RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
PSME1-208ENST00000561059 KIAA0586Q9BVV6 1533 aa23.33■■□□□ 1.32
PSME1-208ENST00000561059 CUL7Q14999 1698 aa23.31■■□□□ 1.32
PSME1-208ENST00000561059 TTBK1Q5TCY1 1321 aaPredicted RBP23.31■■□□□ 1.32
PSME1-208ENST00000561059 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
PSME1-208ENST00000561059 NPM1P06748 294 aaKnown RBP eCLIP23.26■■□□□ 1.31
PSME1-208ENST00000561059 ADCY10Q96PN6 1610 aa23.26■■□□□ 1.31
PSME1-208ENST00000561059 KIF13AQ9H1H9 1805 aa23.25■■□□□ 1.31
PSME1-208ENST00000561059 AEBP2Q6ZN18 517 aaPredicted RBP23.25■■□□□ 1.31
PSME1-208ENST00000561059 FAM69CQ0P6D2 419 aa23.24■■□□□ 1.31
PSME1-208ENST00000561059 ABCC10Q5T3U5 1492 aa23.18■■□□□ 1.3
PSME1-208ENST00000561059 PTPRGP23470 1445 aa23.16■■□□□ 1.3
PSME1-208ENST00000561059 MAPKBP1O60336 1514 aa23.15■■□□□ 1.3
PSME1-208ENST00000561059 DIP2BQ9P265 1576 aa23.13■■□□□ 1.29
PSME1-208ENST00000561059 IQGAP2Q13576 1575 aa23.1■■□□□ 1.29
PSME1-208ENST00000561059 TNIKQ9UKE5 1360 aa23.1■■□□□ 1.29
PSME1-208ENST00000561059 CARMIL2Q6F5E8 1435 aa23.09■■□□□ 1.29
PSME1-208ENST00000561059 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
PSME1-208ENST00000561059 DISP1Q96F81 1524 aa23.03■■□□□ 1.28
PSME1-208ENST00000561059 ABCC2Q92887 1545 aa23■■□□□ 1.27
PSME1-208ENST00000561059 TSPOAP1O95153 1857 aa23■■□□□ 1.27
PSME1-208ENST00000561059 ASXL2Q76L83 1435 aa22.98■■□□□ 1.27
PSME1-208ENST00000561059 UACAQ9BZF9 1416 aa22.97■■□□□ 1.27
PSME1-208ENST00000561059 UGGT2Q9NYU1 1516 aa22.94■■□□□ 1.26
PSME1-208ENST00000561059 KDM6BO15054 1643 aa22.93■■□□□ 1.26
PSME1-208ENST00000561059 UHRF1BP1LA0JNW5 1464 aa22.92■■□□□ 1.26
PSME1-208ENST00000561059 KIAA0556O60303 1618 aa22.9■■□□□ 1.26
PSME1-208ENST00000561059 PLB1Q6P1J6 1458 aa22.89■■□□□ 1.25
PSME1-208ENST00000561059 KDM5BQ9UGL1 1544 aa22.84■■□□□ 1.25
PSME1-208ENST00000561059 ZCCHC11Q5TAX3 1644 aaKnown RBP22.82■■□□□ 1.24
PSME1-208ENST00000561059 PPRC1Q5VV67 1664 aaKnown RBP22.81■■□□□ 1.24
PSME1-208ENST00000561059 CTTNBP2Q8WZ74 1663 aa22.81■■□□□ 1.24
PSME1-208ENST00000561059 GLI2P10070 1586 aa22.81■■□□□ 1.24
PSME1-208ENST00000561059 EPRSP07814 1512 aaKnown RBP22.81■■□□□ 1.24
PSME1-208ENST00000561059 PRXQ9BXM0 1461 aa22.8■■□□□ 1.24
PSME1-208ENST00000561059 KDM4FA0A1W2PPD8 638 aa22.79■■□□□ 1.24
PSME1-208ENST00000561059 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
PSME1-208ENST00000561059 GOLGA3Q08378 1498 aa22.74■■□□□ 1.23
PSME1-208ENST00000561059 ARID3CA6NKF2 412 aa22.74■■□□□ 1.23
PSME1-208ENST00000561059 COL17A1Q9UMD9 1497 aaPredicted RBP22.73■■□□□ 1.23
PSME1-208ENST00000561059 WDR7Q9Y4E6 1490 aa22.72■■□□□ 1.23
PSME1-208ENST00000561059 MAP3K4Q9Y6R4 1608 aa22.71■■□□□ 1.23
PSME1-208ENST00000561059 KCNH8Q96L42 1107 aa22.71■■□□□ 1.23
PSME1-208ENST00000561059 ABCA8O94911 1581 aa22.7■■□□□ 1.22
PSME1-208ENST00000561059 CSRNP3Q8WYN3 585 aa22.67■■□□□ 1.22
PSME1-208ENST00000561059 RANGAP1P46060 587 aaPredicted RBP22.65■■□□□ 1.22
PSME1-208ENST00000561059 TEX14Q8IWB6 1497 aa22.64■■□□□ 1.21
PSME1-208ENST00000561059 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
PSME1-208ENST00000561059 CD109Q6YHK3 1445 aa22.6■■□□□ 1.21
PSME1-208ENST00000561059 ADGRL1O94910 1474 aa22.58■■□□□ 1.2
PSME1-208ENST00000561059 ATP10BO94823 1461 aa22.54■■□□□ 1.2
PSME1-208ENST00000561059 MAGI3Q5TCQ9 1506 aa22.52■■□□□ 1.19
PSME1-208ENST00000561059 SAMD9Q5K651 1589 aa22.51■■□□□ 1.19
PSME1-208ENST00000561059 CFAP43Q8NDM7 1665 aa22.51■■□□□ 1.19
PSME1-208ENST00000561059 EHMT2Q96KQ7 1210 aa22.5■■□□□ 1.19
PSME1-208ENST00000561059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
PSME1-208ENST00000561059 HNRNPUL2Q1KMD3 747 aaKnown RBP22.49■■□□□ 1.19
PSME1-208ENST00000561059 FHOD3Q2V2M9 1422 aa22.48■■□□□ 1.19
PSME1-208ENST00000561059 EEA1Q15075 1411 aa22.46■■□□□ 1.19
PSME1-208ENST00000561059 RAPGEF6Q8TEU7 1601 aa22.44■■□□□ 1.18
PSME1-208ENST00000561059 NUP153P49790 1475 aaKnown RBP22.4■■□□□ 1.18
PSME1-208ENST00000561059 ABCA9Q8IUA7 1624 aa22.36■■□□□ 1.17
PSME1-208ENST00000561059 RAPGEF3O95398 923 aa22.35■■□□□ 1.17
PSME1-208ENST00000561059 ARAP3Q8WWN8 1544 aa22.34■■□□□ 1.17
PSME1-208ENST00000561059 KIF21BO75037 1637 aa22.34■■□□□ 1.17
PSME1-208ENST00000561059 UBTFP17480 764 aaKnown RBP22.29■■□□□ 1.16
PSME1-208ENST00000561059 PLEKHD1A6NEE1 506 aa22.28■■□□□ 1.16
PSME1-208ENST00000561059 CHIC1Q5VXU3 224 aa22.28■■□□□ 1.16
PSME1-208ENST00000561059 HECW2Q9P2P5 1572 aa22.26■■□□□ 1.15
PSME1-208ENST00000561059 EFCAB5A4FU69 1503 aa22.26■■□□□ 1.15
PSME1-208ENST00000561059 NEO1Q92859 1461 aa22.25■■□□□ 1.15
PSME1-208ENST00000561059 ATP1B4Q9UN42 357 aaPredicted RBP22.24■■□□□ 1.15
PSME1-208ENST00000561059 CDK13Q14004 1512 aaKnown RBP22.24■■□□□ 1.15
PSME1-208ENST00000561059 PHLDB1Q86UU1 1377 aa22.24■■□□□ 1.15
PSME1-208ENST00000561059 FRMPD1Q5SYB0 1578 aa22.22■■□□□ 1.15
PSME1-208ENST00000561059 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.19■■□□□ 1.145e-7■■■□□ 17.8
PSME1-208ENST00000561059 TTC37Q6PGP7 1564 aa22.18■■□□□ 1.14
PSME1-208ENST00000561059 ARID4BQ4LE39 1312 aaPredicted RBP22.18■■□□□ 1.14
PSME1-208ENST00000561059 AKNAQ7Z591 1439 aa22.16■■□□□ 1.14
PSME1-208ENST00000561059 FANCAO15360 1455 aa22.15■■□□□ 1.14
PSME1-208ENST00000561059 DENND4BO75064 1496 aaPredicted RBP22.15■■□□□ 1.14
PSME1-208ENST00000561059 ARHGAP35Q9NRY4 1499 aa22.15■■□□□ 1.14
PSME1-208ENST00000561059 ILDR1Q86SU0 546 aaPredicted RBP22.14■■□□□ 1.13
PSME1-208ENST00000561059 PTPRMP28827 1452 aa22.1■■□□□ 1.13
PSME1-208ENST00000561059 ADAMTSL3P82987 1691 aa22.09■■□□□ 1.13
PSME1-208ENST00000561059 FMN1Q68DA7 1419 aa22.08■■□□□ 1.13
PSME1-208ENST00000561059 RICTORQ6R327 1708 aa22.08■■□□□ 1.12
PSME1-208ENST00000561059 ARHGEF40Q8TER5 1519 aa22.07■■□□□ 1.12
PSME1-208ENST00000561059 PLPPR3Q6T4P5 718 aa22.06■■□□□ 1.12
PSME1-208ENST00000561059 HECW1Q76N89 1606 aa22.06■■□□□ 1.12
PSME1-208ENST00000561059 MADDQ8WXG6 1647 aa22.06■■□□□ 1.12
PSME1-208ENST00000561059 YEATS2Q9ULM3 1422 aa22.06■■□□□ 1.12
PSME1-208ENST00000561059 CFAP74Q9C0B2 1584 aa22.05■■□□□ 1.12
PSME1-208ENST00000561059 BCORL1Q5H9F3 1711 aa22.05■■□□□ 1.12
PSME1-208ENST00000561059 PLCH2O75038 1416 aa22.03■■□□□ 1.12
PSME1-208ENST00000561059 SCAPERQ9BY12 1400 aa22.03■■□□□ 1.12
PSME1-208ENST00000561059 MLECQ14165 292 aa22.01■■□□□ 1.11
PSME1-208ENST00000561059 KIF14Q15058 1648 aa22.01■■□□□ 1.11
PSME1-208ENST00000561059 ZFYVE16Q7Z3T8 1539 aa22■■□□□ 1.11
PSME1-208ENST00000561059 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms