RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 RUSC2Q8N2Y8 1516 aa40.65■■■■■ 4.1
CDR2-202ENST00000561630 PRG4Q92954 1404 aaPredicted RBP40.59■■■■■ 4.09
CDR2-202ENST00000561630 KIAA0586Q9BVV6 1533 aa40.58■■■■■ 4.09
CDR2-202ENST00000561630 RAPGEF2Q9Y4G8 1499 aa40.4■■■■■ 4.06
CDR2-202ENST00000561630 TRHP20396 242 aaPredicted RBP40.37■■■■■ 4.05
CDR2-202ENST00000561630 IQGAP2Q13576 1575 aa40.24■■■■■ 4.03
CDR2-202ENST00000561630 PRXQ9BXM0 1461 aa40.19■■■■■ 4.03
CDR2-202ENST00000561630 CARMIL2Q6F5E8 1435 aa40.16■■■■■ 4.02
CDR2-202ENST00000561630 PTPRGP23470 1445 aa40.08■■■■■ 4.01
CDR2-202ENST00000561630 CSRNP3Q8WYN3 585 aa40.07■■■■■ 4.01
CDR2-202ENST00000561630 TNIKQ9UKE5 1360 aa40.06■■■■■ 4
CDR2-202ENST00000561630 UGGT2Q9NYU1 1516 aa40.05■■■■■ 4
CDR2-202ENST00000561630 DISP1Q96F81 1524 aa40.03■■■■■ 4
CDR2-202ENST00000561630 EEA1Q15075 1411 aa40.02■■■■■ 4
CDR2-202ENST00000561630 ADCY10Q96PN6 1610 aa39.98■■■■□ 3.99
CDR2-202ENST00000561630 NPM1P06748 294 aaKnown RBP eCLIP39.97■■■■□ 3.99
CDR2-202ENST00000561630 CHIC1Q5VXU3 224 aa39.97■■■■□ 3.99
CDR2-202ENST00000561630 TTBK1Q5TCY1 1321 aaPredicted RBP39.94■■■■□ 3.98
CDR2-202ENST00000561630 CTTNBP2Q8WZ74 1663 aa39.91■■■■□ 3.98
CDR2-202ENST00000561630 KIAA0556O60303 1618 aa39.86■■■■□ 3.97
CDR2-202ENST00000561630 MAPKBP1O60336 1514 aa39.84■■■■□ 3.97
CDR2-202ENST00000561630 FAM9AQ8IZU1 332 aaPredicted RBP39.82■■■■□ 3.97
CDR2-202ENST00000561630 UACAQ9BZF9 1416 aa39.79■■■■□ 3.96
CDR2-202ENST00000561630 GOLGA3Q08378 1498 aa39.79■■■■□ 3.96
CDR2-202ENST00000561630 UHRF1BP1LA0JNW5 1464 aa39.78■■■■□ 3.96
CDR2-202ENST00000561630 ABCC2Q92887 1545 aa39.75■■■■□ 3.95
CDR2-202ENST00000561630 ABCC10Q5T3U5 1492 aa39.73■■■■□ 3.95
CDR2-202ENST00000561630 FAM69CQ0P6D2 419 aa39.67■■■■□ 3.94
CDR2-202ENST00000561630 KIF13AQ9H1H9 1805 aa39.64■■■■□ 3.94
CDR2-202ENST00000561630 DIP2BQ9P265 1576 aa39.59■■■■□ 3.93
CDR2-202ENST00000561630 KIF21BO75037 1637 aa39.58■■■■□ 3.93
CDR2-202ENST00000561630 KDM5BQ9UGL1 1544 aa39.58■■■■□ 3.93
CDR2-202ENST00000561630 PLB1Q6P1J6 1458 aa39.56■■■■□ 3.92
CDR2-202ENST00000561630 ASXL2Q76L83 1435 aa39.55■■■■□ 3.92
CDR2-202ENST00000561630 P3H3Q8IVL6 736 aa39.5■■■■□ 3.91
CDR2-202ENST00000561630 ABCA8O94911 1581 aa39.47■■■■□ 3.91
CDR2-202ENST00000561630 SAMD9Q5K651 1589 aa39.47■■■■□ 3.91
CDR2-202ENST00000561630 ZCCHC11Q5TAX3 1644 aaKnown RBP39.42■■■■□ 3.9
CDR2-202ENST00000561630 RANGAP1P46060 587 aaPredicted RBP39.38■■■■□ 3.89
CDR2-202ENST00000561630 GLI2P10070 1586 aa39.33■■■■□ 3.89
CDR2-202ENST00000561630 UBTFP17480 764 aaKnown RBP39.32■■■■□ 3.89
CDR2-202ENST00000561630 EHMT2Q96KQ7 1210 aa39.31■■■■□ 3.88
CDR2-202ENST00000561630 EPRSP07814 1512 aaKnown RBP39.3■■■■□ 3.88
CDR2-202ENST00000561630 WDR7Q9Y4E6 1490 aa39.27■■■■□ 3.88
CDR2-202ENST00000561630 FHOD3Q2V2M9 1422 aa39.26■■■■□ 3.88
CDR2-202ENST00000561630 EFCAB5A4FU69 1503 aa39.24■■■■□ 3.87
CDR2-202ENST00000561630 ATP10BO94823 1461 aa39.18■■■■□ 3.86
CDR2-202ENST00000561630 TSPOAP1O95153 1857 aa39.16■■■■□ 3.86
CDR2-202ENST00000561630 ARID3CA6NKF2 412 aa39.16■■■■□ 3.86
CDR2-202ENST00000561630 RAPGEF6Q8TEU7 1601 aa39.15■■■■□ 3.86
CDR2-202ENST00000561630 MAP3K4Q9Y6R4 1608 aa39.1■■■■□ 3.85
CDR2-202ENST00000561630 KCNH8Q96L42 1107 aa39.09■■■■□ 3.85
CDR2-202ENST00000561630 NUP153P49790 1475 aaKnown RBP39.08■■■■□ 3.85
CDR2-202ENST00000561630 PPRC1Q5VV67 1664 aaKnown RBP39.07■■■■□ 3.85
CDR2-202ENST00000561630 KDM6BO15054 1643 aa39.04■■■■□ 3.84
CDR2-202ENST00000561630 ARHGAP35Q9NRY4 1499 aa39.01■■■■□ 3.84
CDR2-202ENST00000561630 TEX14Q8IWB6 1497 aa38.99■■■■□ 3.83
CDR2-202ENST00000561630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.98■■■■□ 3.83
CDR2-202ENST00000561630 HNRNPUL2Q1KMD3 747 aaKnown RBP38.98■■■■□ 3.83
CDR2-202ENST00000561630 CD109Q6YHK3 1445 aa38.97■■■■□ 3.83
CDR2-202ENST00000561630 FMN1Q68DA7 1419 aa38.92■■■■□ 3.82
CDR2-202ENST00000561630 MAGI3Q5TCQ9 1506 aa38.91■■■■□ 3.82
CDR2-202ENST00000561630 CFAP43Q8NDM7 1665 aa38.9■■■■□ 3.82
CDR2-202ENST00000561630 COL17A1Q9UMD9 1497 aaPredicted RBP38.85■■■■□ 3.81
CDR2-202ENST00000561630 PLEKHD1A6NEE1 506 aa38.82■■■■□ 3.8
CDR2-202ENST00000561630 ABCA9Q8IUA7 1624 aa38.78■■■■□ 3.8
CDR2-202ENST00000561630 ATP1B4Q9UN42 357 aaPredicted RBP38.73■■■■□ 3.79
CDR2-202ENST00000561630 CDK13Q14004 1512 aaKnown RBP38.73■■■■□ 3.79
CDR2-202ENST00000561630 HECW1Q76N89 1606 aa38.71■■■■□ 3.79
CDR2-202ENST00000561630 CLIP1P30622 1438 aa38.66■■■■□ 3.78
CDR2-202ENST00000561630 PHLDB1Q86UU1 1377 aa38.61■■■■□ 3.77
CDR2-202ENST00000561630 AEBP2Q6ZN18 517 aaPredicted RBP38.61■■■■□ 3.77
CDR2-202ENST00000561630 ARAP3Q8WWN8 1544 aa38.58■■■■□ 3.77
CDR2-202ENST00000561630 CASKIN1Q8WXD9 1431 aa38.58■■■■□ 3.77
CDR2-202ENST00000561630 CDK11AQ9UQ88 783 aaPredicted RBP38.58■■■■□ 3.77
CDR2-202ENST00000561630 NEO1Q92859 1461 aa38.56■■■■□ 3.76
CDR2-202ENST00000561630 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.55■■■■□ 3.76
CDR2-202ENST00000561630 PCF11O94913 1555 aaKnown RBP38.49■■■■□ 3.75
CDR2-202ENST00000561630 TTC37Q6PGP7 1564 aa38.47■■■■□ 3.75
CDR2-202ENST00000561630 TROQ12816 1431 aaPredicted RBP38.45■■■■□ 3.75
CDR2-202ENST00000561630 CCDC18Q5T9S5 1454 aa38.44■■■■□ 3.74
CDR2-202ENST00000561630 FYCO1Q9BQS8 1478 aa38.44■■■■□ 3.74
CDR2-202ENST00000561630 KDM4FA0A1W2PPD8 638 aa38.42■■■■□ 3.74
CDR2-202ENST00000561630 LRRIQ1Q96JM4 1722 aa38.41■■■■□ 3.74
CDR2-202ENST00000561630 FANCAO15360 1455 aa38.4■■■■□ 3.74
CDR2-202ENST00000561630 CEP162Q5TB80 1403 aa38.38■■■■□ 3.74
CDR2-202ENST00000561630 RAPGEF3O95398 923 aa38.38■■■■□ 3.73
CDR2-202ENST00000561630 PLCH2O75038 1416 aa38.38■■■■□ 3.73
CDR2-202ENST00000561630 AKNAQ7Z591 1439 aa38.37■■■■□ 3.73
CDR2-202ENST00000561630 KIF14Q15058 1648 aa38.33■■■■□ 3.73
CDR2-202ENST00000561630 LOC105371045A0A1W2PR82 267 aa38.32■■■■□ 3.72
CDR2-202ENST00000561630 CFAP74Q9C0B2 1584 aa38.31■■■■□ 3.72
CDR2-202ENST00000561630 DENND4BO75064 1496 aaPredicted RBP38.28■■■■□ 3.72
CDR2-202ENST00000561630 FRMPD1Q5SYB0 1578 aa38.26■■■■□ 3.72
CDR2-202ENST00000561630 ADGRL1O94910 1474 aa38.25■■■■□ 3.71
CDR2-202ENST00000561630 EFCAB2Q5VUJ9 269 aa38.23■■■■□ 3.71
CDR2-202ENST00000561630 MYO5CQ9NQX4 1742 aa38.18■■■■□ 3.7
CDR2-202ENST00000561630 SCAPERQ9BY12 1400 aa38.15■■■■□ 3.7
CDR2-202ENST00000561630 RICTORQ6R327 1708 aa38.13■■■■□ 3.69
CDR2-202ENST00000561630 ARHGAP5Q13017 1502 aa38.12■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms