RNA–Protein interactions for RNA: ENST00000560828.5

CPNE6-217, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-217ENST00000560828 JPH4Q96JJ6 628 aa29.16■■■□□ 2.26
CPNE6-217ENST00000560828 PRG4Q92954 1404 aaPredicted RBP29.16■■■□□ 2.26
CPNE6-217ENST00000560828 KIAA0586Q9BVV6 1533 aa29.08■■■□□ 2.25
CPNE6-217ENST00000560828 CARMIL1Q5VZK9 1371 aa29.05■■■□□ 2.24
CPNE6-217ENST00000560828 KIF13AQ9H1H9 1805 aa28.91■■■□□ 2.22
CPNE6-217ENST00000560828 RAPGEF2Q9Y4G8 1499 aa28.83■■■□□ 2.21
CPNE6-217ENST00000560828 IQGAP2Q13576 1575 aa28.8■■■□□ 2.2
CPNE6-217ENST00000560828 CARMIL2Q6F5E8 1435 aa28.78■■■□□ 2.2
CPNE6-217ENST00000560828 NPM1P06748 294 aaKnown RBP eCLIP28.77■■■□□ 2.2
CPNE6-217ENST00000560828 ADCY10Q96PN6 1610 aa28.76■■■□□ 2.2
CPNE6-217ENST00000560828 PTPRGP23470 1445 aa28.75■■■□□ 2.19
CPNE6-217ENST00000560828 MAPKBP1O60336 1514 aa28.73■■■□□ 2.19
CPNE6-217ENST00000560828 TNIKQ9UKE5 1360 aa28.73■■■□□ 2.19
CPNE6-217ENST00000560828 AEBP2Q6ZN18 517 aaPredicted RBP28.72■■■□□ 2.19
CPNE6-217ENST00000560828 ABCC10Q5T3U5 1492 aa28.66■■■□□ 2.18
CPNE6-217ENST00000560828 DISP1Q96F81 1524 aa28.66■■■□□ 2.18
CPNE6-217ENST00000560828 UGGT2Q9NYU1 1516 aa28.66■■■□□ 2.18
CPNE6-217ENST00000560828 PRXQ9BXM0 1461 aa28.61■■■□□ 2.17
CPNE6-217ENST00000560828 TTBK1Q5TCY1 1321 aaPredicted RBP28.61■■■□□ 2.17
CPNE6-217ENST00000560828 FAM69CQ0P6D2 419 aa28.6■■■□□ 2.17
CPNE6-217ENST00000560828 ABCC2Q92887 1545 aa28.58■■■□□ 2.17
CPNE6-217ENST00000560828 UHRF1BP1LA0JNW5 1464 aa28.57■■■□□ 2.16
CPNE6-217ENST00000560828 DIP2BQ9P265 1576 aa28.57■■■□□ 2.16
CPNE6-217ENST00000560828 KIAA0556O60303 1618 aa28.54■■■□□ 2.16
CPNE6-217ENST00000560828 UACAQ9BZF9 1416 aa28.54■■■□□ 2.16
CPNE6-217ENST00000560828 CTTNBP2Q8WZ74 1663 aa28.5■■■□□ 2.15
CPNE6-217ENST00000560828 GOLGA3Q08378 1498 aa28.46■■■□□ 2.15
CPNE6-217ENST00000560828 PLB1Q6P1J6 1458 aa28.44■■■□□ 2.14
CPNE6-217ENST00000560828 ASXL2Q76L83 1435 aa28.43■■■□□ 2.14
CPNE6-217ENST00000560828 TSPOAP1O95153 1857 aa28.43■■■□□ 2.14
CPNE6-217ENST00000560828 CSRNP3Q8WYN3 585 aa28.43■■■□□ 2.14
CPNE6-217ENST00000560828 KDM5BQ9UGL1 1544 aa28.42■■■□□ 2.14
CPNE6-217ENST00000560828 EEA1Q15075 1411 aa28.41■■■□□ 2.14
CPNE6-217ENST00000560828 KDM6BO15054 1643 aa28.37■■■□□ 2.13
CPNE6-217ENST00000560828 GLI2P10070 1586 aa28.33■■■□□ 2.13
CPNE6-217ENST00000560828 ZCCHC11Q5TAX3 1644 aaKnown RBP28.3■■■□□ 2.12
CPNE6-217ENST00000560828 ABCA8O94911 1581 aa28.27■■■□□ 2.12
CPNE6-217ENST00000560828 EPRSP07814 1512 aaKnown RBP28.27■■■□□ 2.12
CPNE6-217ENST00000560828 PPRC1Q5VV67 1664 aaKnown RBP28.22■■■□□ 2.11
CPNE6-217ENST00000560828 WDR7Q9Y4E6 1490 aa28.21■■■□□ 2.11
CPNE6-217ENST00000560828 FAM9AQ8IZU1 332 aaPredicted RBP28.2■■■□□ 2.1
CPNE6-217ENST00000560828 SAMD9Q5K651 1589 aa28.18■■■□□ 2.1
CPNE6-217ENST00000560828 MAP3K4Q9Y6R4 1608 aa28.15■■■□□ 2.1
CPNE6-217ENST00000560828 P3H3Q8IVL6 736 aa28.15■■■□□ 2.1
CPNE6-217ENST00000560828 KIF21BO75037 1637 aa28.11■■■□□ 2.09
CPNE6-217ENST00000560828 TEX14Q8IWB6 1497 aa28.11■■■□□ 2.09
CPNE6-217ENST00000560828 CHIC1Q5VXU3 224 aa28.1■■■□□ 2.09
CPNE6-217ENST00000560828 ATP10BO94823 1461 aa28.03■■■□□ 2.08
CPNE6-217ENST00000560828 KDM4FA0A1W2PPD8 638 aa28.02■■■□□ 2.08
CPNE6-217ENST00000560828 KCNH8Q96L42 1107 aa28.01■■■□□ 2.07
CPNE6-217ENST00000560828 CD109Q6YHK3 1445 aa28■■■□□ 2.07
CPNE6-217ENST00000560828 RAPGEF6Q8TEU7 1601 aa28■■■□□ 2.07
CPNE6-217ENST00000560828 MAGI3Q5TCQ9 1506 aa27.99■■■□□ 2.07
CPNE6-217ENST00000560828 RANGAP1P46060 587 aaPredicted RBP27.99■■■□□ 2.07
CPNE6-217ENST00000560828 COL17A1Q9UMD9 1497 aaPredicted RBP27.99■■■□□ 2.07
CPNE6-217ENST00000560828 FHOD3Q2V2M9 1422 aa27.99■■■□□ 2.07
CPNE6-217ENST00000560828 EFCAB5A4FU69 1503 aa27.98■■■□□ 2.07
CPNE6-217ENST00000560828 ARID3CA6NKF2 412 aa27.98■■■□□ 2.07
CPNE6-217ENST00000560828 CFAP43Q8NDM7 1665 aa27.97■■■□□ 2.07
CPNE6-217ENST00000560828 NUP153P49790 1475 aaKnown RBP27.93■■■□□ 2.06
CPNE6-217ENST00000560828 UBTFP17480 764 aaKnown RBP27.87■■■□□ 2.05
CPNE6-217ENST00000560828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.86■■■□□ 2.05
CPNE6-217ENST00000560828 HNRNPUL2Q1KMD3 747 aaKnown RBP27.86■■■□□ 2.05
CPNE6-217ENST00000560828 ADGRL1O94910 1474 aa27.85■■■□□ 2.05
CPNE6-217ENST00000560828 ABCA9Q8IUA7 1624 aa27.83■■■□□ 2.05
CPNE6-217ENST00000560828 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
CPNE6-217ENST00000560828 PHLDB1Q86UU1 1377 aa27.76■■■□□ 2.03
CPNE6-217ENST00000560828 ARAP3Q8WWN8 1544 aa27.76■■■□□ 2.03
CPNE6-217ENST00000560828 PLEKHD1A6NEE1 506 aa27.75■■■□□ 2.03
CPNE6-217ENST00000560828 ARHGAP35Q9NRY4 1499 aa27.74■■■□□ 2.03
CPNE6-217ENST00000560828 FMN1Q68DA7 1419 aa27.74■■■□□ 2.03
CPNE6-217ENST00000560828 NEO1Q92859 1461 aa27.7■■■□□ 2.03
CPNE6-217ENST00000560828 CDK13Q14004 1512 aaKnown RBP27.65■■■□□ 2.02
CPNE6-217ENST00000560828 HECW1Q76N89 1606 aa27.63■■■□□ 2.01
CPNE6-217ENST00000560828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.61■■■□□ 2.01
CPNE6-217ENST00000560828 HECW2Q9P2P5 1572 aa27.6■■■□□ 2.01
CPNE6-217ENST00000560828 ATP1B4Q9UN42 357 aaPredicted RBP27.57■■■□□ 2
CPNE6-217ENST00000560828 RAPGEF3O95398 923 aa27.56■■■□□ 2
CPNE6-217ENST00000560828 FANCAO15360 1455 aa27.55■■■□□ 2
CPNE6-217ENST00000560828 TTC37Q6PGP7 1564 aa27.55■■■□□ 2
CPNE6-217ENST00000560828 CDK11AQ9UQ88 783 aaPredicted RBP27.54■■■□□ 2
CPNE6-217ENST00000560828 CFAP74Q9C0B2 1584 aa27.52■■■□□ 2
CPNE6-217ENST00000560828 FRMPD1Q5SYB0 1578 aa27.52■■■□□ 2
CPNE6-217ENST00000560828 AKNAQ7Z591 1439 aa27.51■■□□□ 1.99
CPNE6-217ENST00000560828 DENND4BO75064 1496 aaPredicted RBP27.49■■□□□ 1.99
CPNE6-217ENST00000560828 PLCH2O75038 1416 aa27.47■■□□□ 1.99
CPNE6-217ENST00000560828 CASKIN1Q8WXD9 1431 aa27.45■■□□□ 1.98
CPNE6-217ENST00000560828 TROQ12816 1431 aaPredicted RBP27.44■■□□□ 1.98
CPNE6-217ENST00000560828 CLIP1P30622 1438 aa27.42■■□□□ 1.98
CPNE6-217ENST00000560828 ILDR1Q86SU0 546 aaPredicted RBP27.42■■□□□ 1.98
CPNE6-217ENST00000560828 KIF14Q15058 1648 aa27.41■■□□□ 1.98
CPNE6-217ENST00000560828 PCF11O94913 1555 aaKnown RBP27.4■■□□□ 1.98
CPNE6-217ENST00000560828 CCDC18Q5T9S5 1454 aa27.4■■□□□ 1.98
CPNE6-217ENST00000560828 RICTORQ6R327 1708 aa27.39■■□□□ 1.98
CPNE6-217ENST00000560828 ZMYM4Q5VZL5 1548 aa27.37■■□□□ 1.97
CPNE6-217ENST00000560828 ARHGEF40Q8TER5 1519 aa27.37■■□□□ 1.97
CPNE6-217ENST00000560828 LRRIQ1Q96JM4 1722 aa27.36■■□□□ 1.97
CPNE6-217ENST00000560828 FYCO1Q9BQS8 1478 aa27.36■■□□□ 1.97
CPNE6-217ENST00000560828 EFCAB2Q5VUJ9 269 aa27.35■■□□□ 1.97
CPNE6-217ENST00000560828 ADAMTSL3P82987 1691 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms