RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 RIMBP3Q9UFD9 1639 aa16.08■□□□□ 0.16
RABGGTA-221ENST00000561055 KIAA0586Q9BVV6 1533 aa16.07■□□□□ 0.16
RABGGTA-221ENST00000561055 CTTNBP2Q8WZ74 1663 aa16.06■□□□□ 0.16
RABGGTA-221ENST00000561055 ARHGEF11O15085 1522 aa16.06■□□□□ 0.16
RABGGTA-221ENST00000561055 KIF21BO75037 1637 aa16.05■□□□□ 0.16
RABGGTA-221ENST00000561055 IQGAP2Q13576 1575 aa16■□□□□ 0.15
RABGGTA-221ENST00000561055 JPH4Q96JJ6 628 aa15.99■□□□□ 0.15
RABGGTA-221ENST00000561055 FAM9AQ8IZU1 332 aaPredicted RBP15.97■□□□□ 0.15
RABGGTA-221ENST00000561055 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.14
RABGGTA-221ENST00000561055 UGGT2Q9NYU1 1516 aa15.94■□□□□ 0.14
RABGGTA-221ENST00000561055 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
RABGGTA-221ENST00000561055 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
RABGGTA-221ENST00000561055 GOLGA3Q08378 1498 aa15.89■□□□□ 0.13
RABGGTA-221ENST00000561055 DISP1Q96F81 1524 aa15.87■□□□□ 0.13
RABGGTA-221ENST00000561055 CARMIL2Q6F5E8 1435 aa15.86■□□□□ 0.13
RABGGTA-221ENST00000561055 KIAA0556O60303 1618 aa15.85■□□□□ 0.13
RABGGTA-221ENST00000561055 CYB5RLQ6IPT4 315 aa15.84■□□□□ 0.13
RABGGTA-221ENST00000561055 SAMD9Q5K651 1589 aa15.82■□□□□ 0.12
RABGGTA-221ENST00000561055 TNIKQ9UKE5 1360 aa15.8■□□□□ 0.12
RABGGTA-221ENST00000561055 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.12
RABGGTA-221ENST00000561055 PTPRGP23470 1445 aa15.77■□□□□ 0.11
RABGGTA-221ENST00000561055 EFCAB5A4FU69 1503 aa15.76■□□□□ 0.11
RABGGTA-221ENST00000561055 ADCY10Q96PN6 1610 aa15.73■□□□□ 0.11
RABGGTA-221ENST00000561055 UHRF1BP1LA0JNW5 1464 aa15.71■□□□□ 0.1
RABGGTA-221ENST00000561055 ABCA8O94911 1581 aa15.68■□□□□ 0.1
RABGGTA-221ENST00000561055 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
RABGGTA-221ENST00000561055 ABCC2Q92887 1545 aa15.68■□□□□ 0.1
RABGGTA-221ENST00000561055 UACAQ9BZF9 1416 aa15.68■□□□□ 0.1
RABGGTA-221ENST00000561055 ARHGAP35Q9NRY4 1499 aa15.66■□□□□ 0.1
RABGGTA-221ENST00000561055 P3H3Q8IVL6 736 aa15.63■□□□□ 0.09
RABGGTA-221ENST00000561055 PLB1Q6P1J6 1458 aa15.63■□□□□ 0.09
RABGGTA-221ENST00000561055 KDM5BQ9UGL1 1544 aa15.63■□□□□ 0.09
RABGGTA-221ENST00000561055 FHOD3Q2V2M9 1422 aa15.62■□□□□ 0.09
RABGGTA-221ENST00000561055 RAPGEF6Q8TEU7 1601 aa15.62■□□□□ 0.09
RABGGTA-221ENST00000561055 MAPKBP1O60336 1514 aa15.62■□□□□ 0.09
RABGGTA-221ENST00000561055 LOC105371045A0A1W2PR82 267 aa15.6■□□□□ 0.09
RABGGTA-221ENST00000561055 RANGAP1P46060 587 aaPredicted RBP15.6■□□□□ 0.09
RABGGTA-221ENST00000561055 TTBK1Q5TCY1 1321 aaPredicted RBP15.6■□□□□ 0.09
RABGGTA-221ENST00000561055 ZCCHC11Q5TAX3 1644 aaKnown RBP15.6■□□□□ 0.09
RABGGTA-221ENST00000561055 NPM1P06748 294 aaKnown RBP eCLIP15.59■□□□□ 0.09
RABGGTA-221ENST00000561055 CLIP1P30622 1438 aa15.58■□□□□ 0.08
RABGGTA-221ENST00000561055 FMN1Q68DA7 1419 aa15.58■□□□□ 0.08
RABGGTA-221ENST00000561055 KIF13AQ9H1H9 1805 aa15.57■□□□□ 0.08
RABGGTA-221ENST00000561055 CEP162Q5TB80 1403 aa15.55■□□□□ 0.08
RABGGTA-221ENST00000561055 NUP153P49790 1475 aaKnown RBP15.52■□□□□ 0.08
RABGGTA-221ENST00000561055 ATP10BO94823 1461 aa15.52■□□□□ 0.07
RABGGTA-221ENST00000561055 LRRIQ1Q96JM4 1722 aa15.51■□□□□ 0.07
RABGGTA-221ENST00000561055 HECW1Q76N89 1606 aa15.51■□□□□ 0.07
RABGGTA-221ENST00000561055 ABCC10Q5T3U5 1492 aa15.5■□□□□ 0.07
RABGGTA-221ENST00000561055 DIP2BQ9P265 1576 aa15.49■□□□□ 0.07
RABGGTA-221ENST00000561055 ASXL2Q76L83 1435 aa15.49■□□□□ 0.07
RABGGTA-221ENST00000561055 PCF11O94913 1555 aaKnown RBP15.47■□□□□ 0.07
RABGGTA-221ENST00000561055 GLI2P10070 1586 aa15.47■□□□□ 0.07
RABGGTA-221ENST00000561055 CASKIN1Q8WXD9 1431 aa15.47■□□□□ 0.07
RABGGTA-221ENST00000561055 FYCO1Q9BQS8 1478 aa15.46■□□□□ 0.06
RABGGTA-221ENST00000561055 WDR7Q9Y4E6 1490 aa15.46■□□□□ 0.06
RABGGTA-221ENST00000561055 EPRSP07814 1512 aaKnown RBP15.45■□□□□ 0.06
RABGGTA-221ENST00000561055 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
RABGGTA-221ENST00000561055 MAP3K4Q9Y6R4 1608 aa15.41■□□□□ 0.06
RABGGTA-221ENST00000561055 CDK13Q14004 1512 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-221ENST00000561055 CFAP43Q8NDM7 1665 aa15.41■□□□□ 0.06
RABGGTA-221ENST00000561055 CCDC18Q5T9S5 1454 aa15.4■□□□□ 0.06
RABGGTA-221ENST00000561055 TSPOAP1O95153 1857 aa15.39■□□□□ 0.05
RABGGTA-221ENST00000561055 VPS8Q8N3P4 1428 aa15.38■□□□□ 0.05
RABGGTA-221ENST00000561055 FAM69CQ0P6D2 419 aa15.38■□□□□ 0.05
RABGGTA-221ENST00000561055 ABCA9Q8IUA7 1624 aa15.38■□□□□ 0.05
RABGGTA-221ENST00000561055 PLEKHD1A6NEE1 506 aa15.37■□□□□ 0.05
RABGGTA-221ENST00000561055 PPRC1Q5VV67 1664 aaKnown RBP15.37■□□□□ 0.05
RABGGTA-221ENST00000561055 ARID3CA6NKF2 412 aa15.36■□□□□ 0.05
RABGGTA-221ENST00000561055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
RABGGTA-221ENST00000561055 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
RABGGTA-221ENST00000561055 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-221ENST00000561055 CDK11AQ9UQ88 783 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-221ENST00000561055 KCNH8Q96L42 1107 aa15.31■□□□□ 0.04
RABGGTA-221ENST00000561055 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-221ENST00000561055 MAP3K1Q13233 1512 aa15.31■□□□□ 0.04
RABGGTA-221ENST00000561055 MAGI3Q5TCQ9 1506 aa15.3■□□□□ 0.04
RABGGTA-221ENST00000561055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.3■□□□□ 0.04
RABGGTA-221ENST00000561055 KIF14Q15058 1648 aa15.28■□□□□ 0.04
RABGGTA-221ENST00000561055 CD109Q6YHK3 1445 aa15.28■□□□□ 0.04
RABGGTA-221ENST00000561055 MYO5CQ9NQX4 1742 aa15.28■□□□□ 0.04
RABGGTA-221ENST00000561055 TIAM1Q13009 1591 aa15.28■□□□□ 0.04
RABGGTA-221ENST00000561055 TTC37Q6PGP7 1564 aa15.27■□□□□ 0.03
RABGGTA-221ENST00000561055 TEX14Q8IWB6 1497 aa15.27■□□□□ 0.03
RABGGTA-221ENST00000561055 ARAP3Q8WWN8 1544 aa15.24■□□□□ 0.03
RABGGTA-221ENST00000561055 CDC42BPAQ5VT25 1732 aa15.23■□□□□ 0.03
RABGGTA-221ENST00000561055 EHBP1L1Q8N3D4 1523 aa15.23■□□□□ 0.03
RABGGTA-221ENST00000561055 CDC42BPBQ9Y5S2 1711 aa15.23■□□□□ 0.03
RABGGTA-221ENST00000561055 CFAP74Q9C0B2 1584 aa15.22■□□□□ 0.03
RABGGTA-221ENST00000561055 AEBP2Q6ZN18 517 aaPredicted RBP15.21■□□□□ 0.03
RABGGTA-221ENST00000561055 MTUS2Q5JR59 1369 aa15.21■□□□□ 0.02
RABGGTA-221ENST00000561055 PHLDB1Q86UU1 1377 aa15.21■□□□□ 0.02
RABGGTA-221ENST00000561055 SUPT6HQ7KZ85 1726 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-221ENST00000561055 PLCH2O75038 1416 aa15.2■□□□□ 0.02
RABGGTA-221ENST00000561055 PREX2Q70Z35 1606 aa15.2■□□□□ 0.02
RABGGTA-221ENST00000561055 LRRC9Q6ZRR7 1453 aa15.2■□□□□ 0.02
RABGGTA-221ENST00000561055 NEO1Q92859 1461 aa15.2■□□□□ 0.02
RABGGTA-221ENST00000561055 KDM6BO15054 1643 aa15.19■□□□□ 0.02
RABGGTA-221ENST00000561055 ITSN2Q9NZM3 1697 aa15.16■□□□□ 0.02
RABGGTA-221ENST00000561055 FANCAO15360 1455 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms