RNA–Protein interactions for RNA: ENST00000561278.1

SHF-211, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-211ENST00000561278 RUSC2Q8N2Y8 1516 aa21.66■■□□□ 1.06
SHF-211ENST00000561278 CUL7Q14999 1698 aa21.65■■□□□ 1.06
SHF-211ENST00000561278 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
SHF-211ENST00000561278 IGF1RP08069 1367 aa21.61■■□□□ 1.05
SHF-211ENST00000561278 JPH4Q96JJ6 628 aa21.59■■□□□ 1.05
SHF-211ENST00000561278 KIAA0586Q9BVV6 1533 aa21.52■■□□□ 1.04
SHF-211ENST00000561278 CARMIL1Q5VZK9 1371 aa21.51■■□□□ 1.03
SHF-211ENST00000561278 IQGAP2Q13576 1575 aa21.39■■□□□ 1.01
SHF-211ENST00000561278 ADCY10Q96PN6 1610 aa21.37■■□□□ 1.01
SHF-211ENST00000561278 TTBK1Q5TCY1 1321 aaPredicted RBP21.36■■□□□ 1.01
SHF-211ENST00000561278 NPM1P06748 294 aaKnown RBP eCLIP21.36■■□□□ 1.01
SHF-211ENST00000561278 RAPGEF2Q9Y4G8 1499 aa21.36■■□□□ 1.01
SHF-211ENST00000561278 CARMIL2Q6F5E8 1435 aa21.34■■□□□ 1.01
SHF-211ENST00000561278 PTPRGP23470 1445 aa21.3■■□□□ 1
SHF-211ENST00000561278 KIF13AQ9H1H9 1805 aa21.29■■□□□ 1
SHF-211ENST00000561278 MAPKBP1O60336 1514 aa21.29■■□□□ 1
SHF-211ENST00000561278 TNIKQ9UKE5 1360 aa21.28■■□□□ 1
SHF-211ENST00000561278 PHF23Q9BUL5 403 aaPredicted RBP21.25■□□□□ 0.99
SHF-211ENST00000561278 ABCC10Q5T3U5 1492 aa21.24■□□□□ 0.99
SHF-211ENST00000561278 FAM69CQ0P6D2 419 aa21.23■□□□□ 0.99
SHF-211ENST00000561278 DISP1Q96F81 1524 aa21.23■□□□□ 0.99
SHF-211ENST00000561278 DIP2BQ9P265 1576 aa21.22■□□□□ 0.99
SHF-211ENST00000561278 UGGT2Q9NYU1 1516 aa21.21■□□□□ 0.99
SHF-211ENST00000561278 CTTNBP2Q8WZ74 1663 aa21.21■□□□□ 0.99
SHF-211ENST00000561278 KIAA0556O60303 1618 aa21.18■□□□□ 0.98
SHF-211ENST00000561278 ABCC2Q92887 1545 aa21.18■□□□□ 0.98
SHF-211ENST00000561278 UACAQ9BZF9 1416 aa21.15■□□□□ 0.98
SHF-211ENST00000561278 PRXQ9BXM0 1461 aa21.14■□□□□ 0.98
SHF-211ENST00000561278 UHRF1BP1LA0JNW5 1464 aa21.13■□□□□ 0.97
SHF-211ENST00000561278 GOLGA3Q08378 1498 aa21.09■□□□□ 0.97
SHF-211ENST00000561278 ASXL2Q76L83 1435 aa21.09■□□□□ 0.97
SHF-211ENST00000561278 TSPOAP1O95153 1857 aa21.07■□□□□ 0.96
SHF-211ENST00000561278 PLB1Q6P1J6 1458 aa21.07■□□□□ 0.96
SHF-211ENST00000561278 ZCCHC11Q5TAX3 1644 aaKnown RBP21.04■□□□□ 0.96
SHF-211ENST00000561278 KDM5BQ9UGL1 1544 aa21.04■□□□□ 0.96
SHF-211ENST00000561278 CSRNP3Q8WYN3 585 aa21.03■□□□□ 0.96
SHF-211ENST00000561278 KDM6BO15054 1643 aa21.02■□□□□ 0.96
SHF-211ENST00000561278 EEA1Q15075 1411 aa21■□□□□ 0.95
SHF-211ENST00000561278 GLI2P10070 1586 aa20.97■□□□□ 0.95
SHF-211ENST00000561278 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
SHF-211ENST00000561278 EPRSP07814 1512 aaKnown RBP20.96■□□□□ 0.95
SHF-211ENST00000561278 ABCA8O94911 1581 aa20.94■□□□□ 0.94
SHF-211ENST00000561278 P3H3Q8IVL6 736 aa20.94■□□□□ 0.94
SHF-211ENST00000561278 WDR7Q9Y4E6 1490 aa20.93■□□□□ 0.94
SHF-211ENST00000561278 PPRC1Q5VV67 1664 aaKnown RBP20.91■□□□□ 0.94
SHF-211ENST00000561278 MAP3K4Q9Y6R4 1608 aa20.89■□□□□ 0.94
SHF-211ENST00000561278 RANGAP1P46060 587 aaPredicted RBP20.89■□□□□ 0.93
SHF-211ENST00000561278 SAMD9Q5K651 1589 aa20.89■□□□□ 0.93
SHF-211ENST00000561278 ARID3CA6NKF2 412 aa20.86■□□□□ 0.93
SHF-211ENST00000561278 TEX14Q8IWB6 1497 aa20.86■□□□□ 0.93
SHF-211ENST00000561278 KIF21BO75037 1637 aa20.83■□□□□ 0.93
SHF-211ENST00000561278 KCNH8Q96L42 1107 aa20.82■□□□□ 0.92
SHF-211ENST00000561278 RAPGEF6Q8TEU7 1601 aa20.79■□□□□ 0.92
SHF-211ENST00000561278 EHMT2Q96KQ7 1210 aa20.79■□□□□ 0.92
SHF-211ENST00000561278 FHOD3Q2V2M9 1422 aa20.78■□□□□ 0.92
SHF-211ENST00000561278 CFAP43Q8NDM7 1665 aa20.78■□□□□ 0.92
SHF-211ENST00000561278 CD109Q6YHK3 1445 aa20.77■□□□□ 0.91
SHF-211ENST00000561278 ATP10BO94823 1461 aa20.76■□□□□ 0.91
SHF-211ENST00000561278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.75■□□□□ 0.91
SHF-211ENST00000561278 HNRNPUL2Q1KMD3 747 aaKnown RBP20.75■□□□□ 0.91
SHF-211ENST00000561278 COL17A1Q9UMD9 1497 aaPredicted RBP20.74■□□□□ 0.91
SHF-211ENST00000561278 EFCAB5A4FU69 1503 aa20.73■□□□□ 0.91
SHF-211ENST00000561278 MAGI3Q5TCQ9 1506 aa20.72■□□□□ 0.91
SHF-211ENST00000561278 UBTFP17480 764 aaKnown RBP20.7■□□□□ 0.9
SHF-211ENST00000561278 NUP153P49790 1475 aaKnown RBP20.69■□□□□ 0.9
SHF-211ENST00000561278 KDM4FA0A1W2PPD8 638 aa20.65■□□□□ 0.9
SHF-211ENST00000561278 ABCA9Q8IUA7 1624 aa20.64■□□□□ 0.9
SHF-211ENST00000561278 ADGRL1O94910 1474 aa20.61■□□□□ 0.89
SHF-211ENST00000561278 PLEKHD1A6NEE1 506 aa20.56■□□□□ 0.88
SHF-211ENST00000561278 CDK13Q14004 1512 aaKnown RBP20.55■□□□□ 0.88
SHF-211ENST00000561278 ATP1B4Q9UN42 357 aaPredicted RBP20.55■□□□□ 0.88
SHF-211ENST00000561278 ARHGAP35Q9NRY4 1499 aa20.55■□□□□ 0.88
SHF-211ENST00000561278 FMN1Q68DA7 1419 aa20.54■□□□□ 0.88
SHF-211ENST00000561278 ARAP3Q8WWN8 1544 aa20.54■□□□□ 0.88
SHF-211ENST00000561278 HECW1Q76N89 1606 aa20.53■□□□□ 0.88
SHF-211ENST00000561278 NEO1Q92859 1461 aa20.51■□□□□ 0.87
SHF-211ENST00000561278 PHLDB1Q86UU1 1377 aa20.5■□□□□ 0.87
SHF-211ENST00000561278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.48■□□□□ 0.87
SHF-211ENST00000561278 TTC37Q6PGP7 1564 aa20.48■□□□□ 0.87
SHF-211ENST00000561278 RAPGEF3O95398 923 aa20.46■□□□□ 0.87
SHF-211ENST00000561278 CFAP74Q9C0B2 1584 aa20.45■□□□□ 0.86
SHF-211ENST00000561278 FANCAO15360 1455 aa20.43■□□□□ 0.86
SHF-211ENST00000561278 FRMPD1Q5SYB0 1578 aa20.42■□□□□ 0.86
SHF-211ENST00000561278 AKNAQ7Z591 1439 aa20.4■□□□□ 0.86
SHF-211ENST00000561278 DENND4BO75064 1496 aaPredicted RBP20.39■□□□□ 0.85
SHF-211ENST00000561278 CDK11AQ9UQ88 783 aaPredicted RBP20.39■□□□□ 0.85
SHF-211ENST00000561278 PCF11O94913 1555 aaKnown RBP20.38■□□□□ 0.85
SHF-211ENST00000561278 KIF14Q15058 1648 aa20.37■□□□□ 0.85
SHF-211ENST00000561278 RICTORQ6R327 1708 aa20.35■□□□□ 0.85
SHF-211ENST00000561278 LRRIQ1Q96JM4 1722 aa20.35■□□□□ 0.85
SHF-211ENST00000561278 CLIP1P30622 1438 aa20.35■□□□□ 0.85
SHF-211ENST00000561278 MYO5CQ9NQX4 1742 aa20.33■□□□□ 0.85
SHF-211ENST00000561278 ARHGEF40Q8TER5 1519 aa20.33■□□□□ 0.85
SHF-211ENST00000561278 PLCH2O75038 1416 aa20.33■□□□□ 0.84
SHF-211ENST00000561278 TROQ12816 1431 aaPredicted RBP20.33■□□□□ 0.84
SHF-211ENST00000561278 ARID4BQ4LE39 1312 aaPredicted RBP20.32■□□□□ 0.84
SHF-211ENST00000561278 CCDC18Q5T9S5 1454 aa20.31■□□□□ 0.84
SHF-211ENST00000561278 CASKIN1Q8WXD9 1431 aa20.31■□□□□ 0.84
SHF-211ENST00000561278 ZMYM4Q5VZL5 1548 aa20.28■□□□□ 0.84
SHF-211ENST00000561278 HECW2Q9P2P5 1572 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms