RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 RUSC2Q8N2Y8 1516 aa35.33■■■■□ 3.25
TPM1-232ENST00000561425 KIAA0586Q9BVV6 1533 aa35.32■■■■□ 3.24
TPM1-232ENST00000561425 PRG4Q92954 1404 aaPredicted RBP35.3■■■■□ 3.24
TPM1-232ENST00000561425 RAPGEF2Q9Y4G8 1499 aa35.14■■■■□ 3.22
TPM1-232ENST00000561425 TRHP20396 242 aaPredicted RBP35.04■■■■□ 3.2
TPM1-232ENST00000561425 PRXQ9BXM0 1461 aa34.99■■■■□ 3.19
TPM1-232ENST00000561425 IQGAP2Q13576 1575 aa34.96■■■■□ 3.19
TPM1-232ENST00000561425 CARMIL2Q6F5E8 1435 aa34.89■■■■□ 3.18
TPM1-232ENST00000561425 UGGT2Q9NYU1 1516 aa34.86■■■■□ 3.17
TPM1-232ENST00000561425 CSRNP3Q8WYN3 585 aa34.86■■■■□ 3.17
TPM1-232ENST00000561425 PTPRGP23470 1445 aa34.85■■■■□ 3.17
TPM1-232ENST00000561425 TNIKQ9UKE5 1360 aa34.85■■■■□ 3.17
TPM1-232ENST00000561425 DISP1Q96F81 1524 aa34.84■■■■□ 3.17
TPM1-232ENST00000561425 EEA1Q15075 1411 aa34.81■■■■□ 3.16
TPM1-232ENST00000561425 ADCY10Q96PN6 1610 aa34.77■■■■□ 3.16
TPM1-232ENST00000561425 CHIC1Q5VXU3 224 aa34.76■■■■□ 3.16
TPM1-232ENST00000561425 NPM1P06748 294 aaKnown RBP eCLIP34.72■■■■□ 3.15
TPM1-232ENST00000561425 MAPKBP1O60336 1514 aa34.68■■■■□ 3.14
TPM1-232ENST00000561425 CTTNBP2Q8WZ74 1663 aa34.68■■■■□ 3.14
TPM1-232ENST00000561425 KIAA0556O60303 1618 aa34.65■■■■□ 3.14
TPM1-232ENST00000561425 UHRF1BP1LA0JNW5 1464 aa34.65■■■■□ 3.14
TPM1-232ENST00000561425 UACAQ9BZF9 1416 aa34.61■■■■□ 3.13
TPM1-232ENST00000561425 TTBK1Q5TCY1 1321 aaPredicted RBP34.59■■■■□ 3.13
TPM1-232ENST00000561425 GOLGA3Q08378 1498 aa34.58■■■■□ 3.13
TPM1-232ENST00000561425 ABCC2Q92887 1545 aa34.58■■■■□ 3.13
TPM1-232ENST00000561425 ABCC10Q5T3U5 1492 aa34.58■■■■□ 3.13
TPM1-232ENST00000561425 FAM9AQ8IZU1 332 aaPredicted RBP34.51■■■■□ 3.12
TPM1-232ENST00000561425 KIF13AQ9H1H9 1805 aa34.51■■■■□ 3.11
TPM1-232ENST00000561425 FAM69CQ0P6D2 419 aa34.48■■■■□ 3.11
TPM1-232ENST00000561425 KDM5BQ9UGL1 1544 aa34.46■■■■□ 3.11
TPM1-232ENST00000561425 DIP2BQ9P265 1576 aa34.44■■■■□ 3.1
TPM1-232ENST00000561425 KIF21BO75037 1637 aa34.42■■■■□ 3.1
TPM1-232ENST00000561425 PLB1Q6P1J6 1458 aa34.39■■■■□ 3.1
TPM1-232ENST00000561425 ASXL2Q76L83 1435 aa34.38■■■■□ 3.09
TPM1-232ENST00000561425 ABCA8O94911 1581 aa34.36■■■■□ 3.09
TPM1-232ENST00000561425 SAMD9Q5K651 1589 aa34.34■■■■□ 3.09
TPM1-232ENST00000561425 P3H3Q8IVL6 736 aa34.29■■■■□ 3.08
TPM1-232ENST00000561425 ZCCHC11Q5TAX3 1644 aaKnown RBP34.26■■■■□ 3.08
TPM1-232ENST00000561425 GLI2P10070 1586 aa34.26■■■■□ 3.07
TPM1-232ENST00000561425 EPRSP07814 1512 aaKnown RBP34.2■■■■□ 3.06
TPM1-232ENST00000561425 WDR7Q9Y4E6 1490 aa34.14■■■■□ 3.06
TPM1-232ENST00000561425 EFCAB5A4FU69 1503 aa34.11■■■■□ 3.05
TPM1-232ENST00000561425 UBTFP17480 764 aaKnown RBP34.11■■■■□ 3.05
TPM1-232ENST00000561425 ATP10BO94823 1461 aa34.11■■■■□ 3.05
TPM1-232ENST00000561425 RANGAP1P46060 587 aaPredicted RBP34.09■■■■□ 3.05
TPM1-232ENST00000561425 FHOD3Q2V2M9 1422 aa34.09■■■■□ 3.05
TPM1-232ENST00000561425 RAPGEF6Q8TEU7 1601 aa34.03■■■■□ 3.04
TPM1-232ENST00000561425 MAP3K4Q9Y6R4 1608 aa34.02■■■■□ 3.04
TPM1-232ENST00000561425 PPRC1Q5VV67 1664 aaKnown RBP34.02■■■■□ 3.04
TPM1-232ENST00000561425 TSPOAP1O95153 1857 aa34.01■■■■□ 3.04
TPM1-232ENST00000561425 EHMT2Q96KQ7 1210 aa34.01■■■■□ 3.03
TPM1-232ENST00000561425 NUP153P49790 1475 aaKnown RBP33.98■■■■□ 3.03
TPM1-232ENST00000561425 ARID3CA6NKF2 412 aa33.94■■■■□ 3.02
TPM1-232ENST00000561425 KCNH8Q96L42 1107 aa33.94■■■■□ 3.02
TPM1-232ENST00000561425 ARHGAP35Q9NRY4 1499 aa33.93■■■■□ 3.02
TPM1-232ENST00000561425 KDM6BO15054 1643 aa33.93■■■■□ 3.02
TPM1-232ENST00000561425 TEX14Q8IWB6 1497 aa33.89■■■■□ 3.02
TPM1-232ENST00000561425 MAGI3Q5TCQ9 1506 aa33.88■■■■□ 3.01
TPM1-232ENST00000561425 CD109Q6YHK3 1445 aa33.87■■■■□ 3.01
TPM1-232ENST00000561425 COL17A1Q9UMD9 1497 aaPredicted RBP33.84■■■■□ 3.01
TPM1-232ENST00000561425 CFAP43Q8NDM7 1665 aa33.84■■■■□ 3.01
TPM1-232ENST00000561425 FMN1Q68DA7 1419 aa33.82■■■■□ 3
TPM1-232ENST00000561425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.79■■■■□ 3
TPM1-232ENST00000561425 HNRNPUL2Q1KMD3 747 aaKnown RBP33.79■■■■□ 3
TPM1-232ENST00000561425 PLEKHD1A6NEE1 506 aa33.75■■■□□ 2.99
TPM1-232ENST00000561425 ABCA9Q8IUA7 1624 aa33.75■■■□□ 2.99
TPM1-232ENST00000561425 PHLDB1Q86UU1 1377 aa33.63■■■□□ 2.97
TPM1-232ENST00000561425 CDK13Q14004 1512 aaKnown RBP33.63■■■□□ 2.97
TPM1-232ENST00000561425 HECW1Q76N89 1606 aa33.61■■■□□ 2.97
TPM1-232ENST00000561425 ARAP3Q8WWN8 1544 aa33.6■■■□□ 2.97
TPM1-232ENST00000561425 CLIP1P30622 1438 aa33.56■■■□□ 2.96
TPM1-232ENST00000561425 ATP1B4Q9UN42 357 aaPredicted RBP33.55■■■□□ 2.96
TPM1-232ENST00000561425 CASKIN1Q8WXD9 1431 aa33.54■■■□□ 2.96
TPM1-232ENST00000561425 NEO1Q92859 1461 aa33.54■■■□□ 2.96
TPM1-232ENST00000561425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.53■■■□□ 2.96
TPM1-232ENST00000561425 CDK11AQ9UQ88 783 aaPredicted RBP33.51■■■□□ 2.95
TPM1-232ENST00000561425 AEBP2Q6ZN18 517 aaPredicted RBP33.5■■■□□ 2.95
TPM1-232ENST00000561425 KDM4FA0A1W2PPD8 638 aa33.47■■■□□ 2.95
TPM1-232ENST00000561425 TROQ12816 1431 aaPredicted RBP33.43■■■□□ 2.94
TPM1-232ENST00000561425 PCF11O94913 1555 aaKnown RBP33.43■■■□□ 2.94
TPM1-232ENST00000561425 TTC37Q6PGP7 1564 aa33.43■■■□□ 2.94
TPM1-232ENST00000561425 LRRIQ1Q96JM4 1722 aa33.42■■■□□ 2.94
TPM1-232ENST00000561425 PLCH2O75038 1416 aa33.4■■■□□ 2.94
TPM1-232ENST00000561425 CCDC18Q5T9S5 1454 aa33.39■■■□□ 2.94
TPM1-232ENST00000561425 FYCO1Q9BQS8 1478 aa33.39■■■□□ 2.94
TPM1-232ENST00000561425 FANCAO15360 1455 aa33.37■■■□□ 2.93
TPM1-232ENST00000561425 AKNAQ7Z591 1439 aa33.36■■■□□ 2.93
TPM1-232ENST00000561425 RAPGEF3O95398 923 aa33.36■■■□□ 2.93
TPM1-232ENST00000561425 CEP162Q5TB80 1403 aa33.33■■■□□ 2.93
TPM1-232ENST00000561425 KIF14Q15058 1648 aa33.3■■■□□ 2.92
TPM1-232ENST00000561425 LOC105371045A0A1W2PR82 267 aa33.29■■■□□ 2.92
TPM1-232ENST00000561425 CFAP74Q9C0B2 1584 aa33.29■■■□□ 2.92
TPM1-232ENST00000561425 FRMPD1Q5SYB0 1578 aa33.28■■■□□ 2.92
TPM1-232ENST00000561425 DENND4BO75064 1496 aaPredicted RBP33.27■■■□□ 2.92
TPM1-232ENST00000561425 ADGRL1O94910 1474 aa33.25■■■□□ 2.91
TPM1-232ENST00000561425 EFCAB2Q5VUJ9 269 aa33.24■■■□□ 2.91
TPM1-232ENST00000561425 RICTORQ6R327 1708 aa33.18■■■□□ 2.9
TPM1-232ENST00000561425 MYO5CQ9NQX4 1742 aa33.18■■■□□ 2.9
TPM1-232ENST00000561425 SCAPERQ9BY12 1400 aa33.17■■■□□ 2.9
TPM1-232ENST00000561425 ZMYM4Q5VZL5 1548 aa33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms