RNA–Protein interactions for RNA: ENST00000560771.5

AP3S2-213, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 3

Gene AP3S2, Length 740 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-213ENST00000560771 ARHGAP35Q9NRY4 1499 aa21.52■■□□□ 1.03
AP3S2-213ENST00000560771 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
AP3S2-213ENST00000560771 SYNJ2O15056 1496 aa21.49■■□□□ 1.03
AP3S2-213ENST00000560771 APLP2Q06481 763 aa21.48■■□□□ 1.03
AP3S2-213ENST00000560771 EFCAB5A4FU69 1503 aa21.47■■□□□ 1.03
AP3S2-213ENST00000560771 GRIN2AQ12879 1464 aa21.46■■□□□ 1.03
AP3S2-213ENST00000560771 FBLN2P98095 1184 aa21.45■■□□□ 1.02
AP3S2-213ENST00000560771 TRIM26Q12899 539 aaPredicted RBP21.44■■□□□ 1.02
AP3S2-213ENST00000560771 PPARGC1BQ86YN6 1023 aaKnown RBP21.42■■□□□ 1.02
AP3S2-213ENST00000560771 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
AP3S2-213ENST00000560771 P3H3Q8IVL6 736 aa21.39■■□□□ 1.01
AP3S2-213ENST00000560771 PCGF6Q9BYE7 350 aa21.39■■□□□ 1.01
AP3S2-213ENST00000560771 KIAA0586Q9BVV6 1533 aa21.37■■□□□ 1.01
AP3S2-213ENST00000560771 FHOD3Q2V2M9 1422 aa21.35■■□□□ 1.01
AP3S2-213ENST00000560771 SAMD9Q5K651 1589 aa21.32■■□□□ 1
AP3S2-213ENST00000560771 FMN1Q68DA7 1419 aa21.3■■□□□ 1
AP3S2-213ENST00000560771 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
AP3S2-213ENST00000560771 NUP160Q12769 1436 aa21.29■■□□□ 1
AP3S2-213ENST00000560771 UGGT2Q9NYU1 1516 aa21.29■■□□□ 1
AP3S2-213ENST00000560771 CEP170Q5SW79 1584 aa21.28■■□□□ 1
AP3S2-213ENST00000560771 ATP1B4Q9UN42 357 aaPredicted RBP21.24■□□□□ 0.99
AP3S2-213ENST00000560771 CASKIN1Q8WXD9 1431 aa21.22■□□□□ 0.99
AP3S2-213ENST00000560771 FYCO1Q9BQS8 1478 aa21.22■□□□□ 0.99
AP3S2-213ENST00000560771 PCF11O94913 1555 aaKnown RBP21.2■□□□□ 0.98
AP3S2-213ENST00000560771 MAP3K1Q13233 1512 aa21.19■□□□□ 0.98
AP3S2-213ENST00000560771 CARMIL2Q6F5E8 1435 aa21.18■□□□□ 0.98
AP3S2-213ENST00000560771 CHD1O14646 1710 aa21.18■□□□□ 0.98
AP3S2-213ENST00000560771 JPH4Q96JJ6 628 aa21.17■□□□□ 0.98
AP3S2-213ENST00000560771 KIAA0556O60303 1618 aa21.16■□□□□ 0.98
AP3S2-213ENST00000560771 DISP1Q96F81 1524 aa21.15■□□□□ 0.98
AP3S2-213ENST00000560771 TIAM1Q13009 1591 aa21.14■□□□□ 0.97
AP3S2-213ENST00000560771 KANK4Q5T7N3 995 aaPredicted RBP21.12■□□□□ 0.97
AP3S2-213ENST00000560771 CFAP43Q8NDM7 1665 aa21.07■□□□□ 0.96
AP3S2-213ENST00000560771 LRRC9Q6ZRR7 1453 aa21.06■□□□□ 0.96
AP3S2-213ENST00000560771 HECW1Q76N89 1606 aa21.05■□□□□ 0.96
AP3S2-213ENST00000560771 PRG4Q92954 1404 aaPredicted RBP21.04■□□□□ 0.96
AP3S2-213ENST00000560771 CCDC18Q5T9S5 1454 aa21.04■□□□□ 0.96
AP3S2-213ENST00000560771 MTUS2Q5JR59 1369 aa20.98■□□□□ 0.95
AP3S2-213ENST00000560771 CLASP1Q7Z460 1538 aa20.97■□□□□ 0.95
AP3S2-213ENST00000560771 SHROOM2Q13796 1616 aa20.96■□□□□ 0.95
AP3S2-213ENST00000560771 RAPGEF6Q8TEU7 1601 aa20.96■□□□□ 0.95
AP3S2-213ENST00000560771 EPRSP07814 1512 aaKnown RBP20.95■□□□□ 0.94
AP3S2-213ENST00000560771 PTPRGP23470 1445 aa20.94■□□□□ 0.94
AP3S2-213ENST00000560771 EHBP1L1Q8N3D4 1523 aa20.9■□□□□ 0.94
AP3S2-213ENST00000560771 NUP153P49790 1475 aaKnown RBP20.9■□□□□ 0.94
AP3S2-213ENST00000560771 PLB1Q6P1J6 1458 aa20.9■□□□□ 0.94
AP3S2-213ENST00000560771 ARID3CA6NKF2 412 aa20.9■□□□□ 0.94
AP3S2-213ENST00000560771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.9■□□□□ 0.94
AP3S2-213ENST00000560771 HNRNPUL2Q1KMD3 747 aaKnown RBP20.9■□□□□ 0.94
AP3S2-213ENST00000560771 CDK11AQ9UQ88 783 aaPredicted RBP20.9■□□□□ 0.94
AP3S2-213ENST00000560771 LRRIQ1Q96JM4 1722 aa20.89■□□□□ 0.93
AP3S2-213ENST00000560771 RRBP1Q9P2E9 1410 aaKnown RBP20.88■□□□□ 0.93
AP3S2-213ENST00000560771 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
AP3S2-213ENST00000560771 CDK13Q14004 1512 aaKnown RBP20.88■□□□□ 0.93
AP3S2-213ENST00000560771 CCNB3Q8WWL7 1395 aa20.86■□□□□ 0.93
AP3S2-213ENST00000560771 ABCA8O94911 1581 aa20.85■□□□□ 0.93
AP3S2-213ENST00000560771 PHLDB1Q86UU1 1377 aa20.85■□□□□ 0.93
AP3S2-213ENST00000560771 SUPT6HQ7KZ85 1726 aaKnown RBP20.82■□□□□ 0.92
AP3S2-213ENST00000560771 NCOA2Q15596 1464 aa20.81■□□□□ 0.92
AP3S2-213ENST00000560771 ERCC6L2Q5T890 1561 aa20.8■□□□□ 0.92
AP3S2-213ENST00000560771 UACAQ9BZF9 1416 aa20.79■□□□□ 0.92
AP3S2-213ENST00000560771 MAGI3Q5TCQ9 1506 aa20.79■□□□□ 0.92
AP3S2-213ENST00000560771 FAM50AQ14320 339 aaKnown RBP20.76■□□□□ 0.91
AP3S2-213ENST00000560771 PLEKHD1A6NEE1 506 aa20.74■□□□□ 0.91
AP3S2-213ENST00000560771 TROQ12816 1431 aaPredicted RBP20.74■□□□□ 0.91
AP3S2-213ENST00000560771 MYOM3Q5VTT5 1437 aa20.74■□□□□ 0.91
AP3S2-213ENST00000560771 FGD6Q6ZV73 1430 aa20.73■□□□□ 0.91
AP3S2-213ENST00000560771 HRCP23327 699 aa20.73■□□□□ 0.91
AP3S2-213ENST00000560771 ATP10BO94823 1461 aa20.73■□□□□ 0.91
AP3S2-213ENST00000560771 ARHGEF11O15085 1522 aa20.72■□□□□ 0.91
AP3S2-213ENST00000560771 ABCC2Q92887 1545 aa20.71■□□□□ 0.91
AP3S2-213ENST00000560771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.71■□□□□ 0.91
AP3S2-213ENST00000560771 ITGAEP38570 1179 aa20.7■□□□□ 0.9
AP3S2-213ENST00000560771 UHRF1BP1LA0JNW5 1464 aa20.67■□□□□ 0.9
AP3S2-213ENST00000560771 CCER1Q8TC90 406 aaPredicted RBP20.65■□□□□ 0.9
AP3S2-213ENST00000560771 MIA2Q96PC5 1412 aa20.64■□□□□ 0.89
AP3S2-213ENST00000560771 ZEB1P37275 1124 aaPredicted RBP20.63■□□□□ 0.89
AP3S2-213ENST00000560771 KIF14Q15058 1648 aa20.61■□□□□ 0.89
AP3S2-213ENST00000560771 ADCY10Q96PN6 1610 aa20.61■□□□□ 0.89
AP3S2-213ENST00000560771 PTPN23Q9H3S7 1636 aa20.6■□□□□ 0.89
AP3S2-213ENST00000560771 TCOF1Q13428 1488 aaKnown RBP20.58■□□□□ 0.89
AP3S2-213ENST00000560771 KDM5BQ9UGL1 1544 aa20.56■□□□□ 0.88
AP3S2-213ENST00000560771 CFDP1Q9UEE9 299 aaPredicted RBP20.55■□□□□ 0.88
AP3S2-213ENST00000560771 ITSN2Q9NZM3 1697 aa20.54■□□□□ 0.88
AP3S2-213ENST00000560771 ZCCHC11Q5TAX3 1644 aaKnown RBP20.53■□□□□ 0.88
AP3S2-213ENST00000560771 GPATCH8Q9UKJ3 1502 aaKnown RBP20.52■□□□□ 0.87
AP3S2-213ENST00000560771 ABCC10Q5T3U5 1492 aa20.5■□□□□ 0.87
AP3S2-213ENST00000560771 NPM1P06748 294 aaKnown RBP eCLIP20.5■□□□□ 0.87
AP3S2-213ENST00000560771 SETD5Q9C0A6 1442 aa20.49■□□□□ 0.87
AP3S2-213ENST00000560771 KCNH8Q96L42 1107 aa20.47■□□□□ 0.87
AP3S2-213ENST00000560771 ZNF777Q9ULD5 760 aaPredicted RBP20.47■□□□□ 0.87
AP3S2-213ENST00000560771 CAMSAP2Q08AD1 1489 aa20.44■□□□□ 0.86
AP3S2-213ENST00000560771 RAB3GAP2Q9H2M9 1393 aa20.44■□□□□ 0.86
AP3S2-213ENST00000560771 ZNF644Q9H582 1327 aaPredicted RBP20.43■□□□□ 0.86
AP3S2-213ENST00000560771 PTPRKQ15262 1439 aa20.42■□□□□ 0.86
AP3S2-213ENST00000560771 WDR7Q9Y4E6 1490 aa20.41■□□□□ 0.86
AP3S2-213ENST00000560771 DAPK1P53355 1430 aa20.4■□□□□ 0.86
AP3S2-213ENST00000560771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.4■□□□□ 0.86
AP3S2-213ENST00000560771 CDC42BPAQ5VT25 1732 aa20.39■□□□□ 0.86
AP3S2-213ENST00000560771 HFM1A2PYH4 1435 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms