RNA–Protein interactions for RNA: ENST00000561088.1

SPG21-214, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-214ENST00000561088 CARMIL1Q5VZK9 1371 aa20.88■□□□□ 0.93
SPG21-214ENST00000561088 PRG4Q92954 1404 aaPredicted RBP20.86■□□□□ 0.93
SPG21-214ENST00000561088 JPH4Q96JJ6 628 aa20.84■□□□□ 0.93
SPG21-214ENST00000561088 TRHP20396 242 aaPredicted RBP20.83■□□□□ 0.93
SPG21-214ENST00000561088 KIAA0586Q9BVV6 1533 aa20.82■□□□□ 0.92
SPG21-214ENST00000561088 RAPGEF2Q9Y4G8 1499 aa20.75■□□□□ 0.91
SPG21-214ENST00000561088 IQGAP2Q13576 1575 aa20.72■□□□□ 0.91
SPG21-214ENST00000561088 CARMIL2Q6F5E8 1435 aa20.66■□□□□ 0.9
SPG21-214ENST00000561088 TTBK1Q5TCY1 1321 aaPredicted RBP20.64■□□□□ 0.89
SPG21-214ENST00000561088 CTTNBP2Q8WZ74 1663 aa20.63■□□□□ 0.89
SPG21-214ENST00000561088 NPM1P06748 294 aaKnown RBP eCLIP20.59■□□□□ 0.89
SPG21-214ENST00000561088 PTPRGP23470 1445 aa20.58■□□□□ 0.88
SPG21-214ENST00000561088 PRXQ9BXM0 1461 aa20.57■□□□□ 0.88
SPG21-214ENST00000561088 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
SPG21-214ENST00000561088 ADCY10Q96PN6 1610 aa20.56■□□□□ 0.88
SPG21-214ENST00000561088 EEA1Q15075 1411 aa20.54■□□□□ 0.88
SPG21-214ENST00000561088 UGGT2Q9NYU1 1516 aa20.54■□□□□ 0.88
SPG21-214ENST00000561088 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
SPG21-214ENST00000561088 DISP1Q96F81 1524 aa20.53■□□□□ 0.88
SPG21-214ENST00000561088 FAM9AQ8IZU1 332 aaPredicted RBP20.52■□□□□ 0.88
SPG21-214ENST00000561088 KIAA0556O60303 1618 aa20.51■□□□□ 0.87
SPG21-214ENST00000561088 GOLGA3Q08378 1498 aa20.47■□□□□ 0.87
SPG21-214ENST00000561088 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
SPG21-214ENST00000561088 MAPKBP1O60336 1514 aa20.46■□□□□ 0.87
SPG21-214ENST00000561088 KIF13AQ9H1H9 1805 aa20.44■□□□□ 0.86
SPG21-214ENST00000561088 UACAQ9BZF9 1416 aa20.43■□□□□ 0.86
SPG21-214ENST00000561088 ABCC2Q92887 1545 aa20.42■□□□□ 0.86
SPG21-214ENST00000561088 UHRF1BP1LA0JNW5 1464 aa20.39■□□□□ 0.85
SPG21-214ENST00000561088 FAM69CQ0P6D2 419 aa20.39■□□□□ 0.85
SPG21-214ENST00000561088 ABCC10Q5T3U5 1492 aa20.38■□□□□ 0.85
SPG21-214ENST00000561088 DIP2BQ9P265 1576 aa20.37■□□□□ 0.85
SPG21-214ENST00000561088 KIF21BO75037 1637 aa20.36■□□□□ 0.85
SPG21-214ENST00000561088 RANGAP1P46060 587 aaPredicted RBP20.34■□□□□ 0.85
SPG21-214ENST00000561088 P3H3Q8IVL6 736 aa20.33■□□□□ 0.85
SPG21-214ENST00000561088 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
SPG21-214ENST00000561088 ASXL2Q76L83 1435 aa20.32■□□□□ 0.84
SPG21-214ENST00000561088 ZCCHC11Q5TAX3 1644 aaKnown RBP20.31■□□□□ 0.84
SPG21-214ENST00000561088 PLB1Q6P1J6 1458 aa20.31■□□□□ 0.84
SPG21-214ENST00000561088 KDM5BQ9UGL1 1544 aa20.29■□□□□ 0.84
SPG21-214ENST00000561088 TSPOAP1O95153 1857 aa20.28■□□□□ 0.84
SPG21-214ENST00000561088 SAMD9Q5K651 1589 aa20.28■□□□□ 0.84
SPG21-214ENST00000561088 ABCA8O94911 1581 aa20.26■□□□□ 0.83
SPG21-214ENST00000561088 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
SPG21-214ENST00000561088 ARID3CA6NKF2 412 aa20.2■□□□□ 0.82
SPG21-214ENST00000561088 GLI2P10070 1586 aa20.19■□□□□ 0.82
SPG21-214ENST00000561088 FHOD3Q2V2M9 1422 aa20.19■□□□□ 0.82
SPG21-214ENST00000561088 WDR7Q9Y4E6 1490 aa20.18■□□□□ 0.82
SPG21-214ENST00000561088 EFCAB5A4FU69 1503 aa20.18■□□□□ 0.82
SPG21-214ENST00000561088 EPRSP07814 1512 aaKnown RBP20.17■□□□□ 0.82
SPG21-214ENST00000561088 RAPGEF6Q8TEU7 1601 aa20.17■□□□□ 0.82
SPG21-214ENST00000561088 KDM6BO15054 1643 aa20.15■□□□□ 0.82
SPG21-214ENST00000561088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.12■□□□□ 0.81
SPG21-214ENST00000561088 HNRNPUL2Q1KMD3 747 aaKnown RBP20.12■□□□□ 0.81
SPG21-214ENST00000561088 KCNH8Q96L42 1107 aa20.12■□□□□ 0.81
SPG21-214ENST00000561088 MAP3K4Q9Y6R4 1608 aa20.12■□□□□ 0.81
SPG21-214ENST00000561088 PPRC1Q5VV67 1664 aaKnown RBP20.1■□□□□ 0.81
SPG21-214ENST00000561088 ATP10BO94823 1461 aa20.09■□□□□ 0.81
SPG21-214ENST00000561088 TEX14Q8IWB6 1497 aa20.08■□□□□ 0.81
SPG21-214ENST00000561088 CFAP43Q8NDM7 1665 aa20.06■□□□□ 0.8
SPG21-214ENST00000561088 NUP153P49790 1475 aaKnown RBP20.05■□□□□ 0.8
SPG21-214ENST00000561088 CD109Q6YHK3 1445 aa20.02■□□□□ 0.8
SPG21-214ENST00000561088 ARHGAP35Q9NRY4 1499 aa20.01■□□□□ 0.79
SPG21-214ENST00000561088 ATP1B4Q9UN42 357 aaPredicted RBP20■□□□□ 0.79
SPG21-214ENST00000561088 FMN1Q68DA7 1419 aa20■□□□□ 0.79
SPG21-214ENST00000561088 HECW1Q76N89 1606 aa19.96■□□□□ 0.79
SPG21-214ENST00000561088 MAGI3Q5TCQ9 1506 aa19.96■□□□□ 0.79
SPG21-214ENST00000561088 PLEKHD1A6NEE1 506 aa19.95■□□□□ 0.78
SPG21-214ENST00000561088 ABCA9Q8IUA7 1624 aa19.94■□□□□ 0.78
SPG21-214ENST00000561088 CDK13Q14004 1512 aaKnown RBP19.93■□□□□ 0.78
SPG21-214ENST00000561088 COL17A1Q9UMD9 1497 aaPredicted RBP19.88■□□□□ 0.77
SPG21-214ENST00000561088 CLIP1P30622 1438 aa19.87■□□□□ 0.77
SPG21-214ENST00000561088 PCF11O94913 1555 aaKnown RBP19.84■□□□□ 0.77
SPG21-214ENST00000561088 CDK11AQ9UQ88 783 aaPredicted RBP19.84■□□□□ 0.77
SPG21-214ENST00000561088 TTC37Q6PGP7 1564 aa19.82■□□□□ 0.76
SPG21-214ENST00000561088 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.81■□□□□ 0.76
SPG21-214ENST00000561088 NEO1Q92859 1461 aa19.8■□□□□ 0.76
SPG21-214ENST00000561088 PHLDB1Q86UU1 1377 aa19.8■□□□□ 0.76
SPG21-214ENST00000561088 LRRIQ1Q96JM4 1722 aa19.79■□□□□ 0.76
SPG21-214ENST00000561088 CASKIN1Q8WXD9 1431 aa19.79■□□□□ 0.76
SPG21-214ENST00000561088 ARAP3Q8WWN8 1544 aa19.79■□□□□ 0.76
SPG21-214ENST00000561088 CFAP74Q9C0B2 1584 aa19.78■□□□□ 0.76
SPG21-214ENST00000561088 KIF14Q15058 1648 aa19.78■□□□□ 0.76
SPG21-214ENST00000561088 CCDC18Q5T9S5 1454 aa19.78■□□□□ 0.76
SPG21-214ENST00000561088 FYCO1Q9BQS8 1478 aa19.77■□□□□ 0.76
SPG21-214ENST00000561088 FANCAO15360 1455 aa19.75■□□□□ 0.75
SPG21-214ENST00000561088 TROQ12816 1431 aaPredicted RBP19.74■□□□□ 0.75
SPG21-214ENST00000561088 MYO5CQ9NQX4 1742 aa19.73■□□□□ 0.75
SPG21-214ENST00000561088 CEP162Q5TB80 1403 aa19.73■□□□□ 0.75
SPG21-214ENST00000561088 RAPGEF3O95398 923 aa19.71■□□□□ 0.75
SPG21-214ENST00000561088 AKNAQ7Z591 1439 aa19.7■□□□□ 0.74
SPG21-214ENST00000561088 ADGRL1O94910 1474 aa19.7■□□□□ 0.74
SPG21-214ENST00000561088 DENND4BO75064 1496 aaPredicted RBP19.68■□□□□ 0.74
SPG21-214ENST00000561088 KDM4FA0A1W2PPD8 638 aa19.68■□□□□ 0.74
SPG21-214ENST00000561088 PLCH2O75038 1416 aa19.68■□□□□ 0.74
SPG21-214ENST00000561088 FRMPD1Q5SYB0 1578 aa19.66■□□□□ 0.74
SPG21-214ENST00000561088 ARHGAP5Q13017 1502 aa19.66■□□□□ 0.74
SPG21-214ENST00000561088 LOC105371045A0A1W2PR82 267 aa19.65■□□□□ 0.74
SPG21-214ENST00000561088 EFCAB2Q5VUJ9 269 aa19.64■□□□□ 0.73
SPG21-214ENST00000561088 RICTORQ6R327 1708 aa19.64■□□□□ 0.73
SPG21-214ENST00000561088 SCAPERQ9BY12 1400 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms