RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 KIAA0586Q9BVV6 1533 aa31.51■■■□□ 2.63
PKD1-223ENST00000561668 ERCC6L2Q5T890 1561 aa31.51■■■□□ 2.63
PKD1-223ENST00000561668 RUSC2Q8N2Y8 1516 aa31.5■■■□□ 2.63
PKD1-223ENST00000561668 TRHP20396 242 aaPredicted RBP31.47■■■□□ 2.63
PKD1-223ENST00000561668 CHIC1Q5VXU3 224 aa31.45■■■□□ 2.63
PKD1-223ENST00000561668 RAPGEF2Q9Y4G8 1499 aa31.42■■■□□ 2.62
PKD1-223ENST00000561668 IQGAP2Q13576 1575 aa31.26■■■□□ 2.6
PKD1-223ENST00000561668 CARMIL2Q6F5E8 1435 aa31.26■■■□□ 2.6
PKD1-223ENST00000561668 CSRNP3Q8WYN3 585 aa31.25■■■□□ 2.59
PKD1-223ENST00000561668 EEA1Q15075 1411 aa31.24■■■□□ 2.59
PKD1-223ENST00000561668 NPM1P06748 294 aaKnown RBP eCLIP31.23■■■□□ 2.59
PKD1-223ENST00000561668 TTBK1Q5TCY1 1321 aaPredicted RBP31.2■■■□□ 2.58
PKD1-223ENST00000561668 PRXQ9BXM0 1461 aa31.2■■■□□ 2.58
PKD1-223ENST00000561668 PTPRGP23470 1445 aa31.16■■■□□ 2.58
PKD1-223ENST00000561668 TNIKQ9UKE5 1360 aa31.14■■■□□ 2.58
PKD1-223ENST00000561668 FAM9AQ8IZU1 332 aaPredicted RBP31.12■■■□□ 2.57
PKD1-223ENST00000561668 UGGT2Q9NYU1 1516 aa31.07■■■□□ 2.56
PKD1-223ENST00000561668 CTTNBP2Q8WZ74 1663 aa31.06■■■□□ 2.56
PKD1-223ENST00000561668 DISP1Q96F81 1524 aa31.03■■■□□ 2.56
PKD1-223ENST00000561668 ADCY10Q96PN6 1610 aa30.98■■■□□ 2.55
PKD1-223ENST00000561668 GOLGA3Q08378 1498 aa30.97■■■□□ 2.55
PKD1-223ENST00000561668 KIAA0556O60303 1618 aa30.93■■■□□ 2.54
PKD1-223ENST00000561668 UACAQ9BZF9 1416 aa30.91■■■□□ 2.54
PKD1-223ENST00000561668 FAM69CQ0P6D2 419 aa30.87■■■□□ 2.53
PKD1-223ENST00000561668 MAPKBP1O60336 1514 aa30.87■■■□□ 2.53
PKD1-223ENST00000561668 KIF21BO75037 1637 aa30.87■■■□□ 2.53
PKD1-223ENST00000561668 ABCC2Q92887 1545 aa30.84■■■□□ 2.53
PKD1-223ENST00000561668 UHRF1BP1LA0JNW5 1464 aa30.84■■■□□ 2.53
PKD1-223ENST00000561668 P3H3Q8IVL6 736 aa30.82■■■□□ 2.52
PKD1-223ENST00000561668 RANGAP1P46060 587 aaPredicted RBP30.8■■■□□ 2.52
PKD1-223ENST00000561668 ABCC10Q5T3U5 1492 aa30.8■■■□□ 2.52
PKD1-223ENST00000561668 UBTFP17480 764 aaKnown RBP30.76■■■□□ 2.51
PKD1-223ENST00000561668 EHMT2Q96KQ7 1210 aa30.76■■■□□ 2.51
PKD1-223ENST00000561668 KIF13AQ9H1H9 1805 aa30.75■■■□□ 2.51
PKD1-223ENST00000561668 PLB1Q6P1J6 1458 aa30.7■■■□□ 2.51
PKD1-223ENST00000561668 ASXL2Q76L83 1435 aa30.7■■■□□ 2.5
PKD1-223ENST00000561668 KDM5BQ9UGL1 1544 aa30.69■■■□□ 2.5
PKD1-223ENST00000561668 DIP2BQ9P265 1576 aa30.67■■■□□ 2.5
PKD1-223ENST00000561668 SAMD9Q5K651 1589 aa30.62■■■□□ 2.49
PKD1-223ENST00000561668 ZCCHC11Q5TAX3 1644 aaKnown RBP30.62■■■□□ 2.49
PKD1-223ENST00000561668 ABCA8O94911 1581 aa30.61■■■□□ 2.49
PKD1-223ENST00000561668 ARID3CA6NKF2 412 aa30.52■■■□□ 2.48
PKD1-223ENST00000561668 TSPOAP1O95153 1857 aa30.5■■■□□ 2.47
PKD1-223ENST00000561668 FHOD3Q2V2M9 1422 aa30.5■■■□□ 2.47
PKD1-223ENST00000561668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.5■■■□□ 2.47
PKD1-223ENST00000561668 HNRNPUL2Q1KMD3 747 aaKnown RBP30.5■■■□□ 2.47
PKD1-223ENST00000561668 KCNH8Q96L42 1107 aa30.5■■■□□ 2.47
PKD1-223ENST00000561668 EFCAB5A4FU69 1503 aa30.5■■■□□ 2.47
PKD1-223ENST00000561668 GLI2P10070 1586 aa30.49■■■□□ 2.47
PKD1-223ENST00000561668 EPRSP07814 1512 aaKnown RBP30.48■■■□□ 2.47
PKD1-223ENST00000561668 WDR7Q9Y4E6 1490 aa30.48■■■□□ 2.47
PKD1-223ENST00000561668 RAPGEF6Q8TEU7 1601 aa30.44■■■□□ 2.46
PKD1-223ENST00000561668 ATP10BO94823 1461 aa30.43■■■□□ 2.46
PKD1-223ENST00000561668 ATP1B4Q9UN42 357 aaPredicted RBP30.33■■■□□ 2.45
PKD1-223ENST00000561668 KDM6BO15054 1643 aa30.32■■■□□ 2.44
PKD1-223ENST00000561668 MAP3K4Q9Y6R4 1608 aa30.32■■■□□ 2.44
PKD1-223ENST00000561668 TEX14Q8IWB6 1497 aa30.31■■■□□ 2.44
PKD1-223ENST00000561668 NUP153P49790 1475 aaKnown RBP30.31■■■□□ 2.44
PKD1-223ENST00000561668 PLEKHD1A6NEE1 506 aa30.3■■■□□ 2.44
PKD1-223ENST00000561668 ARHGAP35Q9NRY4 1499 aa30.3■■■□□ 2.44
PKD1-223ENST00000561668 FMN1Q68DA7 1419 aa30.3■■■□□ 2.44
PKD1-223ENST00000561668 CD109Q6YHK3 1445 aa30.3■■■□□ 2.44
PKD1-223ENST00000561668 PPRC1Q5VV67 1664 aaKnown RBP30.25■■■□□ 2.43
PKD1-223ENST00000561668 CFAP43Q8NDM7 1665 aa30.23■■■□□ 2.43
PKD1-223ENST00000561668 MAGI3Q5TCQ9 1506 aa30.17■■■□□ 2.42
PKD1-223ENST00000561668 CDK11AQ9UQ88 783 aaPredicted RBP30.15■■■□□ 2.42
PKD1-223ENST00000561668 AEBP2Q6ZN18 517 aaPredicted RBP30.12■■■□□ 2.41
PKD1-223ENST00000561668 HECW1Q76N89 1606 aa30.11■■■□□ 2.41
PKD1-223ENST00000561668 CLIP1P30622 1438 aa30.1■■■□□ 2.41
PKD1-223ENST00000561668 ABCA9Q8IUA7 1624 aa30.09■■■□□ 2.41
PKD1-223ENST00000561668 LOC105371045A0A1W2PR82 267 aa30.08■■■□□ 2.41
PKD1-223ENST00000561668 CDK13Q14004 1512 aaKnown RBP30.07■■■□□ 2.4
PKD1-223ENST00000561668 COL17A1Q9UMD9 1497 aaPredicted RBP30.06■■■□□ 2.4
PKD1-223ENST00000561668 PHLDB1Q86UU1 1377 aa30.03■■■□□ 2.4
PKD1-223ENST00000561668 CEP162Q5TB80 1403 aa29.99■■■□□ 2.39
PKD1-223ENST00000561668 CASKIN1Q8WXD9 1431 aa29.98■■■□□ 2.39
PKD1-223ENST00000561668 NEO1Q92859 1461 aa29.93■■■□□ 2.38
PKD1-223ENST00000561668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.93■■■□□ 2.38
PKD1-223ENST00000561668 ARAP3Q8WWN8 1544 aa29.93■■■□□ 2.38
PKD1-223ENST00000561668 CCDC18Q5T9S5 1454 aa29.91■■■□□ 2.38
PKD1-223ENST00000561668 PCF11O94913 1555 aaKnown RBP29.9■■■□□ 2.38
PKD1-223ENST00000561668 FYCO1Q9BQS8 1478 aa29.88■■■□□ 2.37
PKD1-223ENST00000561668 TROQ12816 1431 aaPredicted RBP29.88■■■□□ 2.37
PKD1-223ENST00000561668 RAPGEF3O95398 923 aa29.85■■■□□ 2.37
PKD1-223ENST00000561668 FANCAO15360 1455 aa29.85■■■□□ 2.37
PKD1-223ENST00000561668 TTC37Q6PGP7 1564 aa29.85■■■□□ 2.37
PKD1-223ENST00000561668 LRRIQ1Q96JM4 1722 aa29.83■■■□□ 2.37
PKD1-223ENST00000561668 AKNAQ7Z591 1439 aa29.82■■■□□ 2.36
PKD1-223ENST00000561668 PLCH2O75038 1416 aa29.81■■■□□ 2.36
PKD1-223ENST00000561668 EFCAB2Q5VUJ9 269 aa29.81■■■□□ 2.36
PKD1-223ENST00000561668 KIF14Q15058 1648 aa29.81■■■□□ 2.36
PKD1-223ENST00000561668 CFAP74Q9C0B2 1584 aa29.81■■■□□ 2.36
PKD1-223ENST00000561668 KDM4FA0A1W2PPD8 638 aa29.78■■■□□ 2.36
PKD1-223ENST00000561668 DENND4BO75064 1496 aaPredicted RBP29.75■■■□□ 2.35
PKD1-223ENST00000561668 MYO5CQ9NQX4 1742 aa29.73■■■□□ 2.35
PKD1-223ENST00000561668 ADGRL1O94910 1474 aa29.68■■■□□ 2.34
PKD1-223ENST00000561668 SCAPERQ9BY12 1400 aa29.67■■■□□ 2.34
PKD1-223ENST00000561668 ARHGAP5Q13017 1502 aa29.66■■■□□ 2.34
PKD1-223ENST00000561668 VPS8Q8N3P4 1428 aa29.66■■■□□ 2.34
PKD1-223ENST00000561668 MTUS2Q5JR59 1369 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms