702 ZCCHC11Q5TAX3 1644 aaKnown RBP21.19■□□□□ 0.98
SPG7-203ENST00000561702 ZNF316A6NFI3 1004 aaPredicted RBP21.18■□□□□ 0.98
SPG7-203ENST00000561702 ITSN2Q9NZM3 1697 aa21.17■□□□□ 0.98
SPG7-203ENST00000561702 KDM5BQ9UGL1 1544 aa21.16■□□□□ 0.98
SPG7-203ENST00000561702 ABCC10Q5T3U5 1492 aa21.16■□□□□ 0.98
SPG7-203ENST00000561702 CDC42BPAQ5VT25 1732 aa21.14■□□□□ 0.98
SPG7-203ENST00000561702 GPATCH8Q9UKJ3 1502 aaKnown RBP21.14■□□□□ 0.97
SPG7-203ENST00000561702 PTPRKQ15262 1439 aa21.12■□□□□ 0.97
SPG7-203ENST00000561702 DHX57Q6P158 1386 aaKnown RBP21.07■□□□□ 0.96
SPG7-203ENST00000561702 SETD5Q9C0A6 1442 aa21.06■□□□□ 0.96
SPG7-203ENST00000561702 ZNF644Q9H582 1327 aaPredicted RBP21.05■□□□□ 0.96
SPG7-203ENST00000561702 CFDP1Q9UEE9 299 aaPredicted RBP21.05■□□□□ 0.96
SPG7-203ENST00000561702 RAB3GAP2Q9H2M9 1393 aa21.05■□□□□ 0.96
SPG7-203ENST00000561702 CAMSAP2Q08AD1 1489 aa21.05■□□□□ 0.96
SPG7-203ENST00000561702 TTC37Q6PGP7 1564 aa21.05■□□□□ 0.96
SPG7-203ENST00000561702 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.04■□□□□ 0.96
SPG7-203ENST00000561702 DNMT1P26358 1616 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms