RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 FOXD1Q16676 465 aa19.59■□□□□ 0.73
GABPB1-210ENST00000560825 IGF1RP08069 1367 aa19.58■□□□□ 0.73
GABPB1-210ENST00000560825 CUL7Q14999 1698 aa19.55■□□□□ 0.72
GABPB1-210ENST00000560825 TRHP20396 242 aaPredicted RBP19.54■□□□□ 0.72
GABPB1-210ENST00000560825 KIF27Q86VH2 1401 aa19.53■□□□□ 0.72
GABPB1-210ENST00000560825 PRG4Q92954 1404 aaPredicted RBP19.52■□□□□ 0.71
GABPB1-210ENST00000560825 JPH4Q96JJ6 628 aa19.46■□□□□ 0.71
GABPB1-210ENST00000560825 KIF13AQ9H1H9 1805 aa19.41■□□□□ 0.7
GABPB1-210ENST00000560825 CARMIL1Q5VZK9 1371 aa19.41■□□□□ 0.7
GABPB1-210ENST00000560825 KIAA0586Q9BVV6 1533 aa19.4■□□□□ 0.7
GABPB1-210ENST00000560825 ADCY10Q96PN6 1610 aa19.38■□□□□ 0.69
GABPB1-210ENST00000560825 IQGAP2Q13576 1575 aa19.32■□□□□ 0.68
GABPB1-210ENST00000560825 POTEDQ86YR6 584 aa19.29■□□□□ 0.68
GABPB1-210ENST00000560825 RAPGEF2Q9Y4G8 1499 aa19.27■□□□□ 0.67
GABPB1-210ENST00000560825 DISP1Q96F81 1524 aa19.26■□□□□ 0.67
GABPB1-210ENST00000560825 CTTNBP2Q8WZ74 1663 aa19.25■□□□□ 0.67
GABPB1-210ENST00000560825 TTBK1Q5TCY1 1321 aaPredicted RBP19.24■□□□□ 0.67
GABPB1-210ENST00000560825 DIP2BQ9P265 1576 aa19.21■□□□□ 0.67
GABPB1-210ENST00000560825 MAPKBP1O60336 1514 aa19.2■□□□□ 0.66
GABPB1-210ENST00000560825 UGGT2Q9NYU1 1516 aa19.18■□□□□ 0.66
GABPB1-210ENST00000560825 PTPRGP23470 1445 aa19.17■□□□□ 0.66
GABPB1-210ENST00000560825 KIAA0556O60303 1618 aa19.17■□□□□ 0.66
GABPB1-210ENST00000560825 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
GABPB1-210ENST00000560825 PRXQ9BXM0 1461 aa19.16■□□□□ 0.66
GABPB1-210ENST00000560825 TSPOAP1O95153 1857 aa19.15■□□□□ 0.66
GABPB1-210ENST00000560825 TNIKQ9UKE5 1360 aa19.15■□□□□ 0.66
GABPB1-210ENST00000560825 CARMIL2Q6F5E8 1435 aa19.13■□□□□ 0.65
GABPB1-210ENST00000560825 ABCC2Q92887 1545 aa19.11■□□□□ 0.65
GABPB1-210ENST00000560825 FAM69CQ0P6D2 419 aa19.09■□□□□ 0.65
GABPB1-210ENST00000560825 ZCCHC11Q5TAX3 1644 aaKnown RBP19.07■□□□□ 0.64
GABPB1-210ENST00000560825 NPM1P06748 294 aaKnown RBP eCLIP19.07■□□□□ 0.64
GABPB1-210ENST00000560825 PPRC1Q5VV67 1664 aaKnown RBP19.06■□□□□ 0.64
GABPB1-210ENST00000560825 UACAQ9BZF9 1416 aa19.05■□□□□ 0.64
GABPB1-210ENST00000560825 UHRF1BP1LA0JNW5 1464 aa19.05■□□□□ 0.64
GABPB1-210ENST00000560825 ASXL2Q76L83 1435 aa19.03■□□□□ 0.64
GABPB1-210ENST00000560825 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
GABPB1-210ENST00000560825 KDM5BQ9UGL1 1544 aa19.01■□□□□ 0.63
GABPB1-210ENST00000560825 ABCA8O94911 1581 aa18.98■□□□□ 0.63
GABPB1-210ENST00000560825 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
GABPB1-210ENST00000560825 FAM9AQ8IZU1 332 aaPredicted RBP18.96■□□□□ 0.63
GABPB1-210ENST00000560825 GLI2P10070 1586 aa18.95■□□□□ 0.62
GABPB1-210ENST00000560825 SAMD9Q5K651 1589 aa18.95■□□□□ 0.62
GABPB1-210ENST00000560825 KDM6BO15054 1643 aa18.95■□□□□ 0.62
GABPB1-210ENST00000560825 MAP3K4Q9Y6R4 1608 aa18.94■□□□□ 0.62
GABPB1-210ENST00000560825 EPRSP07814 1512 aaKnown RBP18.93■□□□□ 0.62
GABPB1-210ENST00000560825 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
GABPB1-210ENST00000560825 GOLGA3Q08378 1498 aa18.93■□□□□ 0.62
GABPB1-210ENST00000560825 KIF21BO75037 1637 aa18.86■□□□□ 0.61
GABPB1-210ENST00000560825 COL17A1Q9UMD9 1497 aaPredicted RBP18.86■□□□□ 0.61
GABPB1-210ENST00000560825 ARID3CA6NKF2 412 aa18.85■□□□□ 0.61
GABPB1-210ENST00000560825 RANGAP1P46060 587 aaPredicted RBP18.85■□□□□ 0.61
GABPB1-210ENST00000560825 WDR7Q9Y4E6 1490 aa18.85■□□□□ 0.61
GABPB1-210ENST00000560825 EEA1Q15075 1411 aa18.85■□□□□ 0.61
GABPB1-210ENST00000560825 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.6
GABPB1-210ENST00000560825 RAPGEF6Q8TEU7 1601 aa18.81■□□□□ 0.6
GABPB1-210ENST00000560825 ATP10BO94823 1461 aa18.8■□□□□ 0.6
GABPB1-210ENST00000560825 FHOD3Q2V2M9 1422 aa18.8■□□□□ 0.6
GABPB1-210ENST00000560825 CFAP43Q8NDM7 1665 aa18.78■□□□□ 0.6
GABPB1-210ENST00000560825 KCNH8Q96L42 1107 aa18.76■□□□□ 0.59
GABPB1-210ENST00000560825 NUP153P49790 1475 aaKnown RBP18.74■□□□□ 0.59
GABPB1-210ENST00000560825 KDM4FA0A1W2PPD8 638 aa18.7■□□□□ 0.58
GABPB1-210ENST00000560825 CD109Q6YHK3 1445 aa18.69■□□□□ 0.58
GABPB1-210ENST00000560825 MSH5O43196 834 aa18.69■□□□□ 0.58
GABPB1-210ENST00000560825 ABCA9Q8IUA7 1624 aa18.68■□□□□ 0.58
GABPB1-210ENST00000560825 MAGI3Q5TCQ9 1506 aa18.68■□□□□ 0.58
GABPB1-210ENST00000560825 TEX14Q8IWB6 1497 aa18.68■□□□□ 0.58
GABPB1-210ENST00000560825 EFCAB5A4FU69 1503 aa18.67■□□□□ 0.58
GABPB1-210ENST00000560825 LRRIQ1Q96JM4 1722 aa18.66■□□□□ 0.58
GABPB1-210ENST00000560825 CDK13Q14004 1512 aaKnown RBP18.63■□□□□ 0.57
GABPB1-210ENST00000560825 ARHGAP35Q9NRY4 1499 aa18.63■□□□□ 0.57
GABPB1-210ENST00000560825 UBTFP17480 764 aaKnown RBP18.6■□□□□ 0.57
GABPB1-210ENST00000560825 TTC37Q6PGP7 1564 aa18.58■□□□□ 0.56
GABPB1-210ENST00000560825 ADGRL1O94910 1474 aa18.58■□□□□ 0.56
GABPB1-210ENST00000560825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
GABPB1-210ENST00000560825 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
GABPB1-210ENST00000560825 FRMPD1Q5SYB0 1578 aa18.56■□□□□ 0.56
GABPB1-210ENST00000560825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.55■□□□□ 0.562e-9■■■■■ 40.7
GABPB1-210ENST00000560825 ARAP3Q8WWN8 1544 aa18.54■□□□□ 0.56
GABPB1-210ENST00000560825 KIF14Q15058 1648 aa18.5■□□□□ 0.55
GABPB1-210ENST00000560825 HECW1Q76N89 1606 aa18.5■□□□□ 0.55
GABPB1-210ENST00000560825 RICTORQ6R327 1708 aa18.48■□□□□ 0.55
GABPB1-210ENST00000560825 RAPGEF3O95398 923 aa18.48■□□□□ 0.55
GABPB1-210ENST00000560825 PCF11O94913 1555 aaKnown RBP18.47■□□□□ 0.55
GABPB1-210ENST00000560825 SIGLEC1Q9BZZ2 1709 aa18.46■□□□□ 0.55
GABPB1-210ENST00000560825 NEO1Q92859 1461 aa18.45■□□□□ 0.54
GABPB1-210ENST00000560825 FMN1Q68DA7 1419 aa18.44■□□□□ 0.54
GABPB1-210ENST00000560825 PLEKHD1A6NEE1 506 aa18.44■□□□□ 0.54
GABPB1-210ENST00000560825 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
GABPB1-210ENST00000560825 MYO5CQ9NQX4 1742 aa18.42■□□□□ 0.54
GABPB1-210ENST00000560825 FANCAO15360 1455 aa18.41■□□□□ 0.54
GABPB1-210ENST00000560825 AKNAQ7Z591 1439 aa18.39■□□□□ 0.53
GABPB1-210ENST00000560825 CFAP74Q9C0B2 1584 aa18.38■□□□□ 0.53
GABPB1-210ENST00000560825 CDC42BPBQ9Y5S2 1711 aa18.37■□□□□ 0.53
GABPB1-210ENST00000560825 ADAMTSL3P82987 1691 aa18.36■□□□□ 0.53
GABPB1-210ENST00000560825 PHLDB1Q86UU1 1377 aa18.35■□□□□ 0.53
GABPB1-210ENST00000560825 ARHGEF40Q8TER5 1519 aa18.35■□□□□ 0.53
GABPB1-210ENST00000560825 CASKIN1Q8WXD9 1431 aa18.34■□□□□ 0.53
GABPB1-210ENST00000560825 BCORL1Q5H9F3 1711 aa18.34■□□□□ 0.53
GABPB1-210ENST00000560825 PLCH2O75038 1416 aa18.33■□□□□ 0.53
GABPB1-210ENST00000560825 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms